• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8049M02.5
        

               
Conread position:
               
41-271
               

               
Cow position:
               
chr24:28186279-28186508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
43-550
               

               
Cow position:
               
chr24:13626518-13626018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
48-536
               

               
Cow position:
               
chr24:34533338-34532864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr24:28689888-28689605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
51-378
               

               
Cow position:
               
chr24:230502-230175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
52-600
               

               
Cow position:
               
chr24:30313810-30314360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
53-537
               

               
Cow position:
               
chr24:43028111-43028586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
55-550
               

               
Cow position:
               
chr24:18390092-18390559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
55-550
               

               
Cow position:
               
chr24:34273038-34272531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
56-503
               

               
Cow position:
               
chr24:30236087-30235643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
58-550
               

               
Cow position:
               
chr24:16476622-16476136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
243, 26
               

               
Conread position:
               
59-552
               

               
Cow position:
               
chr24:5142150-5141668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 13
               

               
Conread position:
               
67-534
               

               
Cow position:
               
chr24:40850367-40849904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
72-383
               

               
Cow position:
               
chr24:13948322-13948014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
72-492
               

               
Cow position:
               
chr24:15373603-15373194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
72-550
               

               
Cow position:
               
chr24:28303161-28303619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
72-552
               

               
Cow position:
               
chr24:33153976-33153509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 61
               

               
Conread position:
               
73-567
               

               
Cow position:
               
chr24:15861391-15861889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
74-389
               

               
Cow position:
               
chr24:39791735-39791428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 59
               

               
Conread position:
               
76-325
               

               
Cow position:
               
chr24:37651919-37651677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
77-552
               

               
Cow position:
               
chr24:18484796-18485273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
82-365
               

               
Cow position:
               
chr24:27348983-27349268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
84-546
               

               
Cow position:
               
chr24:27906628-27906165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
84-549
               

               
Cow position:
               
chr24:26928750-26929219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
87-552
               

               
Cow position:
               
chr24:39849706-39850150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 10
               

               
Conread position:
               
89-552
               

               
Cow position:
               
chr24:17311043-17311482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
90-552
               

               
Cow position:
               
chr24:28063134-28062672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
91-454
               

               
Cow position:
               
chr24:19000226-18999866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
91-488
               

               
Cow position:
               
chr24:5632845-5633248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
91-552
               

               
Cow position:
               
chr24:20225928-20225464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 125
               

               
Conread position:
               
95-550
               

               
Cow position:
               
chr24:36403977-36404418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 46
               

               
Conread position:
               
96-559
               

               
Cow position:
               
chr24:43371422-43370968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
98-481
               

               
Cow position:
               
chr24:20801168-20801548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
100-364
               

               
Cow position:
               
chr24:37974809-37975070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
226, 60
               

               
Conread position:
               
108-550
               

               
Cow position:
               
chr24:44987206-44987645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
110-538
               

               
Cow position:
               
chr24:42103525-42103113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
110-539
               

               
Cow position:
               
chr24:17104408-17104828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
110-552
               

               
Cow position:
               
chr24:37650839-37650397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
121-537
               

               
Cow position:
               
chr24:16556484-16556895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
122-549
               

               
Cow position:
               
chr24:19769651-19769228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 273
               

               
Conread position:
               
137-403
               

               
Cow position:
               
chr24:14457586-14457848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
138-494
               

               
Cow position:
               
chr24:6102964-6102605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
180, 49
               

               
Conread position:
               
138-526
               

               
Cow position:
               
chr24:12851844-12851481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
138-570
               

               
Cow position:
               
chr24:14648223-14648630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
396, 7
               

               
Conread position:
               
142-340
               

               
Cow position:
               
chr24:42639120-42639313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
183, 14
               

               
Conread position:
               
142-459
               

               
Cow position:
               
chr24:18970372-18970691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
142-480
               

               
Cow position:
               
chr24:6131734-6132080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
142-550
               

               
Cow position:
               
chr24:33944534-33944136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
144-550
               

               
Cow position:
               
chr24:18331852-18331465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
145-461
               

               
Cow position:
               
chr24:32071094-32070778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
146-532
               

               
Cow position:
               
chr24:41068392-41068013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
148-552
               

               
Cow position:
               
chr24:11119404-11119007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
232, 45
               

               
Conread position:
               
148-552
               

               
Cow position:
               
chr24:43432916-43432529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
149-376
               

               
Cow position:
               
chr24:30308428-30308656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
150-534
               

               
Cow position:
               
chr24:40130254-40129865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
150-537
               

               
Cow position:
               
chr24:18741449-18741831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
236, 19
               

               
Conread position:
               
150-550
               

               
Cow position:
               
chr24:29673647-29673248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 42
               

               
Conread position:
               
150-551
               

               
Cow position:
               
chr24:32204668-32205066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
190, 158
               

               
Conread position:
               
152-520
               

               
Cow position:
               
chr24:24457129-24457491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
255, 20
               

               
Conread position:
               
152-547
               

               
Cow position:
               
chr24:31159740-31159360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
210, 106
               

               
Conread position:
               
153-370
               

               
Cow position:
               
chr24:20364286-20364503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
154-552
               

               
Cow position:
               
chr24:201523-201906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
156-484
               

               
Cow position:
               
chr24:34008454-34008788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
178, 31
               

               
Conread position:
               
157-366
               

               
Cow position:
               
chr24:27284933-27284731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
170, 13
               

               
Conread position:
               
157-449
               

               
Cow position:
               
chr24:6912246-6912527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
158-459
               

               
Cow position:
               
chr24:17832704-17833000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
158-552
               

               
Cow position:
               
chr24:33098356-33098761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
167, 29
               

               
Conread position:
               
159-527
               

               
Cow position:
               
chr24:20943269-20942919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
190, 43
               

               
Conread position:
               
160-330
               

               
Cow position:
               
chr24:17375752-17375585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
161-479
               

               
Cow position:
               
chr24:16089341-16089030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
161-506
               

               
Cow position:
               
chr24:28326962-28327312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 132
               

               
Conread position:
               
164-534
               

               
Cow position:
               
chr24:34762004-34761635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
165-550
               

               
Cow position:
               
chr24:19465806-19466204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
167-450
               

               
Cow position:
               
chr24:18356944-18357230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
167-550
               

               
Cow position:
               
chr24:31816686-31816314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 19
               

               
Conread position:
               
169-445
               

               
Cow position:
               
chr24:23186810-23187089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 205
               

               
Conread position:
               
169-445
               

               
Cow position:
               
chr24:24061701-24061974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
161, 55
               

               
Conread position:
               
169-455
               

               
Cow position:
               
chr24:18017337-18017047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
169-532
               

               
Cow position:
               
chr24:19535146-19535504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
169-547
               

               
Cow position:
               
chr24:17955339-17955716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
211, 18
               

               
Conread position:
               
169-551
               

               
Cow position:
               
chr24:43200170-43200546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
170-457
               

               
Cow position:
               
chr24:7476244-7476537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
170-527
               

               
Cow position:
               
chr24:18474623-18474998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 24
               

               
Conread position:
               
170-534
               

               
Cow position:
               
chr24:41980552-41980922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
170-535
               

               
Cow position:
               
chr24:17407497-17407131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
170-535
               

               
Cow position:
               
chr24:28496476-28496847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
170-550
               

               
Cow position:
               
chr24:2108135-2108523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 176
               

               
Conread position:
               
170-552
               

               
Cow position:
               
chr24:42344888-42345282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
170-554
               

               
Cow position:
               
chr24:5754940-5754566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 22
               

               
Conread position:
               
171-550
               

               
Cow position:
               
chr24:2402262-2402645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 295
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr24:22133274-22133117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
172-400
               

               
Cow position:
               
chr24:29561470-29561701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
172-501
               

               
Cow position:
               
chr24:31359424-31359098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 20
               

               
Conread position:
               
172-534
               

               
Cow position:
               
chr24:11840292-11839921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
172-568
               

               
Cow position:
               
chr24:16994984-16994605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
173-365
               

               
Cow position:
               
chr24:28043081-28042884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
174-336
               

               
Cow position:
               
chr24:5360817-5360660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr24:37823630-37823434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
174-403
               

               
Cow position:
               
chr24:13353142-13352914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
156, 205
               

               
Conread position:
               
174-497
               

               
Cow position:
               
chr24:16510078-16509752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
174-537
               

               
Cow position:
               
chr24:35675639-35675283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 49
               

               
Conread position:
               
174-550
               

               
Cow position:
               
chr24:20874786-20874405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
176-365
               

               
Cow position:
               
chr24:15288927-15288732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
176-550
               

               
Cow position:
               
chr24:3493985-3493622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
176-552
               

               
Cow position:
               
chr24:1269883-1269531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
177-550
               

               
Cow position:
               
chr24:24250822-24250461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 96
               

               
Conread position:
               
178-415
               

               
Cow position:
               
chr24:27713308-27713544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
152, 9
               

               
Conread position:
               
178-459
               

               
Cow position:
               
chr24:41423700-41423423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
178-524
               

               
Cow position:
               
chr24:42825408-42825745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
178-536
               

               
Cow position:
               
chr24:23694804-23695156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
178-567
               

               
Cow position:
               
chr24:15057493-15057109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
179-526
               

               
Cow position:
               
chr24:27824558-27824215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
179-552
               

               
Cow position:
               
chr24:3165917-3165548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 169
               

               
Conread position:
               
180-550
               

               
Cow position:
               
chr24:15246546-15246907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 158
               

               
Conread position:
               
180-550
               

               
Cow position:
               
chr24:34742848-34742478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
113, 7
               

               
Conread position:
               
180-552
               

               
Cow position:
               
chr24:25885064-25885431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
181-536
               

               
Cow position:
               
chr24:17860163-17860510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
181-537
               

               
Cow position:
               
chr24:27290967-27290616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
181-549
               

               
Cow position:
               
chr24:28721978-28721618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
182-389
               

               
Cow position:
               
chr24:32095402-32095209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
182-524
               

               
Cow position:
               
chr24:10499307-10498963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
186-449
               

               
Cow position:
               
chr24:37037993-37037723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
62, 227
               

               
Conread position:
               
186-525
               

               
Cow position:
               
chr24:27054502-27054152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
186-533
               

               
Cow position:
               
chr24:32158185-32158529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
186-552
               

               
Cow position:
               
chr24:29171052-29170692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
200, 63
               

               
Conread position:
               
186-567
               

               
Cow position:
               
chr24:7079874-7079497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
187-510
               

               
Cow position:
               
chr24:34396089-34396406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
195, 127
               

               
Conread position:
               
187-552
               

               
Cow position:
               
chr24:28319119-28319475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 172
               

               
Conread position:
               
187-571
               

               
Cow position:
               
chr24:29063570-29063936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 7
               

               
Conread position:
               
187-574
               

               
Cow position:
               
chr24:29389324-29388952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 74
               

               
Conread position:
               
188-417
               

               
Cow position:
               
chr24:28234131-28233904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
164, 75
               

               
Conread position:
               
188-526
               

               
Cow position:
               
chr24:33372640-33372301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 18
               

               
Conread position:
               
188-537
               

               
Cow position:
               
chr24:11887246-11886897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 75
               

               
Conread position:
               
188-551
               

               
Cow position:
               
chr24:24490929-24491286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 42
               

               
Conread position:
               
190-552
               

               
Cow position:
               
chr24:40301247-40300882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
192-536
               

               
Cow position:
               
chr24:29679228-29679570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 71
               

               
Conread position:
               
192-552
               

               
Cow position:
               
chr24:27844443-27844793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 158
               

               
Conread position:
               
193-537
               

               
Cow position:
               
chr24:33723761-33724111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
193-563
               

               
Cow position:
               
chr24:39227078-39226710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 70
               

               
Conread position:
               
194-523
               

               
Cow position:
               
chr24:31324367-31324034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
196-393
               

               
Cow position:
               
chr24:175414-175611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
196-470
               

               
Cow position:
               
chr24:30897457-30897735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
196-523
               

               
Cow position:
               
chr24:43927252-43927568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
196-525
               

               
Cow position:
               
chr24:2095801-2096137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
99, 232
               

               
Conread position:
               
196-525
               

               
Cow position:
               
chr24:27748721-27748401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
171, 128
               

               
Conread position:
               
196-535
               

               
Cow position:
               
chr24:18024893-18025230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 67
               

               
Conread position:
               
196-567
               

               
Cow position:
               
chr24:23556253-23556617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
197-550
               

               
Cow position:
               
chr24:43364438-43364092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
200-530
               

               
Cow position:
               
chr24:24755524-24755196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
116, 231
               

               
Conread position:
               
203-447
               

               
Cow position:
               
chr24:19736260-19736502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 131
               

               
Conread position:
               
203-536
               

               
Cow position:
               
chr24:31812263-31811925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 167
               

               
Conread position:
               
203-537
               

               
Cow position:
               
chr24:27725938-27726264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
134, 228
               

               
Conread position:
               
203-550
               

               
Cow position:
               
chr24:28553490-28553815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
203-550
               

               
Cow position:
               
chr24:39483550-39483202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
203-552
               

               
Cow position:
               
chr24:8886984-8886643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
89, 131
               

               
Conread position:
               
204-550
               

               
Cow position:
               
chr24:7377027-7377367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
205-552
               

               
Cow position:
               
chr24:27874665-27874329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
181, 47
               

               
Conread position:
               
206-550
               

               
Cow position:
               
chr24:43635497-43635164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
210-550
               

               
Cow position:
               
chr24:3430799-3430464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
210-550
               

               
Cow position:
               
chr24:27267691-27267363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
215-500
               

               
Cow position:
               
chr24:22225249-22224954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
65, 139
               

               
Conread position:
               
215-503
               

               
Cow position:
               
chr24:9087424-9087710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
215-503
               

               
Cow position:
               
chr24:22263590-22263307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
170, 116
               

               
Conread position:
               
215-536
               

               
Cow position:
               
chr24:39159488-39159803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
215-550
               

               
Cow position:
               
chr24:30768775-30768439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
215-550
               

               
Cow position:
               
chr24:32212605-32212938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
216-537
               

               
Cow position:
               
chr24:32822710-32823042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 310
               

               
Conread position:
               
216-550
               

               
Cow position:
               
chr24:15508483-15508805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
117, 62
               

               
Conread position:
               
216-550
               

               
Cow position:
               
chr24:32369854-32370182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
216-552
               

               
Cow position:
               
chr24:28690745-28690427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
110, 48
               

               
Conread position:
               
217-493
               

               
Cow position:
               
chr24:40606744-40607023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
217-545
               

               
Cow position:
               
chr24:25090907-25091231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
171, 19
               

               
Conread position:
               
217-550
               

               
Cow position:
               
chr24:23034729-23034394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
168, 112
               

               
Conread position:
               
217-576
               

               
Cow position:
               
chr24:9589950-9590312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
120, 134
               

               
Conread position:
               
218-550
               

               
Cow position:
               
chr24:38347732-38347408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
219-548
               

               
Cow position:
               
chr24:10671454-10671115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
221-556
               

               
Cow position:
               
chr24:41755918-41755589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
226-537
               

               
Cow position:
               
chr24:32124587-32124902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
226-540
               

               
Cow position:
               
chr24:212038-211718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
230-550
               

               
Cow position:
               
chr24:22976184-22975865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
231-533
               

               
Cow position:
               
chr24:44870053-44869758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
231-536
               

               
Cow position:
               
chr24:30544820-30545115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
231-549
               

               
Cow position:
               
chr24:6150069-6149760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
102, 123
               

               
Conread position:
               
232-513
               

               
Cow position:
               
chr24:18344108-18343812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 240
               

               
Conread position:
               
234-455
               

               
Cow position:
               
chr24:16895394-16895618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 120
               

               
Conread position:
               
234-471
               

               
Cow position:
               
chr24:31036391-31036154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
234-485
               

               
Cow position:
               
chr24:28990604-28990357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
234-515
               

               
Cow position:
               
chr24:33221897-33222178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 220
               

               
Conread position:
               
234-535
               

               
Cow position:
               
chr24:39350173-39350465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
234-537
               

               
Cow position:
               
chr24:33230717-33230405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr24:16869740-16870057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
133, 95
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr24:17294155-17294458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr24:32054704-32054400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 149
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr24:29180929-29180628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
234-567
               

               
Cow position:
               
chr24:45004990-45004667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
100, 132
               

               
Conread position:
               
235-371
               

               
Cow position:
               
chr24:43536995-43536858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
235-484
               

               
Cow position:
               
chr24:352565-352812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chr24:22079502-22079239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
235-501
               

               
Cow position:
               
chr24:3664218-3663940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr24:27300200-27299941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
160, 62
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chr24:20249854-20250136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 93
               

               
Conread position:
               
235-513
               

               
Cow position:
               
chr24:25194306-25194030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
136, 16
               

               
Conread position:
               
235-515
               

               
Cow position:
               
chr24:17284944-17285236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
235-524
               

               
Cow position:
               
chr24:13808525-13808825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
235-526
               

               
Cow position:
               
chr24:39143654-39143355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 256
               

               
Conread position:
               
235-530
               

               
Cow position:
               
chr24:29595767-29596069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
122, 193
               

               
Conread position:
               
235-531
               

               
Cow position:
               
chr24:11005716-11005408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
235-532
               

               
Cow position:
               
chr24:3152536-3152832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
235-533
               

               
Cow position:
               
chr24:2392228-2391935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
235-535
               

               
Cow position:
               
chr24:32609689-32609380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
235-536
               

               
Cow position:
               
chr24:27040089-27039779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
235-536
               

               
Cow position:
               
chr24:35332767-35332460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
52, 246
               

               
Conread position:
               
235-537
               

               
Cow position:
               
chr24:13369877-13370183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
235-538
               

               
Cow position:
               
chr24:39841807-39842103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
235-549
               

               
Cow position:
               
chr24:15693060-15692748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
235-549
               

               
Cow position:
               
chr24:27096731-27096415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr24:6140909-6141227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
119, 279
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr24:18975251-18974930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr24:27340977-27341295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr24:28599818-28600125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr24:33621439-33621757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr24:34565161-34564857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr24:39440526-39440829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
151, 82
               

               
Conread position:
               
235-551
               

               
Cow position:
               
chr24:17159792-17159474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
235-551
               

               
Cow position:
               
chr24:32693761-32693430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 165
               

               
Conread position:
               
235-552
               

               
Cow position:
               
chr24:25321027-25320716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
151, 82
               

               
Conread position:
               
235-552
               

               
Cow position:
               
chr24:38815009-38814698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
101, 147
               

               
Conread position:
               
235-565
               

               
Cow position:
               
chr24:29782204-29781870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
236-536
               

               
Cow position:
               
chr24:6507729-6508023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
236-537
               

               
Cow position:
               
chr24:18374809-18374514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 110
               

               
Conread position:
               
236-550
               

               
Cow position:
               
chr24:9222343-9222647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
236-550
               

               
Cow position:
               
chr24:28700091-28699786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
236-550
               

               
Cow position:
               
chr24:30229514-30229195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 161
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr24:7001028-7001342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 27
               

               
Conread position:
               
237-536
               

               
Cow position:
               
chr24:23442541-23442840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 107
               

               
Conread position:
               
237-550
               

               
Cow position:
               
chr24:7914046-7913727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
91, 302
               

               
Conread position:
               
237-550
               

               
Cow position:
               
chr24:32758721-32759041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
237-550
               

               
Cow position:
               
chr24:34368966-34369277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
237-550
               

               
Cow position:
               
chr24:44040965-44041281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
93, 232
               

               
Conread position:
               
239-550
               

               
Cow position:
               
chr24:17187899-17188212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
239-550
               

               
Cow position:
               
chr24:36173745-36174054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
240-428
               

               
Cow position:
               
chr24:43967462-43967656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
240-550
               

               
Cow position:
               
chr24:20024650-20024336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 89
               

               
Conread position:
               
241-482
               

               
Cow position:
               
chr24:10125910-10125656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
242-510
               

               
Cow position:
               
chr24:40673386-40673672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
243-503
               

               
Cow position:
               
chr24:10012786-10012546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
164, 84
               

               
Conread position:
               
243-526
               

               
Cow position:
               
chr24:6487950-6487671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
244-496
               

               
Cow position:
               
chr24:39833482-39833735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 89
               

               
Conread position:
               
244-540
               

               
Cow position:
               
chr24:27608065-27608361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 153
               

               
Conread position:
               
246-457
               

               
Cow position:
               
chr24:19800878-19800662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
247-556
               

               
Cow position:
               
chr24:11734753-11734445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 129
               

               
Conread position:
               
248-453
               

               
Cow position:
               
chr24:17492327-17492135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
260-484
               

               
Cow position:
               
chr24:11915126-11914899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 42
               

               
Conread position:
               
261-525
               

               
Cow position:
               
chr24:27052478-27052743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
119, 174
               

               
Conread position:
               
264-535
               

               
Cow position:
               
chr24:7917348-7917627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
264-536
               

               
Cow position:
               
chr24:30483935-30484203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
68, 188
               

               
Conread position:
               
268-537
               

               
Cow position:
               
chr24:15473367-15473095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
268-552
               

               
Cow position:
               
chr24:30178250-30177963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 210
               

               
Conread position:
               
269-552
               

               
Cow position:
               
chr24:634985-634717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
270-541
               

               
Cow position:
               
chr24:3214762-3214487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 59
               

               
Conread position:
               
270-549
               

               
Cow position:
               
chr24:430161-430442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
117, 59
               

               
Conread position:
               
270-550
               

               
Cow position:
               
chr24:7985874-7986156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 59
               

               
Conread position:
               
271-474
               

               
Cow position:
               
chr24:19634079-19633872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
272-536
               

               
Cow position:
               
chr24:36554829-36555088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
273-550
               

               
Cow position:
               
chr24:1840532-1840811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
112, 77
               

               
Conread position:
               
273-550
               

               
Cow position:
               
chr24:12697075-12697354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
112, 56
               

               
Conread position:
               
275-535
               

               
Cow position:
               
chr24:42007742-42007487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 169
               

               
Conread position:
               
276-550
               

               
Cow position:
               
chr24:40381504-40381779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
278-550
               

               
Cow position:
               
chr24:16267771-16267521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
281-552
               

               
Cow position:
               
chr24:6342175-6341896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
283-552
               

               
Cow position:
               
chr24:40184618-40184349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
284-550
               

               
Cow position:
               
chr24:35074086-35073821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
284-550
               

               
Cow position:
               
chr24:35405571-35405842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
59, 256
               

               
Conread position:
               
285-526
               

               
Cow position:
               
chr24:17363656-17363898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
286-534
               

               
Cow position:
               
chr24:29028032-29027789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr24:4637098-4637364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr24:11079883-11080150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr24:11215062-11215328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr24:12519139-12518873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr24:14865520-14865254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr24:14867446-14867180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr24:15626544-15626810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
286-550
               

               
Cow position:
               
chr24:38896551-38896817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
286-568
               

               
Cow position:
               
chr24:7869297-7869013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
287-536
               

               
Cow position:
               
chr24:39218850-39219106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
287-537
               

               
Cow position:
               
chr24:17567375-17567130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
287-552
               

               
Cow position:
               
chr24:35794745-35795013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 251
               

               
Conread position:
               
287-558
               

               
Cow position:
               
chr24:39259151-39258885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
288-533
               

               
Cow position:
               
chr24:24002958-24002719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
288-550
               

               
Cow position:
               
chr24:24136872-24137122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
288-565
               

               
Cow position:
               
chr24:36486076-36486351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
289-550
               

               
Cow position:
               
chr24:27968072-27967809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
51, 172
               

               
Conread position:
               
290-550
               

               
Cow position:
               
chr24:27941026-27941279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
292-533
               

               
Cow position:
               
chr24:27149384-27149141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
295-546
               

               
Cow position:
               
chr24:40407962-40408216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
93, 165
               

               
Conread position:
               
295-552
               

               
Cow position:
               
chr24:11876870-11876610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 167
               

               
Conread position:
               
301-530
               

               
Cow position:
               
chr24:27207219-27207448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 42
               

               
Conread position:
               
301-536
               

               
Cow position:
               
chr24:21860246-21860480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
302-494
               

               
Cow position:
               
chr24:20792098-20792288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
302-550
               

               
Cow position:
               
chr24:22433613-22433359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 238
               

               
Conread position:
               
305-506
               

               
Cow position:
               
chr24:40588787-40588584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
305-533
               

               
Cow position:
               
chr24:28354127-28353895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
305-550
               

               
Cow position:
               
chr24:250606-250840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
305-550
               

               
Cow position:
               
chr24:6913791-6914035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
306-549
               

               
Cow position:
               
chr24:40908992-40908746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
306-550
               

               
Cow position:
               
chr24:18610792-18610545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
306-550
               

               
Cow position:
               
chr24:27185937-27185691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
306-550
               

               
Cow position:
               
chr24:27675422-27675176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
307-550
               

               
Cow position:
               
chr24:21768615-21768371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
307-550
               

               
Cow position:
               
chr24:39493267-39493025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
308-550
               

               
Cow position:
               
chr24:33238573-33238820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
311-550
               

               
Cow position:
               
chr24:12091272-12091031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
311-550
               

               
Cow position:
               
chr24:20605050-20604809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
311-550
               

               
Cow position:
               
chr24:27760822-27760581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
311-550
               

               
Cow position:
               
chr24:35572450-35572215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
311-550
               

               
Cow position:
               
chr24:39254225-39253984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
312-569
               

               
Cow position:
               
chr24:40055765-40056014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
313-526
               

               
Cow position:
               
chr24:5874806-5875021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
313-550
               

               
Cow position:
               
chr24:814307-814536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
315-550
               

               
Cow position:
               
chr24:35822633-35822868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
316-494
               

               
Cow position:
               
chr24:26384693-26384874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
317-535
               

               
Cow position:
               
chr24:18076110-18075891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 124
               

               
Conread position:
               
317-550
               

               
Cow position:
               
chr24:32360563-32360799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
318-536
               

               
Cow position:
               
chr24:5152192-5151975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
318-551
               

               
Cow position:
               
chr24:39955080-39955318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
318-554
               

               
Cow position:
               
chr24:6160890-6161122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
319-556
               

               
Cow position:
               
chr24:37204922-37205156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
321-550
               

               
Cow position:
               
chr24:19658512-19658277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
323-550
               

               
Cow position:
               
chr24:41006806-41006577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 215
               

               
Conread position:
               
323-552
               

               
Cow position:
               
chr24:27683490-27683715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
324-536
               

               
Cow position:
               
chr24:5435091-5435306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
324-546
               

               
Cow position:
               
chr24:17412694-17412466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
324-552
               

               
Cow position:
               
chr24:23685117-23685334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
324-554
               

               
Cow position:
               
chr24:31378710-31378479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
326-550
               

               
Cow position:
               
chr24:12993009-12992784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 205
               

               
Conread position:
               
327-536
               

               
Cow position:
               
chr24:24311456-24311241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
327-552
               

               
Cow position:
               
chr24:39681805-39681582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
328-536
               

               
Cow position:
               
chr24:27763740-27763542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
328-537
               

               
Cow position:
               
chr24:7030207-7030415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
328-552
               

               
Cow position:
               
chr24:27810137-27809908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 211
               

               
Conread position:
               
331-550
               

               
Cow position:
               
chr24:27543531-27543747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
332-534
               

               
Cow position:
               
chr24:37246267-37246475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
332-550
               

               
Cow position:
               
chr24:591858-591639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
332-550
               

               
Cow position:
               
chr24:6900771-6900553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
332-550
               

               
Cow position:
               
chr24:25425002-25424792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
332-550
               

               
Cow position:
               
chr24:35529866-35529652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
332-552
               

               
Cow position:
               
chr24:39500336-39500556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
333-496
               

               
Cow position:
               
chr24:29539963-29540130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
333-550
               

               
Cow position:
               
chr24:25677982-25677763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 160
               

               
Conread position:
               
334-552
               

               
Cow position:
               
chr24:37877177-37876963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
335-536
               

               
Cow position:
               
chr24:25229115-25229317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
335-552
               

               
Cow position:
               
chr24:42380769-42380975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
336-492
               

               
Cow position:
               
chr24:42226239-42226082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
336-552
               

               
Cow position:
               
chr24:43733912-43733696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 132
               

               
Conread position:
               
337-536
               

               
Cow position:
               
chr24:27719815-27720012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
339-550
               

               
Cow position:
               
chr24:14279831-14279616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
339-550
               

               
Cow position:
               
chr24:44877830-44877619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
340-548
               

               
Cow position:
               
chr24:6677449-6677233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr24:18324559-18324325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 199
               

               
Conread position:
               
348-578
               

               
Cow position:
               
chr24:11007149-11006915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 182
               

               
Conread position:
               
352-537
               

               
Cow position:
               
chr24:2730648-2730830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
354-530
               

               
Cow position:
               
chr24:30776742-30776921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
354-555
               

               
Cow position:
               
chr24:38375208-38375009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
26, 108
               

               
Conread position:
               
355-536
               

               
Cow position:
               
chr24:25950744-25950926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
355-550
               

               
Cow position:
               
chr24:25705904-25706103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 183
               

               
Conread position:
               
356-536
               

               
Cow position:
               
chr24:39238717-39238539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
356-537
               

               
Cow position:
               
chr24:21252527-21252710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
362-550
               

               
Cow position:
               
chr24:20282962-20283156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
370-552
               

               
Cow position:
               
chr24:32669183-32669003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
371-537
               

               
Cow position:
               
chr24:35467278-35467439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
373-552
               

               
Cow position:
               
chr24:8591241-8591065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
378-536
               

               
Cow position:
               
chr24:21264613-21264770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
378-549
               

               
Cow position:
               
chr24:6957073-6956906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
378-550
               

               
Cow position:
               
chr24:45216218-45216381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
378-552
               

               
Cow position:
               
chr24:18734456-18734633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
378-554
               

               
Cow position:
               
chr24:21522999-21522824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
379-561
               

               
Cow position:
               
chr24:23568176-23567993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 156
               

               
Conread position:
               
380-550
               

               
Cow position:
               
chr24:22193624-22193454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 155
               

               
Conread position:
               
388-531
               

               
Cow position:
               
chr24:11874746-11874886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
391-548
               

               
Cow position:
               
chr24:19804573-19804418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
394-550
               

               
Cow position:
               
chr24:18847781-18847628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
396-536
               

               
Cow position:
               
chr24:37975194-37975329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
396-551
               

               
Cow position:
               
chr24:15288737-15288585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
397-550
               

               
Cow position:
               
chr24:28689584-28689439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
398-495
               

               
Cow position:
               
chr24:11769154-11769057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
398-539
               

               
Cow position:
               
chr24:6665604-6665745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
401-536
               

               
Cow position:
               
chr24:28233264-28233129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
401-550
               

               
Cow position:
               
chr24:1271991-1272140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
403-567
               

               
Cow position:
               
chr24:14550378-14550219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
408-550
               

               
Cow position:
               
chr24:32456294-32456155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
409-535
               

               
Cow position:
               
chr24:29606203-29606325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
409-537
               

               
Cow position:
               
chr24:22821881-22821753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
411-536
               

               
Cow position:
               
chr24:20988140-20988259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
411-550
               

               
Cow position:
               
chr24:36711001-36710869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
411-552
               

               
Cow position:
               
chr24:35429813-35429946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
416-537
               

               
Cow position:
               
chr24:16625644-16625761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
416-539
               

               
Cow position:
               
chr24:5849541-5849664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-539
               

               
Cow position:
               
chr24:22317805-22317682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
416-549
               

               
Cow position:
               
chr24:20594207-20594338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
416-550
               

               
Cow position:
               
chr24:15666549-15666680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
418-550
               

               
Cow position:
               
chr24:43692888-43693015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
422-550
               

               
Cow position:
               
chr24:15639046-15639171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
430-536
               

               
Cow position:
               
chr24:11263253-11263144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
437-550
               

               
Cow position:
               
chr24:8021417-8021304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.