• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8049M02.5
        

               
Conread position:
               
33-550
               

               
Cow position:
               
chr21:31701617-31702139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
41-550
               

               
Cow position:
               
chr21:19195841-19196351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
46-467
               

               
Cow position:
               
chr21:16915101-16914669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
46-547
               

               
Cow position:
               
chr21:17184231-17183741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
334, 19
               

               
Conread position:
               
46-552
               

               
Cow position:
               
chr21:27568872-27569343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 26
               

               
Conread position:
               
46-562
               

               
Cow position:
               
chr21:10004575-10005083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 24
               

               
Conread position:
               
47-550
               

               
Cow position:
               
chr21:34390667-34391153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
47-550
               

               
Cow position:
               
chr21:35569055-35569567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
212, 31
               

               
Conread position:
               
47-552
               

               
Cow position:
               
chr21:5392220-5392727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
48-437
               

               
Cow position:
               
chr21:36910235-36909858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
330, 24
               

               
Conread position:
               
48-550
               

               
Cow position:
               
chr21:4400119-4399616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
49-550
               

               
Cow position:
               
chr21:29001830-29002345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 190
               

               
Conread position:
               
49-551
               

               
Cow position:
               
chr21:30249893-30250392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
50-537
               

               
Cow position:
               
chr21:44672061-44671581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
54-365
               

               
Cow position:
               
chr21:30980282-30980578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
269, 11
               

               
Conread position:
               
54-551
               

               
Cow position:
               
chr21:42384812-42384321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 23
               

               
Conread position:
               
57-419
               

               
Cow position:
               
chr21:12339919-12339581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
276, 24
               

               
Conread position:
               
58-549
               

               
Cow position:
               
chr21:13488831-13488337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 75
               

               
Conread position:
               
62-506
               

               
Cow position:
               
chr21:11027060-11027499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
62-552
               

               
Cow position:
               
chr21:37299757-37299280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 20
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr21:19359873-19360167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
63-496
               

               
Cow position:
               
chr21:20260024-20260452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
63-506
               

               
Cow position:
               
chr21:9301529-9301067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
65-530
               

               
Cow position:
               
chr21:44825575-44826049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
65-549
               

               
Cow position:
               
chr21:38918503-38918033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
65-550
               

               
Cow position:
               
chr21:4281587-4282051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
305, 35
               

               
Conread position:
               
65-550
               

               
Cow position:
               
chr21:11143215-11143703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
66-389
               

               
Cow position:
               
chr21:45835091-45835425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
66-533
               

               
Cow position:
               
chr21:42841317-42841761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
261, 67
               

               
Conread position:
               
66-552
               

               
Cow position:
               
chr21:34564920-34565398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
66-554
               

               
Cow position:
               
chr21:641881-641397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
68-520
               

               
Cow position:
               
chr21:34654364-34653927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
68-552
               

               
Cow position:
               
chr21:46264457-46263991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 65
               

               
Conread position:
               
69-311
               

               
Cow position:
               
chr21:15012723-15012493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
70-552
               

               
Cow position:
               
chr21:33351036-33350557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
72-433
               

               
Cow position:
               
chr21:40266414-40266049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
74-389
               

               
Cow position:
               
chr21:29014276-29014583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
78-550
               

               
Cow position:
               
chr21:24296479-24296947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
81-329
               

               
Cow position:
               
chr21:39394028-39393784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
84-550
               

               
Cow position:
               
chr21:9311335-9310860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
87-483
               

               
Cow position:
               
chr21:23979905-23980305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
87-535
               

               
Cow position:
               
chr21:41621406-41620949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
90-551
               

               
Cow position:
               
chr21:13089199-13089666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
91-354
               

               
Cow position:
               
chr21:36682597-36682332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
91-365
               

               
Cow position:
               
chr21:71858-71585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
91-385
               

               
Cow position:
               
chr21:8426714-8426426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
248, 60
               

               
Conread position:
               
91-454
               

               
Cow position:
               
chr21:45906347-45906714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
91-474
               

               
Cow position:
               
chr21:12916145-12916539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
91-536
               

               
Cow position:
               
chr21:44251570-44251997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
91-550
               

               
Cow position:
               
chr21:24858587-24858128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
91-552
               

               
Cow position:
               
chr21:6051776-6051321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
264, 69
               

               
Conread position:
               
91-565
               

               
Cow position:
               
chr21:34010121-34010594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
91-588
               

               
Cow position:
               
chr21:23535985-23535490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
92-335
               

               
Cow position:
               
chr21:24875622-24875381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
190, 49
               

               
Conread position:
               
94-524
               

               
Cow position:
               
chr21:41590298-41590716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
94-550
               

               
Cow position:
               
chr21:14452501-14452047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
95-558
               

               
Cow position:
               
chr21:28924376-28923934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
97-334
               

               
Cow position:
               
chr21:16498780-16498550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
97-558
               

               
Cow position:
               
chr21:41156138-41155670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
98-537
               

               
Cow position:
               
chr21:11644702-11645141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 43
               

               
Conread position:
               
98-549
               

               
Cow position:
               
chr21:22718519-22718963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
139, 43
               

               
Conread position:
               
101-536
               

               
Cow position:
               
chr21:29069061-29069500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
109-527
               

               
Cow position:
               
chr21:39401839-39401432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
110-551
               

               
Cow position:
               
chr21:11739867-11740316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
126-521
               

               
Cow position:
               
chr21:45920825-45921215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
133-564
               

               
Cow position:
               
chr21:18800298-18800728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 203
               

               
Conread position:
               
134-552
               

               
Cow position:
               
chr21:27229564-27229980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
135-537
               

               
Cow position:
               
chr21:33563232-33562843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
282, 11
               

               
Conread position:
               
135-558
               

               
Cow position:
               
chr21:28626467-28626049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
136-534
               

               
Cow position:
               
chr21:13738771-13738399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
138-535
               

               
Cow position:
               
chr21:42135394-42135794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 16
               

               
Conread position:
               
144-552
               

               
Cow position:
               
chr21:12801522-12801929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 251
               

               
Conread position:
               
145-258
               

               
Cow position:
               
chr21:40573838-40573952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
145-364
               

               
Cow position:
               
chr21:7268662-7268882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 124
               

               
Conread position:
               
145-389
               

               
Cow position:
               
chr21:734809-734573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
145-520
               

               
Cow position:
               
chr21:10633423-10633796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
193, 39
               

               
Conread position:
               
145-530
               

               
Cow position:
               
chr21:27624921-27624547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 176
               

               
Conread position:
               
145-536
               

               
Cow position:
               
chr21:42413876-42414274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
145-550
               

               
Cow position:
               
chr21:2926987-2927386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
158, 70
               

               
Conread position:
               
145-551
               

               
Cow position:
               
chr21:42940441-42940042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
145-558
               

               
Cow position:
               
chr21:702945-703358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
146-519
               

               
Cow position:
               
chr21:24642729-24642364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
200, 41
               

               
Conread position:
               
146-550
               

               
Cow position:
               
chr21:16696590-16696187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
148-482
               

               
Cow position:
               
chr21:40168410-40168752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
149-527
               

               
Cow position:
               
chr21:26245126-26244768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
225, 31
               

               
Conread position:
               
149-534
               

               
Cow position:
               
chr21:23321862-23322253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
149-552
               

               
Cow position:
               
chr21:36795821-36795417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 308
               

               
Conread position:
               
150-525
               

               
Cow position:
               
chr21:32297304-32297671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 160
               

               
Conread position:
               
150-550
               

               
Cow position:
               
chr21:41598026-41597632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
152-531
               

               
Cow position:
               
chr21:3818419-3818050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
228, 35
               

               
Conread position:
               
152-537
               

               
Cow position:
               
chr21:18790355-18790728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
194, 50
               

               
Conread position:
               
152-547
               

               
Cow position:
               
chr21:4276388-4276774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
152-548
               

               
Cow position:
               
chr21:33931-33540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
152-550
               

               
Cow position:
               
chr21:11114922-11114528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
153-360
               

               
Cow position:
               
chr21:11057667-11057870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 111
               

               
Conread position:
               
153-552
               

               
Cow position:
               
chr21:13365560-13365156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
155-536
               

               
Cow position:
               
chr21:7581697-7582081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 32
               

               
Conread position:
               
155-552
               

               
Cow position:
               
chr21:39888529-39888929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
156-322
               

               
Cow position:
               
chr21:5341888-5342051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
157-477
               

               
Cow position:
               
chr21:35437285-35437580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
157-484
               

               
Cow position:
               
chr21:47244-46919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
157-552
               

               
Cow position:
               
chr21:47763914-47764297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
221, 27
               

               
Conread position:
               
158-526
               

               
Cow position:
               
chr21:10114129-10114490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
159-411
               

               
Cow position:
               
chr21:41522211-41522457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
206, 28
               

               
Conread position:
               
159-558
               

               
Cow position:
               
chr21:41974170-41974571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
161-403
               

               
Cow position:
               
chr21:868722-868967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
169, 13
               

               
Conread position:
               
161-552
               

               
Cow position:
               
chr21:29485184-29484799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
163-534
               

               
Cow position:
               
chr21:13127899-13128263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
165-508
               

               
Cow position:
               
chr21:42007262-42007603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
173, 125
               

               
Conread position:
               
165-534
               

               
Cow position:
               
chr21:10264232-10263871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 51
               

               
Conread position:
               
165-536
               

               
Cow position:
               
chr21:36297690-36297307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 18
               

               
Conread position:
               
165-552
               

               
Cow position:
               
chr21:14464783-14464392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
165-555
               

               
Cow position:
               
chr21:9990708-9990326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
166-550
               

               
Cow position:
               
chr21:17511978-17511593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
166-550
               

               
Cow position:
               
chr21:22861196-22860819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
167-506
               

               
Cow position:
               
chr21:957866-957526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 20
               

               
Conread position:
               
167-558
               

               
Cow position:
               
chr21:37480161-37479764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
168-550
               

               
Cow position:
               
chr21:10118765-10118370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
169-453
               

               
Cow position:
               
chr21:30835557-30835270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
169-515
               

               
Cow position:
               
chr21:20153152-20152794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
169-552
               

               
Cow position:
               
chr21:1591753-1591366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
169-567
               

               
Cow position:
               
chr21:22856416-22856015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
170-384
               

               
Cow position:
               
chr21:28030481-28030269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
166, 17
               

               
Conread position:
               
170-417
               

               
Cow position:
               
chr21:829016-829258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
170-512
               

               
Cow position:
               
chr21:30222538-30222196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
170-536
               

               
Cow position:
               
chr21:29213961-29214320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
170-536
               

               
Cow position:
               
chr21:40899536-40899165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
170-538
               

               
Cow position:
               
chr21:3360822-3361188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
170-550
               

               
Cow position:
               
chr21:13034841-13035232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
170-550
               

               
Cow position:
               
chr21:18568443-18568834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
171-550
               

               
Cow position:
               
chr21:33264040-33263665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
171-550
               

               
Cow position:
               
chr21:46912741-46912361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
171-552
               

               
Cow position:
               
chr21:23587073-23586691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 33
               

               
Conread position:
               
172-330
               

               
Cow position:
               
chr21:22851111-22850957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
172-433
               

               
Cow position:
               
chr21:8349519-8349256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
158, 15
               

               
Conread position:
               
172-536
               

               
Cow position:
               
chr21:30592118-30592475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 15
               

               
Conread position:
               
172-537
               

               
Cow position:
               
chr21:44565531-44565874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
173-550
               

               
Cow position:
               
chr21:23568422-23568025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
174-353
               

               
Cow position:
               
chr21:21615973-21615795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr21:19240679-19240877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr21:41579945-41579579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
168, 13
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr21:27521147-27521497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
174-535
               

               
Cow position:
               
chr21:42501242-42500862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
174-537
               

               
Cow position:
               
chr21:643517-643161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 144
               

               
Conread position:
               
174-552
               

               
Cow position:
               
chr21:17642793-17643155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
174-552
               

               
Cow position:
               
chr21:32559176-32559539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 13
               

               
Conread position:
               
176-354
               

               
Cow position:
               
chr21:19868768-19868946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
165, 11
               

               
Conread position:
               
176-364
               

               
Cow position:
               
chr21:9027506-9027313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
176-537
               

               
Cow position:
               
chr21:17193560-17193932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 295
               

               
Conread position:
               
176-559
               

               
Cow position:
               
chr21:3585178-3585554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
178-338
               

               
Cow position:
               
chr21:20163896-20163734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
178-436
               

               
Cow position:
               
chr21:4280490-4280747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
178-459
               

               
Cow position:
               
chr21:45262623-45262910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
157, 192
               

               
Conread position:
               
178-537
               

               
Cow position:
               
chr21:30848754-30849111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
178-538
               

               
Cow position:
               
chr21:31691669-31691305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 85
               

               
Conread position:
               
178-552
               

               
Cow position:
               
chr21:7673307-7672948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
150, 82
               

               
Conread position:
               
178-554
               

               
Cow position:
               
chr21:27863325-27863706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
179-552
               

               
Cow position:
               
chr21:42348510-42348863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 24
               

               
Conread position:
               
180-335
               

               
Cow position:
               
chr21:46451771-46451922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
180-365
               

               
Cow position:
               
chr21:41046991-41046804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 93
               

               
Conread position:
               
180-468
               

               
Cow position:
               
chr21:10673306-10673024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
180-504
               

               
Cow position:
               
chr21:938202-937899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
180-511
               

               
Cow position:
               
chr21:29978577-29978907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
215, 7
               

               
Conread position:
               
180-534
               

               
Cow position:
               
chr21:28989799-28989443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
180-536
               

               
Cow position:
               
chr21:15976815-15976470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
180-550
               

               
Cow position:
               
chr21:39403340-39403724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
180-552
               

               
Cow position:
               
chr21:46848943-46849308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
94, 105
               

               
Conread position:
               
181-536
               

               
Cow position:
               
chr21:20160858-20160512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
167, 12
               

               
Conread position:
               
181-536
               

               
Cow position:
               
chr21:45850525-45850882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
181-537
               

               
Cow position:
               
chr21:32339558-32339909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
197, 6
               

               
Conread position:
               
181-550
               

               
Cow position:
               
chr21:82249-81887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 6
               

               
Conread position:
               
181-550
               

               
Cow position:
               
chr21:33210372-33210015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 137
               

               
Conread position:
               
181-552
               

               
Cow position:
               
chr21:396049-395691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 6
               

               
Conread position:
               
181-552
               

               
Cow position:
               
chr21:5153802-5153432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
149, 13
               

               
Conread position:
               
181-552
               

               
Cow position:
               
chr21:9416431-9416057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
182-516
               

               
Cow position:
               
chr21:12301326-12301654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
182-543
               

               
Cow position:
               
chr21:26647835-26648184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
182-552
               

               
Cow position:
               
chr21:33982628-33982995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 12
               

               
Conread position:
               
183-537
               

               
Cow position:
               
chr21:47464937-47465293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 59
               

               
Conread position:
               
186-550
               

               
Cow position:
               
chr21:18828123-18828492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
186-552
               

               
Cow position:
               
chr21:28733735-28734097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
187-463
               

               
Cow position:
               
chr21:8206948-8206670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr21:46551924-46552217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 227
               

               
Conread position:
               
187-503
               

               
Cow position:
               
chr21:12461788-12462109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 288
               

               
Conread position:
               
187-535
               

               
Cow position:
               
chr21:34740022-34739677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 232
               

               
Conread position:
               
187-549
               

               
Cow position:
               
chr21:31662645-31662278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 353
               

               
Conread position:
               
187-550
               

               
Cow position:
               
chr21:45356011-45355653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
187-550
               

               
Cow position:
               
chr21:46242063-46242422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
188-435
               

               
Cow position:
               
chr21:47719126-47719373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
188-437
               

               
Cow position:
               
chr21:16570076-16569825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
161, 21
               

               
Conread position:
               
188-453
               

               
Cow position:
               
chr21:6998124-6997846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
188-456
               

               
Cow position:
               
chr21:44658744-44658487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
201, 75
               

               
Conread position:
               
188-494
               

               
Cow position:
               
chr21:12723328-12723027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 75
               

               
Conread position:
               
188-505
               

               
Cow position:
               
chr21:48233988-48234299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
188-534
               

               
Cow position:
               
chr21:25764812-25764465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
188-537
               

               
Cow position:
               
chr21:28810085-28810435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
188-539
               

               
Cow position:
               
chr21:21169319-21169669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
198, 70
               

               
Conread position:
               
188-548
               

               
Cow position:
               
chr21:802140-802475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
188-550
               

               
Cow position:
               
chr21:6713346-6713721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
188-550
               

               
Cow position:
               
chr21:45473581-45473941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
186, 149
               

               
Conread position:
               
188-551
               

               
Cow position:
               
chr21:28191209-28190844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 88
               

               
Conread position:
               
188-559
               

               
Cow position:
               
chr21:4723658-4723287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
188-559
               

               
Cow position:
               
chr21:40589305-40589675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
192-459
               

               
Cow position:
               
chr21:10561411-10561682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
192-538
               

               
Cow position:
               
chr21:23672918-23672570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
186, 84
               

               
Conread position:
               
192-550
               

               
Cow position:
               
chr21:25383199-25382826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 262
               

               
Conread position:
               
193-437
               

               
Cow position:
               
chr21:44214298-44214048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 73
               

               
Conread position:
               
193-527
               

               
Cow position:
               
chr21:47760940-47760613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
194-552
               

               
Cow position:
               
chr21:19258989-19258641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 64
               

               
Conread position:
               
196-406
               

               
Cow position:
               
chr21:22014359-22014142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
196-472
               

               
Cow position:
               
chr21:35354702-35354422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
196-533
               

               
Cow position:
               
chr21:28211360-28211028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
196-549
               

               
Cow position:
               
chr21:15911569-15911218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 71
               

               
Conread position:
               
196-550
               

               
Cow position:
               
chr21:38121270-38120924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 227
               

               
Conread position:
               
196-552
               

               
Cow position:
               
chr21:31253702-31253350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
184, 79
               

               
Conread position:
               
196-580
               

               
Cow position:
               
chr21:18941666-18942043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
197-477
               

               
Cow position:
               
chr21:20032670-20032953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
170, 150
               

               
Conread position:
               
198-464
               

               
Cow position:
               
chr21:9940023-9940298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
200-537
               

               
Cow position:
               
chr21:3763576-3763910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
200-537
               

               
Cow position:
               
chr21:45330442-45330780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
188, 73
               

               
Conread position:
               
201-365
               

               
Cow position:
               
chr21:20183235-20183071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
127, 133
               

               
Conread position:
               
202-535
               

               
Cow position:
               
chr21:36643067-36642737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 129
               

               
Conread position:
               
202-550
               

               
Cow position:
               
chr21:42540058-42540403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 167
               

               
Conread position:
               
203-481
               

               
Cow position:
               
chr21:10240329-10240051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
203-550
               

               
Cow position:
               
chr21:13169316-13168967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
203-550
               

               
Cow position:
               
chr21:24598820-24598476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
203-550
               

               
Cow position:
               
chr21:30990125-30990451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 55
               

               
Conread position:
               
203-550
               

               
Cow position:
               
chr21:38449287-38449635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
203-550
               

               
Cow position:
               
chr21:38900935-38900590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
183, 39
               

               
Conread position:
               
204-452
               

               
Cow position:
               
chr21:31090274-31090511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
204-482
               

               
Cow position:
               
chr21:20418521-20418806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
206-536
               

               
Cow position:
               
chr21:23822316-23821996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
209-558
               

               
Cow position:
               
chr21:18850068-18850411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 229
               

               
Conread position:
               
212-503
               

               
Cow position:
               
chr21:11360189-11359899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
212-534
               

               
Cow position:
               
chr21:43357103-43357430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
212-550
               

               
Cow position:
               
chr21:30606933-30607271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 212
               

               
Conread position:
               
214-536
               

               
Cow position:
               
chr21:10040526-10040852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
215-519
               

               
Cow position:
               
chr21:9477313-9477004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
8, 12
               

               
Conread position:
               
215-526
               

               
Cow position:
               
chr21:6909728-6910044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
215-535
               

               
Cow position:
               
chr21:5970688-5971008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
215-550
               

               
Cow position:
               
chr21:11137496-11137833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
215-550
               

               
Cow position:
               
chr21:13316537-13316200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
215-550
               

               
Cow position:
               
chr21:39770973-39771317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
215-550
               

               
Cow position:
               
chr21:40134307-40133972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
8, 12
               

               
Conread position:
               
215-550
               

               
Cow position:
               
chr21:43237123-43236780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
215-555
               

               
Cow position:
               
chr21:10493931-10493589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
216-362
               

               
Cow position:
               
chr21:12104515-12104367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
216-527
               

               
Cow position:
               
chr21:16187658-16187970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
216-536
               

               
Cow position:
               
chr21:37344952-37345273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
164, 85
               

               
Conread position:
               
216-536
               

               
Cow position:
               
chr21:41878618-41878305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
216-541
               

               
Cow position:
               
chr21:13754935-13754626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
179, 97
               

               
Conread position:
               
216-550
               

               
Cow position:
               
chr21:1059224-1058894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
216-550
               

               
Cow position:
               
chr21:18842088-18842421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 184
               

               
Conread position:
               
216-550
               

               
Cow position:
               
chr21:33791232-33791551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
216-577
               

               
Cow position:
               
chr21:5898253-5898608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
164, 63
               

               
Conread position:
               
217-503
               

               
Cow position:
               
chr21:19411866-19412157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
218-484
               

               
Cow position:
               
chr21:20193041-20192783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
162, 45
               

               
Conread position:
               
219-574
               

               
Cow position:
               
chr21:5567132-5566782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
221-546
               

               
Cow position:
               
chr21:34160096-34159779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
226-420
               

               
Cow position:
               
chr21:297893-297694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
227-550
               

               
Cow position:
               
chr21:3819239-3818925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr21:22465328-22465095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
228-535
               

               
Cow position:
               
chr21:10601238-10601539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 152
               

               
Conread position:
               
231-398
               

               
Cow position:
               
chr21:46599495-46599324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 156
               

               
Conread position:
               
231-530
               

               
Cow position:
               
chr21:15611274-15610986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
231-533
               

               
Cow position:
               
chr21:46859988-46860270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
231-533
               

               
Cow position:
               
chr21:48176954-48176658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
231-535
               

               
Cow position:
               
chr21:724751-725062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
231-535
               

               
Cow position:
               
chr21:19363325-19363634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 216
               

               
Conread position:
               
231-550
               

               
Cow position:
               
chr21:10514941-10514624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 205
               

               
Conread position:
               
231-550
               

               
Cow position:
               
chr21:28442866-28442561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
152, 87
               

               
Conread position:
               
231-551
               

               
Cow position:
               
chr21:24131203-24130897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
96, 85
               

               
Conread position:
               
231-552
               

               
Cow position:
               
chr21:13489781-13489457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 228
               

               
Conread position:
               
234-394
               

               
Cow position:
               
chr21:47160349-47160187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 123
               

               
Conread position:
               
234-483
               

               
Cow position:
               
chr21:18415183-18414932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
234-505
               

               
Cow position:
               
chr21:11251000-11250725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 49
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr21:10823690-10823402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
234-533
               

               
Cow position:
               
chr21:33997096-33997390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 193
               

               
Conread position:
               
234-534
               

               
Cow position:
               
chr21:5427071-5426774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
146, 92
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr21:10151936-10151612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 220
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr21:46144090-46143760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 225
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr21:22353106-22353415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
234-582
               

               
Cow position:
               
chr21:17428627-17428291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
235-458
               

               
Cow position:
               
chr21:17009111-17008884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 152
               

               
Conread position:
               
235-467
               

               
Cow position:
               
chr21:37789869-37790110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 198
               

               
Conread position:
               
235-476
               

               
Cow position:
               
chr21:21077730-21077486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
235-484
               

               
Cow position:
               
chr21:18155436-18155693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
235-491
               

               
Cow position:
               
chr21:25628780-25629038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 114
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chr21:34151715-34151451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chr21:42559222-42558964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
235-497
               

               
Cow position:
               
chr21:19369217-19369479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
235-500
               

               
Cow position:
               
chr21:17875063-17875331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
151, 98
               

               
Conread position:
               
235-503
               

               
Cow position:
               
chr21:17600165-17599900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
235-510
               

               
Cow position:
               
chr21:2657939-2657676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 133
               

               
Conread position:
               
235-512
               

               
Cow position:
               
chr21:44962927-44962647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
235-530
               

               
Cow position:
               
chr21:15584289-15584575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
109, 177
               

               
Conread position:
               
235-533
               

               
Cow position:
               
chr21:4998365-4998655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 64
               

               
Conread position:
               
235-533
               

               
Cow position:
               
chr21:10001205-10000912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
138, 211
               

               
Conread position:
               
235-534
               

               
Cow position:
               
chr21:19958342-19958052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
293, 49
               

               
Conread position:
               
235-535
               

               
Cow position:
               
chr21:4904837-4905142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
149, 92
               

               
Conread position:
               
235-535
               

               
Cow position:
               
chr21:10007509-10007812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
235-535
               

               
Cow position:
               
chr21:41198269-41198582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
235-536
               

               
Cow position:
               
chr21:7564177-7564493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 222
               

               
Conread position:
               
235-536
               

               
Cow position:
               
chr21:19083457-19083772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 117
               

               
Conread position:
               
235-536
               

               
Cow position:
               
chr21:49699910-49700207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
158, 83
               

               
Conread position:
               
235-537
               

               
Cow position:
               
chr21:8549811-8549505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
235-537
               

               
Cow position:
               
chr21:17559793-17560111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
235-537
               

               
Cow position:
               
chr21:28429574-28429277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 111
               

               
Conread position:
               
235-537
               

               
Cow position:
               
chr21:28477759-28477449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
47, 109
               

               
Conread position:
               
235-539
               

               
Cow position:
               
chr21:15494230-15493927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
235-545
               

               
Cow position:
               
chr21:44114001-44114312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
97, 8
               

               
Conread position:
               
235-546
               

               
Cow position:
               
chr21:9028746-9028439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
149, 94
               

               
Conread position:
               
235-549
               

               
Cow position:
               
chr21:30231564-30231885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 306
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:1483610-1483306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
151, 82
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:5595776-5595478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
175, 89
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:8618394-8618091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
151, 41
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:12366501-12366204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
171, 62
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:13048063-13048380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 234
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:17936502-17936187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
110, 94
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:18718802-18718485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:19766984-19766671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 94
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:24137051-24136734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:26876058-26875738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:27123991-27124311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 156
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:27607229-27607546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 95
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:33729560-33729250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
93, 113
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:40786807-40786487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
235-552
               

               
Cow position:
               
chr21:48531904-48531577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 163
               

               
Conread position:
               
235-556
               

               
Cow position:
               
chr21:18781971-18781650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
157, 11
               

               
Conread position:
               
235-559
               

               
Cow position:
               
chr21:28027926-28027611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
235-559
               

               
Cow position:
               
chr21:39664268-39664580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
100, 118
               

               
Conread position:
               
235-571
               

               
Cow position:
               
chr21:6834179-6833850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
151, 102
               

               
Conread position:
               
235-582
               

               
Cow position:
               
chr21:21652601-21652254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 88
               

               
Conread position:
               
236-479
               

               
Cow position:
               
chr21:36789924-36789679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 154
               

               
Conread position:
               
236-500
               

               
Cow position:
               
chr21:41951166-41951433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
137, 101
               

               
Conread position:
               
236-535
               

               
Cow position:
               
chr21:47066772-47067059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
236-550
               

               
Cow position:
               
chr21:17616186-17616508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr21:17638020-17637758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
158, 90
               

               
Conread position:
               
237-525
               

               
Cow position:
               
chr21:28244598-28244315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
237-534
               

               
Cow position:
               
chr21:24888127-24887839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
237-535
               

               
Cow position:
               
chr21:23499700-23499993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
237-536
               

               
Cow position:
               
chr21:29979643-29979927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
149, 27
               

               
Conread position:
               
237-543
               

               
Cow position:
               
chr21:27145864-27146170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
237-550
               

               
Cow position:
               
chr21:4267219-4267533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
237-550
               

               
Cow position:
               
chr21:20044636-20044954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
102, 238
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr21:3498621-3498313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr21:23192381-23192703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 305
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr21:24698609-24698304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr21:35997300-35996987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr21:44515392-44515089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
100, 208
               

               
Conread position:
               
237-558
               

               
Cow position:
               
chr21:19615304-19614981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
238-550
               

               
Cow position:
               
chr21:47767254-47767566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
135, 91
               

               
Conread position:
               
238-552
               

               
Cow position:
               
chr21:25286644-25286324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 114
               

               
Conread position:
               
239-458
               

               
Cow position:
               
chr21:38664765-38664541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
92, 181
               

               
Conread position:
               
239-482
               

               
Cow position:
               
chr21:17856670-17856426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 149
               

               
Conread position:
               
239-489
               

               
Cow position:
               
chr21:13519306-13519066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
178, 29
               

               
Conread position:
               
239-538
               

               
Cow position:
               
chr21:25537124-25536823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
240-487
               

               
Cow position:
               
chr21:11131707-11131457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
140, 89
               

               
Conread position:
               
241-552
               

               
Cow position:
               
chr21:2367456-2367155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
139, 102
               

               
Conread position:
               
242-550
               

               
Cow position:
               
chr21:5650026-5649723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
242-550
               

               
Cow position:
               
chr21:18844889-18845198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 268
               

               
Conread position:
               
243-552
               

               
Cow position:
               
chr21:10727399-10727096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
244-550
               

               
Cow position:
               
chr21:36162838-36163146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 225
               

               
Conread position:
               
246-536
               

               
Cow position:
               
chr21:23149902-23150191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
247-550
               

               
Cow position:
               
chr21:20262217-20262517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
248-550
               

               
Cow position:
               
chr21:6102148-6102452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
248-550
               

               
Cow position:
               
chr21:24222420-24222721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 256
               

               
Conread position:
               
249-536
               

               
Cow position:
               
chr21:24607502-24607214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
97, 127
               

               
Conread position:
               
249-552
               

               
Cow position:
               
chr21:426923-426605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 127
               

               
Conread position:
               
250-552
               

               
Cow position:
               
chr21:13409716-13410008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr21:44733062-44733308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
248, 127
               

               
Conread position:
               
255-552
               

               
Cow position:
               
chr21:2679667-2679367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 110
               

               
Conread position:
               
257-460
               

               
Cow position:
               
chr21:2904370-2904572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
257-552
               

               
Cow position:
               
chr21:4795334-4795037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
260-550
               

               
Cow position:
               
chr21:32536082-32535793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
67, 177
               

               
Conread position:
               
261-520
               

               
Cow position:
               
chr21:21770230-21769969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 7
               

               
Conread position:
               
263-552
               

               
Cow position:
               
chr21:11640123-11639832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
264-471
               

               
Cow position:
               
chr21:9360536-9360335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
264-535
               

               
Cow position:
               
chr21:4189942-4189664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 208
               

               
Conread position:
               
264-540
               

               
Cow position:
               
chr21:3380977-3381256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 191
               

               
Conread position:
               
265-536
               

               
Cow position:
               
chr21:1558729-1558455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
265-550
               

               
Cow position:
               
chr21:41235607-41235894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
266-552
               

               
Cow position:
               
chr21:30150164-30150454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
268-525
               

               
Cow position:
               
chr21:5344763-5344495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
270-469
               

               
Cow position:
               
chr21:18041752-18041956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
270-550
               

               
Cow position:
               
chr21:34075066-34074784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
270-550
               

               
Cow position:
               
chr21:42874534-42874812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
272-550
               

               
Cow position:
               
chr21:33709073-33709353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
275-550
               

               
Cow position:
               
chr21:3364883-3364606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
110, 54
               

               
Conread position:
               
277-536
               

               
Cow position:
               
chr21:8985640-8985378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 172
               

               
Conread position:
               
278-550
               

               
Cow position:
               
chr21:13632980-13632706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
279-540
               

               
Cow position:
               
chr21:28882224-28881967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 144
               

               
Conread position:
               
279-550
               

               
Cow position:
               
chr21:6764614-6764885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
281-535
               

               
Cow position:
               
chr21:7132394-7132633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
282-552
               

               
Cow position:
               
chr21:18495055-18494781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 258
               

               
Conread position:
               
282-552
               

               
Cow position:
               
chr21:44754695-44754965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
283-537
               

               
Cow position:
               
chr21:5137405-5137662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
283-537
               

               
Cow position:
               
chr21:27743831-27743570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
56, 171
               

               
Conread position:
               
283-554
               

               
Cow position:
               
chr21:2785694-2785964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
285-538
               

               
Cow position:
               
chr21:20925425-20925680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
285-550
               

               
Cow position:
               
chr21:16910141-16909876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
285-558
               

               
Cow position:
               
chr21:35062167-35061896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
286-536
               

               
Cow position:
               
chr21:21077405-21077159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr21:2490707-2490973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr21:4093065-4092799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr21:30059361-30059627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr21:30656052-30655786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr21:33632366-33632632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr21:38848387-38848653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-567
               

               
Cow position:
               
chr21:12960819-12961097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
287-548
               

               
Cow position:
               
chr21:39450083-39450349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 239
               

               
Conread position:
               
287-550
               

               
Cow position:
               
chr21:17175225-17174957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
287-550
               

               
Cow position:
               
chr21:24765360-24765101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
287-550
               

               
Cow position:
               
chr21:47802181-47802443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
44, 180
               

               
Conread position:
               
287-551
               

               
Cow position:
               
chr21:8351233-8351488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
287-554
               

               
Cow position:
               
chr21:13898266-13898004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 177
               

               
Conread position:
               
288-537
               

               
Cow position:
               
chr21:16612702-16612457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
288-554
               

               
Cow position:
               
chr21:36793972-36793695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
289-552
               

               
Cow position:
               
chr21:27614361-27614102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
290-550
               

               
Cow position:
               
chr21:37282377-37282126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
295-533
               

               
Cow position:
               
chr21:21480114-21480351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
295-537
               

               
Cow position:
               
chr21:23984212-23984456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
295-550
               

               
Cow position:
               
chr21:911896-912150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
51, 168
               

               
Conread position:
               
297-550
               

               
Cow position:
               
chr21:28443305-28443562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
300-550
               

               
Cow position:
               
chr21:42913678-42913929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
301-550
               

               
Cow position:
               
chr21:21216077-21216324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
302-533
               

               
Cow position:
               
chr21:23310889-23311113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
302-549
               

               
Cow position:
               
chr21:31676562-31676316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
302-550
               

               
Cow position:
               
chr21:17302316-17302559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
305-534
               

               
Cow position:
               
chr21:41454888-41455122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
305-535
               

               
Cow position:
               
chr21:45866994-45866766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 130
               

               
Conread position:
               
305-537
               

               
Cow position:
               
chr21:1464290-1464056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
305-550
               

               
Cow position:
               
chr21:9710646-9710887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
305-550
               

               
Cow position:
               
chr21:42170694-42170447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
305-571
               

               
Cow position:
               
chr21:43240925-43240656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
306-535
               

               
Cow position:
               
chr21:19936869-19937103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
307-505
               

               
Cow position:
               
chr21:10576172-10575984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
307-550
               

               
Cow position:
               
chr21:3813425-3813666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr21:5636660-5636902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
308-550
               

               
Cow position:
               
chr21:40058864-40058623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 160
               

               
Conread position:
               
310-552
               

               
Cow position:
               
chr21:12617195-12616954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
310-567
               

               
Cow position:
               
chr21:42053211-42053465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 135
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr21:24759118-24758897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
311-552
               

               
Cow position:
               
chr21:9212649-9212410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
311-557
               

               
Cow position:
               
chr21:27376504-27376259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
313-503
               

               
Cow position:
               
chr21:12640388-12640195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
313-537
               

               
Cow position:
               
chr21:16789775-16789549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 46
               

               
Conread position:
               
317-492
               

               
Cow position:
               
chr21:37886456-37886283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
317-549
               

               
Cow position:
               
chr21:24865205-24864973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
318-548
               

               
Cow position:
               
chr21:42024169-42023943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
318-550
               

               
Cow position:
               
chr21:16166594-16166816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
318-550
               

               
Cow position:
               
chr21:41957128-41957357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
318-550
               

               
Cow position:
               
chr21:46131936-46132161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
318-567
               

               
Cow position:
               
chr21:37361430-37361670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
319-536
               

               
Cow position:
               
chr21:394065-393850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
320-503
               

               
Cow position:
               
chr21:67347-67531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
320-537
               

               
Cow position:
               
chr21:29943044-29942835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
320-550
               

               
Cow position:
               
chr21:5597193-5596963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
322-484
               

               
Cow position:
               
chr21:27810454-27810285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
322-552
               

               
Cow position:
               
chr21:48107820-48108052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
323-504
               

               
Cow position:
               
chr21:2495130-2495313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
323-548
               

               
Cow position:
               
chr21:17434276-17434502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
55, 112
               

               
Conread position:
               
323-549
               

               
Cow position:
               
chr21:21919885-21919660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
7, 210
               

               
Conread position:
               
323-549
               

               
Cow position:
               
chr21:40244482-40244252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
323-550
               

               
Cow position:
               
chr21:10866920-10866692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
323-552
               

               
Cow position:
               
chr21:28997860-28998091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
325-552
               

               
Cow position:
               
chr21:34347048-34346822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
326-512
               

               
Cow position:
               
chr21:14515891-14515697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
327-552
               

               
Cow position:
               
chr21:28993583-28993811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
53, 211
               

               
Conread position:
               
329-550
               

               
Cow position:
               
chr21:21223321-21223107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
331-577
               

               
Cow position:
               
chr21:28512561-28512324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
332-550
               

               
Cow position:
               
chr21:24094716-24094927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
332-552
               

               
Cow position:
               
chr21:11706712-11706936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 208
               

               
Conread position:
               
333-535
               

               
Cow position:
               
chr21:48250995-48251200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
333-551
               

               
Cow position:
               
chr21:23786062-23785847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 139
               

               
Conread position:
               
334-536
               

               
Cow position:
               
chr21:20426558-20426361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
336-530
               

               
Cow position:
               
chr21:28617618-28617425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
336-536
               

               
Cow position:
               
chr21:45375651-45375444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
337-530
               

               
Cow position:
               
chr21:42190147-42190334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
337-550
               

               
Cow position:
               
chr21:15445045-15445262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
337-550
               

               
Cow position:
               
chr21:42145941-42145733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
338-538
               

               
Cow position:
               
chr21:10882466-10882260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
338-550
               

               
Cow position:
               
chr21:34659061-34658851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
340-552
               

               
Cow position:
               
chr21:7716760-7716976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
342-549
               

               
Cow position:
               
chr21:13303844-13303637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
342-549
               

               
Cow position:
               
chr21:42463811-42464026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
342-550
               

               
Cow position:
               
chr21:32237318-32237114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
347-550
               

               
Cow position:
               
chr21:40065296-40065498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 144
               

               
Conread position:
               
348-552
               

               
Cow position:
               
chr21:23478700-23478904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr21:2526127-2525968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
353-552
               

               
Cow position:
               
chr21:23683560-23683365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
362-570
               

               
Cow position:
               
chr21:4268879-4268671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
377-534
               

               
Cow position:
               
chr21:13163875-13163721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
377-535
               

               
Cow position:
               
chr21:9998733-9998891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
377-536
               

               
Cow position:
               
chr21:26241812-26241653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
377-552
               

               
Cow position:
               
chr21:18935745-18935576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
377-558
               

               
Cow position:
               
chr21:363634-363463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
378-552
               

               
Cow position:
               
chr21:13395535-13395371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
378-552
               

               
Cow position:
               
chr21:37208123-37208294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
378-565
               

               
Cow position:
               
chr21:46829287-46829466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
378-567
               

               
Cow position:
               
chr21:31159246-31159057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 158
               

               
Conread position:
               
379-521
               

               
Cow position:
               
chr21:14126030-14125889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
379-552
               

               
Cow position:
               
chr21:28599759-28599586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
381-524
               

               
Cow position:
               
chr21:43631219-43631362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
381-535
               

               
Cow position:
               
chr21:38692166-38692019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
381-558
               

               
Cow position:
               
chr21:7791068-7791244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
384-550
               

               
Cow position:
               
chr21:34254302-34254465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
387-536
               

               
Cow position:
               
chr21:43300679-43300828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
387-537
               

               
Cow position:
               
chr21:35897456-35897310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
394-550
               

               
Cow position:
               
chr21:1511036-1510890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
396-533
               

               
Cow position:
               
chr21:30626214-30626354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
396-536
               

               
Cow position:
               
chr21:28029366-28029226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
396-550
               

               
Cow position:
               
chr21:20162503-20162352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
396-550
               

               
Cow position:
               
chr21:41040836-41040684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
397-537
               

               
Cow position:
               
chr21:37845779-37845920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
397-550
               

               
Cow position:
               
chr21:28907683-28907827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
397-552
               

               
Cow position:
               
chr21:13256769-13256619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
397-552
               

               
Cow position:
               
chr21:16270695-16270547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
399-537
               

               
Cow position:
               
chr21:44220184-44220047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
399-552
               

               
Cow position:
               
chr21:26680983-26681132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
399-552
               

               
Cow position:
               
chr21:35899772-35899623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
400-550
               

               
Cow position:
               
chr21:42465794-42465646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
400-552
               

               
Cow position:
               
chr21:11082377-11082526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
401-552
               

               
Cow position:
               
chr21:36819253-36819398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
401-567
               

               
Cow position:
               
chr21:8289677-8289839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
402-537
               

               
Cow position:
               
chr21:49145140-49145271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
403-550
               

               
Cow position:
               
chr21:17218657-17218799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
408-548
               

               
Cow position:
               
chr21:18713236-18713103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
409-550
               

               
Cow position:
               
chr21:17282655-17282520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
411-549
               

               
Cow position:
               
chr21:4279586-4279450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
416-550
               

               
Cow position:
               
chr21:9278321-9278189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
416-550
               

               
Cow position:
               
chr21:11877328-11877201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
416-550
               

               
Cow position:
               
chr21:31278723-31278596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
416-552
               

               
Cow position:
               
chr21:28919677-28919811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
416-552
               

               
Cow position:
               
chr21:41430014-41429879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 73
               

               
Conread position:
               
416-570
               

               
Cow position:
               
chr21:20548966-20549113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 46
               

               
Conread position:
               
418-526
               

               
Cow position:
               
chr21:9438713-9438605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
418-537
               

               
Cow position:
               
chr21:34738542-34738426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
425-567
               

               
Cow position:
               
chr21:25158830-25158689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
426-536
               

               
Cow position:
               
chr21:45263087-45263193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
426-537
               

               
Cow position:
               
chr21:11173906-11173795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
427-552
               

               
Cow position:
               
chr21:12339105-12338984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
429-550
               

               
Cow position:
               
chr21:46627010-46626894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
432-550
               

               
Cow position:
               
chr21:30257771-30257887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
444-557
               

               
Cow position:
               
chr21:22464979-22464867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
110, 89
               
Show alignments to all cow chromosomes.