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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8049N19.3
        

               
Conread position:
               
305-540
               

               
Cow position:
               
chr25:29196709-29196946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 181
               

               
Conread position:
               
305-788
               

               
Cow position:
               
chr25:29335845-29336349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 318
               

               
Conread position:
               
305-830
               

               
Cow position:
               
chr25:18490435-18490980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 166
               

               
Conread position:
               
306-541
               

               
Cow position:
               
chr25:23325661-23325431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
6, 51
               

               
Conread position:
               
311-830
               

               
Cow position:
               
chr25:18886113-18885577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 175
               

               
Conread position:
               
324-515
               

               
Cow position:
               
chr25:29216749-29216555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
324-594
               

               
Cow position:
               
chr25:25794528-25794256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 230
               

               
Conread position:
               
324-801
               

               
Cow position:
               
chr25:1951047-1951537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
328-470
               

               
Cow position:
               
chr25:41358059-41357917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-515
               

               
Cow position:
               
chr25:20650526-20650712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-627
               

               
Cow position:
               
chr25:3969870-3970161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
329-683
               

               
Cow position:
               
chr25:29312931-29312567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
329-690
               

               
Cow position:
               
chr25:11896103-11895737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 51
               

               
Conread position:
               
329-767
               

               
Cow position:
               
chr25:40793419-40793882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
329-1127
               

               
Cow position:
               
chr25:11956216-11957012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
331-593
               

               
Cow position:
               
chr25:20634007-20634267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
332-691
               

               
Cow position:
               
chr25:20008456-20008823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
333-435
               

               
Cow position:
               
chr25:6607291-6607189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
333-435
               

               
Cow position:
               
chr25:13787359-13787461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
333-473
               

               
Cow position:
               
chr25:18237208-18237347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
333-508
               

               
Cow position:
               
chr25:20403357-20403182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
333-508
               

               
Cow position:
               
chr25:35039493-35039327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
333-515
               

               
Cow position:
               
chr25:18208093-18207910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
333-520
               

               
Cow position:
               
chr25:18321835-18322019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
333-585
               

               
Cow position:
               
chr25:18154423-18154669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
333-617
               

               
Cow position:
               
chr25:28264740-28265023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
227, 78
               

               
Conread position:
               
333-646
               

               
Cow position:
               
chr25:15309401-15309722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
333-662
               

               
Cow position:
               
chr25:23394257-23394581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
333-663
               

               
Cow position:
               
chr25:17420135-17419794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 267
               

               
Conread position:
               
333-663
               

               
Cow position:
               
chr25:30525981-30525650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
333-663
               

               
Cow position:
               
chr25:35561136-35560801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
152, 80
               

               
Conread position:
               
333-675
               

               
Cow position:
               
chr25:24213644-24213296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
164, 48
               

               
Conread position:
               
333-680
               

               
Cow position:
               
chr25:12841699-12841349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 316
               

               
Conread position:
               
333-682
               

               
Cow position:
               
chr25:12219655-12220007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 301
               

               
Conread position:
               
333-692
               

               
Cow position:
               
chr25:11540518-11540864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 171
               

               
Conread position:
               
333-693
               

               
Cow position:
               
chr25:9595708-9596065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 214
               

               
Conread position:
               
333-693
               

               
Cow position:
               
chr25:15465406-15465778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
333-751
               

               
Cow position:
               
chr25:17992752-17992323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 0
               

               
Conread position:
               
333-759
               

               
Cow position:
               
chr25:32607125-32606689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 108
               

               
Conread position:
               
333-766
               

               
Cow position:
               
chr25:9078206-9078647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
212, 21
               

               
Conread position:
               
333-772
               

               
Cow position:
               
chr25:24636749-24636290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 48
               

               
Conread position:
               
333-773
               

               
Cow position:
               
chr25:16801830-16802283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
333-775
               

               
Cow position:
               
chr25:35567495-35567044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 247
               

               
Conread position:
               
333-777
               

               
Cow position:
               
chr25:18181512-18181959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
333-780
               

               
Cow position:
               
chr25:8572480-8572021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 126
               

               
Conread position:
               
333-780
               

               
Cow position:
               
chr25:18323964-18323504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 0
               

               
Conread position:
               
333-780
               

               
Cow position:
               
chr25:25510284-25510741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 229
               

               
Conread position:
               
333-780
               

               
Cow position:
               
chr25:28863264-28863724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 0
               

               
Conread position:
               
333-785
               

               
Cow position:
               
chr25:41097803-41097337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
333-787
               

               
Cow position:
               
chr25:13960454-13960919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 362
               

               
Conread position:
               
333-790
               

               
Cow position:
               
chr25:34343515-34343038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 88
               

               
Conread position:
               
333-791
               

               
Cow position:
               
chr25:24654780-24654309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 442
               

               
Conread position:
               
333-824
               

               
Cow position:
               
chr25:15368076-15368579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 144
               

               
Conread position:
               
333-824
               

               
Cow position:
               
chr25:23672473-23671983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
241, 37
               

               
Conread position:
               
333-824
               

               
Cow position:
               
chr25:23739848-23739357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 37
               

               
Conread position:
               
333-830
               

               
Cow position:
               
chr25:34502292-34501776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 0
               

               
Conread position:
               
333-881
               

               
Cow position:
               
chr25:24227953-24227377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
333-896
               

               
Cow position:
               
chr25:14569759-14570347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 19
               

               
Conread position:
               
333-985
               

               
Cow position:
               
chr25:34013364-34012687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 228
               

               
Conread position:
               
333-1002
               

               
Cow position:
               
chr25:41356407-41355713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 47
               

               
Conread position:
               
334-684
               

               
Cow position:
               
chr25:14568825-14569174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
334-734
               

               
Cow position:
               
chr25:33263034-33263429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 51
               

               
Conread position:
               
335-663
               

               
Cow position:
               
chr25:24406388-24406054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 276
               

               
Conread position:
               
336-680
               

               
Cow position:
               
chr25:5568379-5568025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
336-786
               

               
Cow position:
               
chr25:30621630-30621170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
205, 135
               

               
Conread position:
               
337-657
               

               
Cow position:
               
chr25:12756038-12755718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 42
               

               
Conread position:
               
337-663
               

               
Cow position:
               
chr25:35625840-35625515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 144
               

               
Conread position:
               
337-680
               

               
Cow position:
               
chr25:33979020-33978669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 168
               

               
Conread position:
               
337-777
               

               
Cow position:
               
chr25:38606937-38606490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
189, 352
               

               
Conread position:
               
337-810
               

               
Cow position:
               
chr25:22708942-22709426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
337-1002
               

               
Cow position:
               
chr25:26681961-26682652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 43
               

               
Conread position:
               
338-692
               

               
Cow position:
               
chr25:2595381-2595740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 174
               

               
Conread position:
               
339-667
               

               
Cow position:
               
chr25:13941338-13941009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
340-665
               

               
Cow position:
               
chr25:36754929-36755259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 252
               

               
Conread position:
               
340-693
               

               
Cow position:
               
chr25:35337334-35337695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
341-657
               

               
Cow position:
               
chr25:41350007-41349695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
341-686
               

               
Cow position:
               
chr25:2500156-2500499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
341-860
               

               
Cow position:
               
chr25:41354885-41354370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
341-879
               

               
Cow position:
               
chr25:394743-395313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 187
               

               
Conread position:
               
342-480
               

               
Cow position:
               
chr25:24204730-24204593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
342-488
               

               
Cow position:
               
chr25:23367369-23367515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
342-503
               

               
Cow position:
               
chr25:26939363-26939201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
342-508
               

               
Cow position:
               
chr25:22111698-22111851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
342-513
               

               
Cow position:
               
chr25:15694100-15694275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
342-515
               

               
Cow position:
               
chr25:18269861-18270027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
342-537
               

               
Cow position:
               
chr25:20006847-20007037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
342-541
               

               
Cow position:
               
chr25:13446793-13446596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
342-545
               

               
Cow position:
               
chr25:22711688-22711893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
342-594
               

               
Cow position:
               
chr25:17352078-17352334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
211, 37
               

               
Conread position:
               
342-630
               

               
Cow position:
               
chr25:22760296-22760583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
342-631
               

               
Cow position:
               
chr25:20786131-20785841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 0
               

               
Conread position:
               
342-654
               

               
Cow position:
               
chr25:18474595-18474910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
342-657
               

               
Cow position:
               
chr25:38190341-38190660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
213, 41
               

               
Conread position:
               
342-660
               

               
Cow position:
               
chr25:36757529-36757841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
214, 156
               

               
Conread position:
               
342-662
               

               
Cow position:
               
chr25:13962208-13962527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
342-663
               

               
Cow position:
               
chr25:23772872-23772566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
297, 53
               

               
Conread position:
               
342-663
               

               
Cow position:
               
chr25:35612934-35612614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
342-671
               

               
Cow position:
               
chr25:17562467-17562796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 292
               

               
Conread position:
               
342-680
               

               
Cow position:
               
chr25:15024569-15024904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 233
               

               
Conread position:
               
342-682
               

               
Cow position:
               
chr25:34237192-34236843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
342-692
               

               
Cow position:
               
chr25:41121406-41121760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 194
               

               
Conread position:
               
342-693
               

               
Cow position:
               
chr25:9178836-9178482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
154, 321
               

               
Conread position:
               
342-693
               

               
Cow position:
               
chr25:11960934-11961299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
342-693
               

               
Cow position:
               
chr25:17658969-17659309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 43
               

               
Conread position:
               
342-693
               

               
Cow position:
               
chr25:21018077-21017720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
342-734
               

               
Cow position:
               
chr25:36962601-36962188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
342-750
               

               
Cow position:
               
chr25:17553866-17553446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 412
               

               
Conread position:
               
342-763
               

               
Cow position:
               
chr25:39386431-39386001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 220
               

               
Conread position:
               
342-769
               

               
Cow position:
               
chr25:41385699-41385269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 29
               

               
Conread position:
               
342-776
               

               
Cow position:
               
chr25:34673178-34672747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 68
               

               
Conread position:
               
342-777
               

               
Cow position:
               
chr25:24669222-24668780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
205, 47
               

               
Conread position:
               
342-777
               

               
Cow position:
               
chr25:25480235-25479783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 211
               

               
Conread position:
               
342-787
               

               
Cow position:
               
chr25:34659700-34659248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 165
               

               
Conread position:
               
342-790
               

               
Cow position:
               
chr25:14823340-14822894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 203
               

               
Conread position:
               
342-792
               

               
Cow position:
               
chr25:27231751-27232196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 129
               

               
Conread position:
               
342-822
               

               
Cow position:
               
chr25:15005605-15006096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 76
               

               
Conread position:
               
342-824
               

               
Cow position:
               
chr25:16430627-16430133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 50
               

               
Conread position:
               
342-830
               

               
Cow position:
               
chr25:35446345-35446843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 24
               

               
Conread position:
               
342-831
               

               
Cow position:
               
chr25:18448241-18448746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 50
               

               
Conread position:
               
342-876
               

               
Cow position:
               
chr25:41364566-41364028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 28
               

               
Conread position:
               
342-884
               

               
Cow position:
               
chr25:10012655-10012080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 40
               

               
Conread position:
               
342-889
               

               
Cow position:
               
chr25:41366756-41366200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
342-940
               

               
Cow position:
               
chr25:25826857-25827489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
342-969
               

               
Cow position:
               
chr25:11666066-11666697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 241
               

               
Conread position:
               
342-1035
               

               
Cow position:
               
chr25:21950531-21951245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 109
               

               
Conread position:
               
342-1046
               

               
Cow position:
               
chr25:2498671-2499394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 30
               

               
Conread position:
               
342-1112
               

               
Cow position:
               
chr25:16922392-16921600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
597
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 99
               

               
Conread position:
               
342-1113
               

               
Cow position:
               
chr25:17658016-17658806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
592
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
342-1127
               

               
Cow position:
               
chr25:11584912-11585741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
586
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 141
               

               
Conread position:
               
342-1135
               

               
Cow position:
               
chr25:36392565-36391722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
848
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 274
               

               
Conread position:
               
343-663
               

               
Cow position:
               
chr25:26914642-26914949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 37
               

               
Conread position:
               
345-477
               

               
Cow position:
               
chr25:27521875-27521745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
345-486
               

               
Cow position:
               
chr25:27621052-27621193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-528
               

               
Cow position:
               
chr25:2370035-2370225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
345-565
               

               
Cow position:
               
chr25:14625528-14625312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
345-579
               

               
Cow position:
               
chr25:41135351-41135117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-586
               

               
Cow position:
               
chr25:24669961-24669716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
345-590
               

               
Cow position:
               
chr25:9055066-9055313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
345-625
               

               
Cow position:
               
chr25:24990245-24989967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
345-630
               

               
Cow position:
               
chr25:23356908-23357195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
345-634
               

               
Cow position:
               
chr25:19367292-19367001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
345-643
               

               
Cow position:
               
chr25:3788550-3788249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
184, 68
               

               
Conread position:
               
345-663
               

               
Cow position:
               
chr25:24302860-24302535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
345-669
               

               
Cow position:
               
chr25:24779003-24779323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 269
               

               
Conread position:
               
345-682
               

               
Cow position:
               
chr25:37593810-37594135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 81
               

               
Conread position:
               
345-689
               

               
Cow position:
               
chr25:18265597-18265939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 33
               

               
Conread position:
               
345-692
               

               
Cow position:
               
chr25:18023161-18023511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
197, 97
               

               
Conread position:
               
345-693
               

               
Cow position:
               
chr25:18486881-18487228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 66
               

               
Conread position:
               
345-693
               

               
Cow position:
               
chr25:40429849-40429489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 158
               

               
Conread position:
               
345-729
               

               
Cow position:
               
chr25:20613943-20614326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
345-750
               

               
Cow position:
               
chr25:32278630-32278212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
345-761
               

               
Cow position:
               
chr25:21562550-21562123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
345-777
               

               
Cow position:
               
chr25:4000507-4000956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
220, 198
               

               
Conread position:
               
345-777
               

               
Cow position:
               
chr25:10580687-10580235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 0
               

               
Conread position:
               
345-782
               

               
Cow position:
               
chr25:34164155-34163711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 322
               

               
Conread position:
               
345-787
               

               
Cow position:
               
chr25:17994891-17994436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 388
               

               
Conread position:
               
345-787
               

               
Cow position:
               
chr25:26282431-26282880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 336
               

               
Conread position:
               
345-791
               

               
Cow position:
               
chr25:16136562-16137016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 43
               

               
Conread position:
               
345-818
               

               
Cow position:
               
chr25:20495937-20496429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 67
               

               
Conread position:
               
345-823
               

               
Cow position:
               
chr25:37469195-37469672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
345-881
               

               
Cow position:
               
chr25:35077263-35076727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 227
               

               
Conread position:
               
345-895
               

               
Cow position:
               
chr25:13332820-13333400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 245
               

               
Conread position:
               
345-928
               

               
Cow position:
               
chr25:11054345-11054911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 34
               

               
Conread position:
               
345-1015
               

               
Cow position:
               
chr25:2047153-2046465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
345-1023
               

               
Cow position:
               
chr25:2135766-2136453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 209
               

               
Conread position:
               
345-1053
               

               
Cow position:
               
chr25:40321882-40321156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 34
               

               
Conread position:
               
345-1116
               

               
Cow position:
               
chr25:18721667-18720930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 47
               

               
Conread position:
               
345-1116
               

               
Cow position:
               
chr25:30279805-30279000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 103
               

               
Conread position:
               
346-536
               

               
Cow position:
               
chr25:29351580-29351391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
346-820
               

               
Cow position:
               
chr25:23410060-23410558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 483
               

               
Conread position:
               
346-884
               

               
Cow position:
               
chr25:33838781-33839344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
347-477
               

               
Cow position:
               
chr25:13967553-13967423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
347-513
               

               
Cow position:
               
chr25:3688544-3688710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
347-513
               

               
Cow position:
               
chr25:16571658-16571824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
347-514
               

               
Cow position:
               
chr25:7800420-7800589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
347-661
               

               
Cow position:
               
chr25:33466374-33466691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
347-692
               

               
Cow position:
               
chr25:18189970-18189622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 206
               

               
Conread position:
               
347-693
               

               
Cow position:
               
chr25:14756006-14755667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 171
               

               
Conread position:
               
347-776
               

               
Cow position:
               
chr25:3968813-3969237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 165
               

               
Conread position:
               
347-777
               

               
Cow position:
               
chr25:36765892-36765457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 362
               

               
Conread position:
               
347-782
               

               
Cow position:
               
chr25:380560-380131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 187
               

               
Conread position:
               
347-782
               

               
Cow position:
               
chr25:4858089-4857641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 0
               

               
Conread position:
               
347-782
               

               
Cow position:
               
chr25:13955981-13955533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 0
               

               
Conread position:
               
347-782
               

               
Cow position:
               
chr25:27017590-27017141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
347-782
               

               
Cow position:
               
chr25:36127499-36127048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
347-825
               

               
Cow position:
               
chr25:28920284-28920793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 243
               

               
Conread position:
               
347-1040
               

               
Cow position:
               
chr25:27531851-27531151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 58
               

               
Conread position:
               
348-713
               

               
Cow position:
               
chr25:22935471-22935836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
209, 34
               

               
Conread position:
               
350-447
               

               
Cow position:
               
chr25:15689302-15689207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
350-541
               

               
Cow position:
               
chr25:15284993-15285185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
120, 174
               

               
Conread position:
               
350-612
               

               
Cow position:
               
chr25:26931966-26932227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
350-655
               

               
Cow position:
               
chr25:8935208-8935513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 202
               

               
Conread position:
               
350-678
               

               
Cow position:
               
chr25:14393693-14393375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
194, 47
               

               
Conread position:
               
350-682
               

               
Cow position:
               
chr25:8142118-8141780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
84, 165
               

               
Conread position:
               
350-690
               

               
Cow position:
               
chr25:15453113-15452770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 203
               

               
Conread position:
               
350-693
               

               
Cow position:
               
chr25:15429268-15428922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 203
               

               
Conread position:
               
350-693
               

               
Cow position:
               
chr25:18658312-18658656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 80
               

               
Conread position:
               
350-693
               

               
Cow position:
               
chr25:27145834-27146189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 211
               

               
Conread position:
               
350-780
               

               
Cow position:
               
chr25:10158153-10158596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 202
               

               
Conread position:
               
350-780
               

               
Cow position:
               
chr25:22197993-22198436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 202
               

               
Conread position:
               
350-780
               

               
Cow position:
               
chr25:23601532-23601089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 203
               

               
Conread position:
               
350-780
               

               
Cow position:
               
chr25:35649244-35649687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 202
               

               
Conread position:
               
350-782
               

               
Cow position:
               
chr25:10896321-10895876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 203
               

               
Conread position:
               
350-782
               

               
Cow position:
               
chr25:14555079-14555524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 202
               

               
Conread position:
               
350-789
               

               
Cow position:
               
chr25:27076469-27076921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 202
               

               
Conread position:
               
350-806
               

               
Cow position:
               
chr25:12839874-12840318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
280, 31
               

               
Conread position:
               
350-809
               

               
Cow position:
               
chr25:37687745-37687283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
350-1021
               

               
Cow position:
               
chr25:34672282-34671609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
350-1082
               

               
Cow position:
               
chr25:33901971-33901228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 203
               

               
Conread position:
               
350-1151
               

               
Cow position:
               
chr25:10408017-10407183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
602
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 199
               

               
Conread position:
               
351-1002
               

               
Cow position:
               
chr25:17599085-17598411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 69
               

               
Conread position:
               
351-1127
               

               
Cow position:
               
chr25:33959836-33959042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 141
               

               
Conread position:
               
352-1015
               

               
Cow position:
               
chr25:17682367-17681681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
353-508
               

               
Cow position:
               
chr25:11044030-11044185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
354-475
               

               
Cow position:
               
chr25:19336911-19336790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
354-515
               

               
Cow position:
               
chr25:24800246-24800403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
354-559
               

               
Cow position:
               
chr25:18330360-18330151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 202
               

               
Conread position:
               
354-561
               

               
Cow position:
               
chr25:21120729-21120934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
171, 124
               

               
Conread position:
               
354-598
               

               
Cow position:
               
chr25:19530960-19530715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 198
               

               
Conread position:
               
354-692
               

               
Cow position:
               
chr25:34508766-34508425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
354-693
               

               
Cow position:
               
chr25:7068936-7069278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:12753501-12753066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 198
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:15618113-15618552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 98
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:17808363-17807926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 81
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:17994107-17993667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 180
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:19139156-19138716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 86
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:20771921-20771482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 130
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:26755883-26756324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:29525452-29525011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 205
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:32610004-32609563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:33990252-33989813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 213
               

               
Conread position:
               
354-782
               

               
Cow position:
               
chr25:35554084-35554534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
354-785
               

               
Cow position:
               
chr25:36351154-36351597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
354-789
               

               
Cow position:
               
chr25:34121678-34121230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
354-825
               

               
Cow position:
               
chr25:17210719-17210248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
354-1002
               

               
Cow position:
               
chr25:8231472-8230800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 522
               

               
Conread position:
               
355-560
               

               
Cow position:
               
chr25:10137241-10137446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
355-895
               

               
Cow position:
               
chr25:12203880-12204447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 0
               

               
Conread position:
               
357-648
               

               
Cow position:
               
chr25:5823880-5824172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 139
               

               
Conread position:
               
358-479
               

               
Cow position:
               
chr25:16401312-16401190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
358-496
               

               
Cow position:
               
chr25:3140659-3140796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
358-507
               

               
Cow position:
               
chr25:17191742-17191593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
358-515
               

               
Cow position:
               
chr25:9413763-9413919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
358-515
               

               
Cow position:
               
chr25:17585596-17585438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
358-518
               

               
Cow position:
               
chr25:33253947-33253787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
358-530
               

               
Cow position:
               
chr25:21209772-21209591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
358-568
               

               
Cow position:
               
chr25:30636333-30636127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
358-614
               

               
Cow position:
               
chr25:24222559-24222298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
198, 172
               

               
Conread position:
               
358-658
               

               
Cow position:
               
chr25:40057008-40056717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
358-665
               

               
Cow position:
               
chr25:24083822-24083512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 73
               

               
Conread position:
               
358-682
               

               
Cow position:
               
chr25:12081937-12081616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
358-727
               

               
Cow position:
               
chr25:2624064-2624436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 34
               

               
Conread position:
               
358-779
               

               
Cow position:
               
chr25:8655709-8656143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 194
               

               
Conread position:
               
358-780
               

               
Cow position:
               
chr25:28275027-28274602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 99
               

               
Conread position:
               
358-782
               

               
Cow position:
               
chr25:7717359-7717794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 194
               

               
Conread position:
               
358-782
               

               
Cow position:
               
chr25:19923939-19924374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 192
               

               
Conread position:
               
358-782
               

               
Cow position:
               
chr25:26923263-26923700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 198
               

               
Conread position:
               
358-782
               

               
Cow position:
               
chr25:29802325-29801888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 351
               

               
Conread position:
               
358-782
               

               
Cow position:
               
chr25:36554436-36554856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
358-785
               

               
Cow position:
               
chr25:14954627-14954173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 213
               

               
Conread position:
               
358-793
               

               
Cow position:
               
chr25:36871273-36871720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
358-807
               

               
Cow position:
               
chr25:10367256-10366810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 98
               

               
Conread position:
               
358-819
               

               
Cow position:
               
chr25:10749085-10748610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
358-879
               

               
Cow position:
               
chr25:9395863-9396405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 520
               

               
Conread position:
               
358-1116
               

               
Cow position:
               
chr25:36747023-36746251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 122
               

               
Conread position:
               
358-1128
               

               
Cow position:
               
chr25:4522399-4521632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 41
               

               
Conread position:
               
358-1133
               

               
Cow position:
               
chr25:8120191-8120996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
584
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 546
               

               
Conread position:
               
358-1143
               

               
Cow position:
               
chr25:22314631-22315429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 46
               

               
Conread position:
               
359-540
               

               
Cow position:
               
chr25:11970476-11970293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
359-556
               

               
Cow position:
               
chr25:34445093-34445291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
359-676
               

               
Cow position:
               
chr25:26228009-26228326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 128
               

               
Conread position:
               
359-693
               

               
Cow position:
               
chr25:5611223-5611565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
359-791
               

               
Cow position:
               
chr25:8098557-8098992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
360-693
               

               
Cow position:
               
chr25:15247072-15247397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
360-779
               

               
Cow position:
               
chr25:26791452-26791877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 19
               

               
Conread position:
               
360-785
               

               
Cow position:
               
chr25:18578760-18579175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 195
               

               
Conread position:
               
361-626
               

               
Cow position:
               
chr25:29523968-29523688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
361-693
               

               
Cow position:
               
chr25:28188564-28188234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 80
               

               
Conread position:
               
361-761
               

               
Cow position:
               
chr25:13132187-13132591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 121
               

               
Conread position:
               
361-860
               

               
Cow position:
               
chr25:35608302-35607784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 17
               

               
Conread position:
               
362-647
               

               
Cow position:
               
chr25:31675853-31676134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
362-657
               

               
Cow position:
               
chr25:36149371-36149075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 223
               

               
Conread position:
               
362-663
               

               
Cow position:
               
chr25:17450273-17449978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
202, 21
               

               
Conread position:
               
362-676
               

               
Cow position:
               
chr25:18424713-18425023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
195, 83
               

               
Conread position:
               
362-777
               

               
Cow position:
               
chr25:16870893-16870474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
362-819
               

               
Cow position:
               
chr25:20248734-20249190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
192, 94
               

               
Conread position:
               
363-531
               

               
Cow position:
               
chr25:33687555-33687386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
363-667
               

               
Cow position:
               
chr25:13815769-13815473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
363-785
               

               
Cow position:
               
chr25:13429702-13429277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 75
               

               
Conread position:
               
364-680
               

               
Cow position:
               
chr25:27510839-27510522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
367-540
               

               
Cow position:
               
chr25:14254383-14254550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
367-685
               

               
Cow position:
               
chr25:8919108-8918799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
367-803
               

               
Cow position:
               
chr25:4488161-4488608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 106
               

               
Conread position:
               
368-555
               

               
Cow position:
               
chr25:28328030-28327845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
369-540
               

               
Cow position:
               
chr25:36080698-36080868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
369-884
               

               
Cow position:
               
chr25:27504747-27504212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 14
               

               
Conread position:
               
369-885
               

               
Cow position:
               
chr25:24137030-24136473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
370-895
               

               
Cow position:
               
chr25:2110516-2111043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 49
               

               
Conread position:
               
370-1088
               

               
Cow position:
               
chr25:33255814-33256534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 49
               

               
Conread position:
               
371-662
               

               
Cow position:
               
chr25:27535510-27535220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 21
               

               
Conread position:
               
371-682
               

               
Cow position:
               
chr25:26456132-26456460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
371-693
               

               
Cow position:
               
chr25:39313460-39313136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 59
               

               
Conread position:
               
371-782
               

               
Cow position:
               
chr25:25873560-25873136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 182
               

               
Conread position:
               
371-880
               

               
Cow position:
               
chr25:20394626-20395153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
372-663
               

               
Cow position:
               
chr25:36887102-36886814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
188, 20
               

               
Conread position:
               
372-693
               

               
Cow position:
               
chr25:30666327-30665997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
372-750
               

               
Cow position:
               
chr25:27543576-27543205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
373-751
               

               
Cow position:
               
chr25:31514555-31514936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
23, 177
               

               
Conread position:
               
373-763
               

               
Cow position:
               
chr25:19131466-19131872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
374-517
               

               
Cow position:
               
chr25:30601658-30601515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
374-582
               

               
Cow position:
               
chr25:2516733-2516937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
374-594
               

               
Cow position:
               
chr25:34122873-34122653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
374-665
               

               
Cow position:
               
chr25:4336961-4337257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
171, 46
               

               
Conread position:
               
374-692
               

               
Cow position:
               
chr25:166914-167239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
374-692
               

               
Cow position:
               
chr25:9044959-9045282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
180, 57
               

               
Conread position:
               
374-693
               

               
Cow position:
               
chr25:30019705-30019388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
374-766
               

               
Cow position:
               
chr25:38903464-38903070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 87
               

               
Conread position:
               
374-767
               

               
Cow position:
               
chr25:26896491-26896873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 30
               

               
Conread position:
               
374-1025
               

               
Cow position:
               
chr25:20075928-20076602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 120
               

               
Conread position:
               
374-1103
               

               
Cow position:
               
chr25:23829682-23828946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
375-675
               

               
Cow position:
               
chr25:14808540-14808840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
375-693
               

               
Cow position:
               
chr25:14957812-14957489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 139
               

               
Conread position:
               
375-761
               

               
Cow position:
               
chr25:18549429-18549046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
375-840
               

               
Cow position:
               
chr25:40657736-40658218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 26
               

               
Conread position:
               
375-931
               

               
Cow position:
               
chr25:40389019-40388454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 119
               

               
Conread position:
               
376-899
               

               
Cow position:
               
chr25:26756863-26757419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
377-508
               

               
Cow position:
               
chr25:20060618-20060487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-767
               

               
Cow position:
               
chr25:4830-5231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 175
               

               
Conread position:
               
377-1116
               

               
Cow position:
               
chr25:14834228-14833471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 117
               

               
Conread position:
               
378-782
               

               
Cow position:
               
chr25:15412460-15412877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 174
               

               
Conread position:
               
378-881
               

               
Cow position:
               
chr25:38357550-38358061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
380-777
               

               
Cow position:
               
chr25:35589511-35589919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 172
               

               
Conread position:
               
380-1113
               

               
Cow position:
               
chr25:35347343-35348100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 21
               

               
Conread position:
               
381-541
               

               
Cow position:
               
chr25:20459881-20460041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
383-641
               

               
Cow position:
               
chr25:17678966-17678714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
187, 37
               

               
Conread position:
               
383-691
               

               
Cow position:
               
chr25:13444186-13443882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
198, 37
               

               
Conread position:
               
383-693
               

               
Cow position:
               
chr25:16033148-16033469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 255
               

               
Conread position:
               
383-693
               

               
Cow position:
               
chr25:21277562-21277871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
164, 6
               

               
Conread position:
               
383-775
               

               
Cow position:
               
chr25:18082597-18082195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 43
               

               
Conread position:
               
383-984
               

               
Cow position:
               
chr25:25754558-25753932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 300
               

               
Conread position:
               
384-541
               

               
Cow position:
               
chr25:447480-447324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
384-679
               

               
Cow position:
               
chr25:18072654-18072942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
385-576
               

               
Cow position:
               
chr25:32849759-32849569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
385-691
               

               
Cow position:
               
chr25:33322682-33322989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
136, 115
               

               
Conread position:
               
385-691
               

               
Cow position:
               
chr25:35047495-35047803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
181, 109
               

               
Conread position:
               
385-692
               

               
Cow position:
               
chr25:26869603-26869913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
385-693
               

               
Cow position:
               
chr25:9938091-9937778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 103
               

               
Conread position:
               
385-736
               

               
Cow position:
               
chr25:19142950-19142593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
163, 73
               

               
Conread position:
               
385-761
               

               
Cow position:
               
chr25:35037423-35037044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
385-782
               

               
Cow position:
               
chr25:12943584-12943174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 168
               

               
Conread position:
               
386-534
               

               
Cow position:
               
chr25:32190910-32191063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr25:9625261-9625654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 46
               

               
Conread position:
               
387-792
               

               
Cow position:
               
chr25:26353317-26352904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 180
               

               
Conread position:
               
388-693
               

               
Cow position:
               
chr25:23778194-23777877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
159, 5
               

               
Conread position:
               
388-725
               

               
Cow position:
               
chr25:26939816-26940155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 164
               

               
Conread position:
               
389-759
               

               
Cow position:
               
chr25:26210432-26210810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 202
               

               
Conread position:
               
392-693
               

               
Cow position:
               
chr25:4401934-4401630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 161
               

               
Conread position:
               
393-594
               

               
Cow position:
               
chr25:23914391-23914597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
393-669
               

               
Cow position:
               
chr25:41104760-41104490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
153, 32
               

               
Conread position:
               
393-679
               

               
Cow position:
               
chr25:18310224-18310509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 124
               

               
Conread position:
               
393-779
               

               
Cow position:
               
chr25:38439610-38440010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
393-824
               

               
Cow position:
               
chr25:21903887-21904324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 115
               

               
Conread position:
               
393-1049
               

               
Cow position:
               
chr25:26238323-26238992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 33
               

               
Conread position:
               
395-488
               

               
Cow position:
               
chr25:41106952-41107045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
395-513
               

               
Cow position:
               
chr25:22911304-22911186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
395-661
               

               
Cow position:
               
chr25:5309097-5308823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
395-665
               

               
Cow position:
               
chr25:30412493-30412218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
396-782
               

               
Cow position:
               
chr25:34257440-34257839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 0
               

               
Conread position:
               
396-1136
               

               
Cow position:
               
chr25:1837698-1838458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 98
               

               
Conread position:
               
397-693
               

               
Cow position:
               
chr25:18681056-18681350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
399-761
               

               
Cow position:
               
chr25:35331060-35330684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
400-690
               

               
Cow position:
               
chr25:1785418-1785712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
150, 229
               

               
Conread position:
               
402-745
               

               
Cow position:
               
chr25:21041279-21041633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 231
               

               
Conread position:
               
403-682
               

               
Cow position:
               
chr25:36512758-36513048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
99, 282
               

               
Conread position:
               
403-813
               

               
Cow position:
               
chr25:6893954-6894376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 133
               

               
Conread position:
               
405-761
               

               
Cow position:
               
chr25:3895552-3895916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
408-1015
               

               
Cow position:
               
chr25:22413015-22412383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 143
               

               
Conread position:
               
409-663
               

               
Cow position:
               
chr25:9647358-9647616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 29
               

               
Conread position:
               
409-762
               

               
Cow position:
               
chr25:25547057-25547423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
410-661
               

               
Cow position:
               
chr25:11929096-11928839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 199
               

               
Conread position:
               
410-676
               

               
Cow position:
               
chr25:12472992-12473253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
135, 21
               

               
Conread position:
               
411-761
               

               
Cow position:
               
chr25:14648070-14647712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
131, 56
               

               
Conread position:
               
411-776
               

               
Cow position:
               
chr25:37638184-37637810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
249, 168
               

               
Conread position:
               
411-810
               

               
Cow position:
               
chr25:35586056-35585634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
144, 29
               

               
Conread position:
               
412-658
               

               
Cow position:
               
chr25:9268636-9268883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
412-777
               

               
Cow position:
               
chr25:28242458-28242806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
259, 32
               

               
Conread position:
               
412-842
               

               
Cow position:
               
chr25:31586511-31586958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 159
               

               
Conread position:
               
412-1136
               

               
Cow position:
               
chr25:24572539-24573276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
413-793
               

               
Cow position:
               
chr25:22730134-22730504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 7
               

               
Conread position:
               
414-581
               

               
Cow position:
               
chr25:41384581-41384416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
414-747
               

               
Cow position:
               
chr25:598803-599149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 174
               

               
Conread position:
               
414-782
               

               
Cow position:
               
chr25:12318368-12317988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
414-813
               

               
Cow position:
               
chr25:29308704-29309124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 111
               

               
Conread position:
               
414-888
               

               
Cow position:
               
chr25:26111754-26112237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 165
               

               
Conread position:
               
415-540
               

               
Cow position:
               
chr25:36798695-36798569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
415-624
               

               
Cow position:
               
chr25:11317981-11318182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
415-637
               

               
Cow position:
               
chr25:18250196-18249966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
416-881
               

               
Cow position:
               
chr25:6892054-6891564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
417-824
               

               
Cow position:
               
chr25:4049506-4049928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
418-540
               

               
Cow position:
               
chr25:7479035-7479160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
418-755
               

               
Cow position:
               
chr25:23571509-23571153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
419-1060
               

               
Cow position:
               
chr25:12117481-12116861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
419-1125
               

               
Cow position:
               
chr25:11437327-11436616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 401
               

               
Conread position:
               
420-742
               

               
Cow position:
               
chr25:2702444-2702121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
420-777
               

               
Cow position:
               
chr25:15205648-15206012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
127, 181
               

               
Conread position:
               
420-885
               

               
Cow position:
               
chr25:22550116-22549677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 87
               

               
Conread position:
               
422-711
               

               
Cow position:
               
chr25:24168450-24168159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 88
               

               
Conread position:
               
423-510
               

               
Cow position:
               
chr25:12522123-12522036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-693
               

               
Cow position:
               
chr25:15006700-15006966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
425-690
               

               
Cow position:
               
chr25:32824142-32823881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 114
               

               
Conread position:
               
426-690
               

               
Cow position:
               
chr25:40906794-40906527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 102
               

               
Conread position:
               
426-831
               

               
Cow position:
               
chr25:6606858-6606452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 61
               

               
Conread position:
               
428-598
               

               
Cow position:
               
chr25:22435288-22435112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
429-651
               

               
Cow position:
               
chr25:18158503-18158723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
430-653
               

               
Cow position:
               
chr25:40338044-40338267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
431-534
               

               
Cow position:
               
chr25:12540947-12540843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
431-690
               

               
Cow position:
               
chr25:14774624-14774887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 166
               

               
Conread position:
               
431-693
               

               
Cow position:
               
chr25:14618263-14617990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
431-769
               

               
Cow position:
               
chr25:24663513-24663162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
116, 163
               

               
Conread position:
               
432-758
               

               
Cow position:
               
chr25:34000172-34000505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 311
               

               
Conread position:
               
432-766
               

               
Cow position:
               
chr25:27226434-27226781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
115, 189
               

               
Conread position:
               
433-601
               

               
Cow position:
               
chr25:35579548-35579716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 119
               

               
Conread position:
               
433-777
               

               
Cow position:
               
chr25:14960218-14959858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 163
               

               
Conread position:
               
433-932
               

               
Cow position:
               
chr25:36778988-36779512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 19
               

               
Conread position:
               
433-987
               

               
Cow position:
               
chr25:9349775-9349216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 343
               

               
Conread position:
               
434-680
               

               
Cow position:
               
chr25:7819663-7819413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
434-697
               

               
Cow position:
               
chr25:10633224-10632943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
435-663
               

               
Cow position:
               
chr25:570906-570680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 117
               

               
Conread position:
               
435-1112
               

               
Cow position:
               
chr25:14791249-14791947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 125
               

               
Conread position:
               
436-628
               

               
Cow position:
               
chr25:16002261-16002063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
436-845
               

               
Cow position:
               
chr25:10011233-10010796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 395
               

               
Conread position:
               
438-707
               

               
Cow position:
               
chr25:26120285-26120012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
439-689
               

               
Cow position:
               
chr25:24115733-24115491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
188, 53
               

               
Conread position:
               
439-761
               

               
Cow position:
               
chr25:32700703-32700359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 170
               

               
Conread position:
               
440-777
               

               
Cow position:
               
chr25:4860951-4860599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
440-808
               

               
Cow position:
               
chr25:33025585-33025200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
440-1137
               

               
Cow position:
               
chr25:3992286-3992993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 387
               

               
Conread position:
               
442-693
               

               
Cow position:
               
chr25:5154986-5154733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
105, 216
               

               
Conread position:
               
442-777
               

               
Cow position:
               
chr25:28700349-28700006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
445-1137
               

               
Cow position:
               
chr25:26654406-26655129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 174
               

               
Conread position:
               
446-663
               

               
Cow position:
               
chr25:8080353-8080569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
451-663
               

               
Cow position:
               
chr25:38135230-38135444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
103, 140
               

               
Conread position:
               
451-1015
               

               
Cow position:
               
chr25:13787458-13788047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 101
               

               
Conread position:
               
452-933
               

               
Cow position:
               
chr25:4002311-4002814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
453-646
               

               
Cow position:
               
chr25:6476026-6475833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
92, 102
               

               
Conread position:
               
453-680
               

               
Cow position:
               
chr25:13736894-13736668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
219, 90
               

               
Conread position:
               
453-690
               

               
Cow position:
               
chr25:11678918-11678673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
453-1043
               

               
Cow position:
               
chr25:13569663-13569053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
456-693
               

               
Cow position:
               
chr25:18285736-18285496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
457-663
               

               
Cow position:
               
chr25:35296269-35296061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
95, 133
               

               
Conread position:
               
457-693
               

               
Cow position:
               
chr25:16316296-16316546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
458-782
               

               
Cow position:
               
chr25:19339327-19339662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
458-782
               

               
Cow position:
               
chr25:19586819-19586483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
458-782
               

               
Cow position:
               
chr25:28272828-28273166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
458-1097
               

               
Cow position:
               
chr25:18294801-18294133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 440
               

               
Conread position:
               
459-819
               

               
Cow position:
               
chr25:25866443-25866818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 138
               

               
Conread position:
               
460-888
               

               
Cow position:
               
chr25:18160827-18161254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
461-739
               

               
Cow position:
               
chr25:8659603-8659300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
461-1109
               

               
Cow position:
               
chr25:10504820-10504145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
462-693
               

               
Cow position:
               
chr25:20652454-20652220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
83, 91
               

               
Conread position:
               
462-777
               

               
Cow position:
               
chr25:8482795-8482467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
462-1033
               

               
Cow position:
               
chr25:6226570-6227148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 173
               

               
Conread position:
               
462-1051
               

               
Cow position:
               
chr25:3145366-3145974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 19
               

               
Conread position:
               
463-594
               

               
Cow position:
               
chr25:13796736-13796873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
463-692
               

               
Cow position:
               
chr25:11826986-11826753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
463-830
               

               
Cow position:
               
chr25:6740340-6740721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
464-782
               

               
Cow position:
               
chr25:13967143-13966813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 89
               

               
Conread position:
               
465-638
               

               
Cow position:
               
chr25:13472244-13472064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
465-751
               

               
Cow position:
               
chr25:14720012-14720301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 47
               

               
Conread position:
               
465-761
               

               
Cow position:
               
chr25:32899291-32898976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
466-579
               

               
Cow position:
               
chr25:35048285-35048176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
466-633
               

               
Cow position:
               
chr25:27521615-27521449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
466-662
               

               
Cow position:
               
chr25:18129996-18130195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
466-782
               

               
Cow position:
               
chr25:5461697-5462026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 86
               

               
Conread position:
               
466-1039
               

               
Cow position:
               
chr25:11662291-11661697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 48
               

               
Conread position:
               
469-579
               

               
Cow position:
               
chr25:16400916-16400807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
470-996
               

               
Cow position:
               
chr25:8576218-8576770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 238
               

               
Conread position:
               
472-932
               

               
Cow position:
               
chr25:5792274-5791789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 155
               

               
Conread position:
               
472-933
               

               
Cow position:
               
chr25:12824501-12824005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
473-899
               

               
Cow position:
               
chr25:35339864-35340307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 348
               

               
Conread position:
               
474-792
               

               
Cow position:
               
chr25:6118310-6117981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
189, 144
               

               
Conread position:
               
476-1015
               

               
Cow position:
               
chr25:6988305-6987762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 231
               

               
Conread position:
               
477-881
               

               
Cow position:
               
chr25:27593840-27594260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
188, 50
               

               
Conread position:
               
478-1106
               

               
Cow position:
               
chr25:27868344-27868998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 156
               

               
Conread position:
               
479-1054
               

               
Cow position:
               
chr25:22530823-22531415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 108
               

               
Conread position:
               
484-693
               

               
Cow position:
               
chr25:16694303-16694096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 116
               

               
Conread position:
               
485-633
               

               
Cow position:
               
chr25:10867442-10867589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
485-829
               

               
Cow position:
               
chr25:16738400-16738034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 180
               

               
Conread position:
               
490-1004
               

               
Cow position:
               
chr25:5538968-5539506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 62
               

               
Conread position:
               
491-733
               

               
Cow position:
               
chr25:30267907-30268168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
491-777
               

               
Cow position:
               
chr25:30817119-30817416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 45
               

               
Conread position:
               
491-831
               

               
Cow position:
               
chr25:26911212-26910851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
491-889
               

               
Cow position:
               
chr25:20060481-20060058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
493-638
               

               
Cow position:
               
chr25:18237343-18237494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
493-792
               

               
Cow position:
               
chr25:34156223-34156533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
494-808
               

               
Cow position:
               
chr25:11056428-11056760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 169
               

               
Conread position:
               
494-809
               

               
Cow position:
               
chr25:11044193-11044525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
169, 212
               

               
Conread position:
               
494-925
               

               
Cow position:
               
chr25:14225252-14224799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 416
               

               
Conread position:
               
494-940
               

               
Cow position:
               
chr25:9641895-9642376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 10
               

               
Conread position:
               
494-1034
               

               
Cow position:
               
chr25:21024644-21024091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
200, 68
               

               
Conread position:
               
494-1068
               

               
Cow position:
               
chr25:20403169-20402562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 417
               

               
Conread position:
               
494-1127
               

               
Cow position:
               
chr25:21191039-21191685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 332
               

               
Conread position:
               
495-782
               

               
Cow position:
               
chr25:3140857-3141157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
495-793
               

               
Cow position:
               
chr25:5604688-5604387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
181, 213
               

               
Conread position:
               
495-1053
               

               
Cow position:
               
chr25:41107312-41107886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 148
               

               
Conread position:
               
496-1015
               

               
Cow position:
               
chr25:4897647-4898193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 426
               

               
Conread position:
               
497-1116
               

               
Cow position:
               
chr25:10643755-10643119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
498-655
               

               
Cow position:
               
chr25:32176809-32176648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
498-1116
               

               
Cow position:
               
chr25:7216376-7217014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 335
               

               
Conread position:
               
499-743
               

               
Cow position:
               
chr25:13122491-13122750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
499-776
               

               
Cow position:
               
chr25:38972387-38972677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
499-988
               

               
Cow position:
               
chr25:20020414-20019935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
500-667
               

               
Cow position:
               
chr25:16580009-16579838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
501-782
               

               
Cow position:
               
chr25:13067425-13067131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
501-782
               

               
Cow position:
               
chr25:27143375-27143080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
141, 216
               

               
Conread position:
               
503-701
               

               
Cow position:
               
chr25:16841111-16840911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
160, 97
               

               
Conread position:
               
504-777
               

               
Cow position:
               
chr25:11050949-11051220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
504-782
               

               
Cow position:
               
chr25:33589844-33589552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
504-947
               

               
Cow position:
               
chr25:15319490-15319947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 84
               

               
Conread position:
               
505-780
               

               
Cow position:
               
chr25:26618014-26618300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
505-826
               

               
Cow position:
               
chr25:5271150-5271495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
505-1064
               

               
Cow position:
               
chr25:41387947-41387384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 67
               

               
Conread position:
               
506-777
               

               
Cow position:
               
chr25:18271825-18272108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
507-782
               

               
Cow position:
               
chr25:18090485-18090773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
507-803
               

               
Cow position:
               
chr25:38570031-38569719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 245
               

               
Conread position:
               
507-884
               

               
Cow position:
               
chr25:1735753-1735351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 328
               

               
Conread position:
               
507-948
               

               
Cow position:
               
chr25:23389709-23389253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 165
               

               
Conread position:
               
507-985
               

               
Cow position:
               
chr25:20650830-20651341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
508-1138
               

               
Cow position:
               
chr25:33664332-33663692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
509-677
               

               
Cow position:
               
chr25:7328918-7329084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
509-777
               

               
Cow position:
               
chr25:11294359-11294641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
509-782
               

               
Cow position:
               
chr25:9414693-9414979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
509-1015
               

               
Cow position:
               
chr25:12171030-12171553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
509-1086
               

               
Cow position:
               
chr25:787838-788424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 99
               

               
Conread position:
               
510-1061
               

               
Cow position:
               
chr25:11830329-11829775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
510-1127
               

               
Cow position:
               
chr25:7641881-7641247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 31
               

               
Conread position:
               
511-663
               

               
Cow position:
               
chr25:22297600-22297443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
512-663
               

               
Cow position:
               
chr25:15255023-15254876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
512-782
               

               
Cow position:
               
chr25:3688983-3689266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
513-778
               

               
Cow position:
               
chr25:12208060-12208338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
513-788
               

               
Cow position:
               
chr25:26187962-26187674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
513-910
               

               
Cow position:
               
chr25:23945944-23945530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
513-1112
               

               
Cow position:
               
chr25:13446348-13445723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
150, 72
               

               
Conread position:
               
514-834
               

               
Cow position:
               
chr25:19570826-19570506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
157, 192
               

               
Conread position:
               
515-782
               

               
Cow position:
               
chr25:8235669-8235389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
515-782
               

               
Cow position:
               
chr25:17426829-17427109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
515-946
               

               
Cow position:
               
chr25:7800707-7801167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 322
               

               
Conread position:
               
515-984
               

               
Cow position:
               
chr25:26849477-26848978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
516-680
               

               
Cow position:
               
chr25:12521819-12521656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
516-687
               

               
Cow position:
               
chr25:26057915-26058088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
516-782
               

               
Cow position:
               
chr25:21121157-21121436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
516-785
               

               
Cow position:
               
chr25:17119613-17119333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
517-1099
               

               
Cow position:
               
chr25:16866810-16867425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
518-782
               

               
Cow position:
               
chr25:17585359-17585082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
519-875
               

               
Cow position:
               
chr25:24727210-24726825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 100
               

               
Conread position:
               
520-754
               

               
Cow position:
               
chr25:17191554-17191310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
520-810
               

               
Cow position:
               
chr25:13720964-13720653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 232
               

               
Conread position:
               
520-1127
               

               
Cow position:
               
chr25:29559595-29560215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
521-661
               

               
Cow position:
               
chr25:449123-448983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
521-769
               

               
Cow position:
               
chr25:31064751-31064997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
167, 70
               

               
Conread position:
               
521-851
               

               
Cow position:
               
chr25:21209372-21209017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 308
               

               
Conread position:
               
521-933
               

               
Cow position:
               
chr25:5514587-5515026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
521-1125
               

               
Cow position:
               
chr25:30852351-30852971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 211
               

               
Conread position:
               
522-693
               

               
Cow position:
               
chr25:23913148-23912977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
522-823
               

               
Cow position:
               
chr25:37254526-37254819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 174
               

               
Conread position:
               
522-925
               

               
Cow position:
               
chr25:6021548-6021972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
141, 385
               

               
Conread position:
               
522-1033
               

               
Cow position:
               
chr25:18564070-18564599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 373
               

               
Conread position:
               
523-680
               

               
Cow position:
               
chr25:20007695-20007857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
523-1148
               

               
Cow position:
               
chr25:2414412-2415032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 245
               

               
Conread position:
               
524-671
               

               
Cow position:
               
chr25:7011812-7011665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
524-752
               

               
Cow position:
               
chr25:20790113-20789883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
139, 115
               

               
Conread position:
               
526-1106
               

               
Cow position:
               
chr25:6470632-6470019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
527-677
               

               
Cow position:
               
chr25:10366356-10366203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
527-780
               

               
Cow position:
               
chr25:35602015-35602281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
527-782
               

               
Cow position:
               
chr25:16067846-16068112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
135, 51
               

               
Conread position:
               
527-786
               

               
Cow position:
               
chr25:18240736-18241009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
528-782
               

               
Cow position:
               
chr25:26319330-26319597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
529-899
               

               
Cow position:
               
chr25:1096163-1096548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
134, 29
               

               
Conread position:
               
529-899
               

               
Cow position:
               
chr25:32191251-32191648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
529-1113
               

               
Cow position:
               
chr25:20069312-20069907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 72
               

               
Conread position:
               
529-1138
               

               
Cow position:
               
chr25:30319863-30319229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 14
               

               
Conread position:
               
531-692
               

               
Cow position:
               
chr25:1762467-1762628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
532-782
               

               
Cow position:
               
chr25:7608906-7609169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
532-793
               

               
Cow position:
               
chr25:7259135-7259410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 266
               

               
Conread position:
               
533-792
               

               
Cow position:
               
chr25:29198918-29199188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 261
               

               
Conread position:
               
534-1112
               

               
Cow position:
               
chr25:36081488-36082061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 34
               

               
Conread position:
               
534-1138
               

               
Cow position:
               
chr25:13325192-13325784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 151
               

               
Conread position:
               
540-1127
               

               
Cow position:
               
chr25:26225441-26224828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
543-782
               

               
Cow position:
               
chr25:3167579-3167328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
545-1015
               

               
Cow position:
               
chr25:14274042-14274524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 311
               

               
Conread position:
               
546-782
               

               
Cow position:
               
chr25:19912940-19912691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
547-775
               

               
Cow position:
               
chr25:12174884-12174663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
167, 95
               

               
Conread position:
               
547-1116
               

               
Cow position:
               
chr25:21193340-21192744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 280
               

               
Conread position:
               
547-1124
               

               
Cow position:
               
chr25:6464425-6463823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 94
               

               
Conread position:
               
548-680
               

               
Cow position:
               
chr25:38402838-38402975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
548-693
               

               
Cow position:
               
chr25:19069885-19070021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
548-693
               

               
Cow position:
               
chr25:23325399-23325251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
548-1033
               

               
Cow position:
               
chr25:20460746-20461215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
548-1125
               

               
Cow position:
               
chr25:26087119-26087724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
549-787
               

               
Cow position:
               
chr25:33687293-33687039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
549-933
               

               
Cow position:
               
chr25:36124305-36124697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
549-1009
               

               
Cow position:
               
chr25:23350993-23351486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 215
               

               
Conread position:
               
551-690
               

               
Cow position:
               
chr25:22712042-22712184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
551-782
               

               
Cow position:
               
chr25:11097315-11097559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
551-782
               

               
Cow position:
               
chr25:12157490-12157734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
113, 158
               

               
Conread position:
               
551-782
               

               
Cow position:
               
chr25:29383720-29383476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
551-824
               

               
Cow position:
               
chr25:12359814-12360110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
551-860
               

               
Cow position:
               
chr25:27621694-27622027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
551-881
               

               
Cow position:
               
chr25:31733125-31732771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 82
               

               
Conread position:
               
552-785
               

               
Cow position:
               
chr25:16409124-16408878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
552-792
               

               
Cow position:
               
chr25:12176590-12176336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
552-818
               

               
Cow position:
               
chr25:13553521-13553801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
113, 263
               

               
Conread position:
               
554-679
               

               
Cow position:
               
chr25:18012969-18013096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
554-692
               

               
Cow position:
               
chr25:26881828-26881967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
554-910
               

               
Cow position:
               
chr25:12235143-12234772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
554-1014
               

               
Cow position:
               
chr25:13840506-13840016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
555-692
               

               
Cow position:
               
chr25:7479192-7479334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
555-760
               

               
Cow position:
               
chr25:26938645-26938423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 185
               

               
Conread position:
               
555-787
               

               
Cow position:
               
chr25:5341261-5341507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
555-1023
               

               
Cow position:
               
chr25:4548111-4547615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
559-787
               

               
Cow position:
               
chr25:6421436-6421198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
103, 212
               

               
Conread position:
               
559-1096
               

               
Cow position:
               
chr25:16064515-16065059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
560-754
               

               
Cow position:
               
chr25:11315244-11315449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
560-782
               

               
Cow position:
               
chr25:32514227-32513991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
561-692
               

               
Cow position:
               
chr25:14284150-14284017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
106, 6
               

               
Conread position:
               
561-766
               

               
Cow position:
               
chr25:16688632-16688417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
561-820
               

               
Cow position:
               
chr25:36506642-36506375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
89, 59
               

               
Conread position:
               
561-831
               

               
Cow position:
               
chr25:16560973-16560685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
561-881
               

               
Cow position:
               
chr25:9634548-9634868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
561-1026
               

               
Cow position:
               
chr25:5756308-5756790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 299
               

               
Conread position:
               
562-782
               

               
Cow position:
               
chr25:5537030-5536797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
563-1079
               

               
Cow position:
               
chr25:36761735-36762262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 72
               

               
Conread position:
               
564-782
               

               
Cow position:
               
chr25:2511088-2510857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
567-651
               

               
Cow position:
               
chr25:447956-447872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
567-663
               

               
Cow position:
               
chr25:35048039-35047943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
567-779
               

               
Cow position:
               
chr25:13412052-13412276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
568-782
               

               
Cow position:
               
chr25:18044876-18044649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
568-820
               

               
Cow position:
               
chr25:28327469-28327198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
569-967
               

               
Cow position:
               
chr25:12239510-12239097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
104, 8
               

               
Conread position:
               
571-782
               

               
Cow position:
               
chr25:23334639-23334863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
573-690
               

               
Cow position:
               
chr25:31230824-31230707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
573-885
               

               
Cow position:
               
chr25:40957357-40957021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 249
               

               
Conread position:
               
576-1105
               

               
Cow position:
               
chr25:6683428-6682864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
576-1116
               

               
Cow position:
               
chr25:12750531-12749954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 305
               

               
Conread position:
               
577-692
               

               
Cow position:
               
chr25:7032603-7032721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
578-761
               

               
Cow position:
               
chr25:2453959-2453764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
578-777
               

               
Cow position:
               
chr25:26407834-26408042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
578-782
               

               
Cow position:
               
chr25:19531019-19531236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
578-831
               

               
Cow position:
               
chr25:11269564-11269292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
578-941
               

               
Cow position:
               
chr25:10137740-10138114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
580-682
               

               
Cow position:
               
chr25:21266047-21266151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
583-819
               

               
Cow position:
               
chr25:30816465-30816727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
585-780
               

               
Cow position:
               
chr25:17037097-17037305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
585-794
               

               
Cow position:
               
chr25:18155237-18155458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 209
               

               
Conread position:
               
585-1057
               

               
Cow position:
               
chr25:9055846-9056316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 107
               

               
Conread position:
               
585-1111
               

               
Cow position:
               
chr25:5847154-5846614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 80
               

               
Conread position:
               
588-782
               

               
Cow position:
               
chr25:38910180-38910387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
588-821
               

               
Cow position:
               
chr25:9842649-9842900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
104, 85
               

               
Conread position:
               
588-830
               

               
Cow position:
               
chr25:36119846-36120106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
588-834
               

               
Cow position:
               
chr25:14103941-14104194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
107, 158
               

               
Conread position:
               
588-1015
               

               
Cow position:
               
chr25:10698798-10699246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 325
               

               
Conread position:
               
589-1015
               

               
Cow position:
               
chr25:6967126-6966677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 237
               

               
Conread position:
               
590-729
               

               
Cow position:
               
chr25:10013739-10013589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
590-806
               

               
Cow position:
               
chr25:7440520-7440733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
597-693
               

               
Cow position:
               
chr25:16044931-16044832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
597-777
               

               
Cow position:
               
chr25:20434208-20434398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
597-782
               

               
Cow position:
               
chr25:18236720-18236522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
597-782
               

               
Cow position:
               
chr25:35655215-35655410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 112
               

               
Conread position:
               
597-1045
               

               
Cow position:
               
chr25:38981760-38982220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
68, 223
               

               
Conread position:
               
600-767
               

               
Cow position:
               
chr25:8485876-8485701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
600-881
               

               
Cow position:
               
chr25:7445810-7446113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
600-1128
               

               
Cow position:
               
chr25:15273346-15273876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 221
               

               
Conread position:
               
602-1149
               

               
Cow position:
               
chr25:21245948-21245364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 309
               

               
Conread position:
               
603-827
               

               
Cow position:
               
chr25:18293430-18293652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
603-830
               

               
Cow position:
               
chr25:17354038-17354282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
603-1104
               

               
Cow position:
               
chr25:6948396-6947866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 307
               

               
Conread position:
               
605-773
               

               
Cow position:
               
chr25:20625268-20625091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
605-782
               

               
Cow position:
               
chr25:13062518-13062708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
606-782
               

               
Cow position:
               
chr25:23738792-23738603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
606-1132
               

               
Cow position:
               
chr25:26523641-26524174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
609-940
               

               
Cow position:
               
chr25:9957369-9957018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 297
               

               
Conread position:
               
609-1022
               

               
Cow position:
               
chr25:36037125-36036677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 225
               

               
Conread position:
               
611-1116
               

               
Cow position:
               
chr25:6803231-6803745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 145
               

               
Conread position:
               
616-919
               

               
Cow position:
               
chr25:15694655-15694980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 207
               

               
Conread position:
               
617-933
               

               
Cow position:
               
chr25:9961493-9961161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
618-1002
               

               
Cow position:
               
chr25:6886294-6885889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
620-893
               

               
Cow position:
               
chr25:6424905-6424613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
621-1026
               

               
Cow position:
               
chr25:17975690-17975272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 203
               

               
Conread position:
               
623-881
               

               
Cow position:
               
chr25:16400551-16400300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
626-944
               

               
Cow position:
               
chr25:9023327-9023655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
626-1126
               

               
Cow position:
               
chr25:12097525-12098044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 167
               

               
Conread position:
               
628-1048
               

               
Cow position:
               
chr25:13708701-13709142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 137
               

               
Conread position:
               
628-1127
               

               
Cow position:
               
chr25:23053241-23053771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
629-1034
               

               
Cow position:
               
chr25:25051699-25051263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 197
               

               
Conread position:
               
632-1004
               

               
Cow position:
               
chr25:12817061-12817449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 212
               

               
Conread position:
               
634-847
               

               
Cow position:
               
chr25:27521294-27521076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
637-1086
               

               
Cow position:
               
chr25:15714574-15715039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 160
               

               
Conread position:
               
642-1113
               

               
Cow position:
               
chr25:16319428-16318956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
644-839
               

               
Cow position:
               
chr25:25948695-25948483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
649-1116
               

               
Cow position:
               
chr25:19129571-19130051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
649-1143
               

               
Cow position:
               
chr25:6474395-6473856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 191
               

               
Conread position:
               
650-1034
               

               
Cow position:
               
chr25:14117815-14118200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
654-1141
               

               
Cow position:
               
chr25:22203977-22203473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 225
               

               
Conread position:
               
662-901
               

               
Cow position:
               
chr25:8347230-8347490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
34, 237
               

               
Conread position:
               
662-1116
               

               
Cow position:
               
chr25:26700762-26701217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
662-1141
               

               
Cow position:
               
chr25:20348579-20349091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 484
               

               
Conread position:
               
665-884
               

               
Cow position:
               
chr25:10366028-10365787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
665-1123
               

               
Cow position:
               
chr25:10657294-10656834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
665-1124
               

               
Cow position:
               
chr25:12261170-12260681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
666-1112
               

               
Cow position:
               
chr25:9269103-9269533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
670-1112
               

               
Cow position:
               
chr25:14512845-14513299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
671-1068
               

               
Cow position:
               
chr25:8225837-8226250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
671-1110
               

               
Cow position:
               
chr25:36535702-36535226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
672-790
               

               
Cow position:
               
chr25:8961194-8961324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
672-925
               

               
Cow position:
               
chr25:35332902-35333163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
674-860
               

               
Cow position:
               
chr25:10746636-10746836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
674-932
               

               
Cow position:
               
chr25:35625438-35625173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
674-1032
               

               
Cow position:
               
chr25:21895150-21894773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
678-1104
               

               
Cow position:
               
chr25:17566324-17566776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 220
               

               
Conread position:
               
678-1127
               

               
Cow position:
               
chr25:38957715-38958153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
685-1127
               

               
Cow position:
               
chr25:1762858-1763292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
686-1140
               

               
Cow position:
               
chr25:448410-447942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 209
               

               
Conread position:
               
687-1116
               

               
Cow position:
               
chr25:19478440-19478887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
693-1051
               

               
Cow position:
               
chr25:61416-61785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
22, 206
               

               
Conread position:
               
695-984
               

               
Cow position:
               
chr25:12081547-12081258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
696-813
               

               
Cow position:
               
chr25:10156353-10156478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
696-860
               

               
Cow position:
               
chr25:17712296-17712475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
696-899
               

               
Cow position:
               
chr25:24452407-24452198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
696-926
               

               
Cow position:
               
chr25:7329306-7329554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
696-928
               

               
Cow position:
               
chr25:8918516-8918269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
696-930
               

               
Cow position:
               
chr25:35344800-35345040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
696-935
               

               
Cow position:
               
chr25:16001758-16001511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
696-988
               

               
Cow position:
               
chr25:38425127-38425429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
696-1014
               

               
Cow position:
               
chr25:37594176-37594501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
696-1015
               

               
Cow position:
               
chr25:15377095-15377421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
696-1039
               

               
Cow position:
               
chr25:21266768-21267106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
696-1050
               

               
Cow position:
               
chr25:31230461-31230118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
696-1054
               

               
Cow position:
               
chr25:15254569-15254214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
696-1055
               

               
Cow position:
               
chr25:22297255-22296898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
696-1086
               

               
Cow position:
               
chr25:22369155-22369553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 209
               

               
Conread position:
               
696-1116
               

               
Cow position:
               
chr25:7306060-7306487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
696-1116
               

               
Cow position:
               
chr25:38135510-38135950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
696-1125
               

               
Cow position:
               
chr25:35612539-35612094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
18, 116
               

               
Conread position:
               
697-880
               

               
Cow position:
               
chr25:36026770-36026970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
697-1049
               

               
Cow position:
               
chr25:28188186-28187816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 204
               

               
Conread position:
               
697-1052
               

               
Cow position:
               
chr25:7581665-7581296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
697-1054
               

               
Cow position:
               
chr25:14196619-14196995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
697-1061
               

               
Cow position:
               
chr25:33978438-33978081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
697-1065
               

               
Cow position:
               
chr25:18988139-18988522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 242
               

               
Conread position:
               
697-1111
               

               
Cow position:
               
chr25:9990327-9989910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
697-1111
               

               
Cow position:
               
chr25:33550269-33550703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
697-1116
               

               
Cow position:
               
chr25:12293988-12293543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
17, 159
               

               
Conread position:
               
697-1123
               

               
Cow position:
               
chr25:21289103-21289553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 200
               

               
Conread position:
               
697-1128
               

               
Cow position:
               
chr25:13380853-13380389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 208
               

               
Conread position:
               
697-1128
               

               
Cow position:
               
chr25:19679105-19679561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
697-1137
               

               
Cow position:
               
chr25:18487437-18487891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
697-1143
               

               
Cow position:
               
chr25:7011186-7010746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
697-1156
               

               
Cow position:
               
chr25:24669668-24669214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
698-880
               

               
Cow position:
               
chr25:13642552-13642350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
698-887
               

               
Cow position:
               
chr25:2194709-2194911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 119
               

               
Conread position:
               
698-946
               

               
Cow position:
               
chr25:14266740-14266492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
698-1035
               

               
Cow position:
               
chr25:12840954-12840603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
699-839
               

               
Cow position:
               
chr25:16316662-16316809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
699-1111
               

               
Cow position:
               
chr25:20007912-20008326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
700-830
               

               
Cow position:
               
chr25:433314-433168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
702-1116
               

               
Cow position:
               
chr25:29826178-29826616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 205
               

               
Conread position:
               
703-1112
               

               
Cow position:
               
chr25:20785815-20785394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 105
               

               
Conread position:
               
704-899
               

               
Cow position:
               
chr25:36033206-36033417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
704-1047
               

               
Cow position:
               
chr25:10218281-10217922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 191
               

               
Conread position:
               
706-1054
               

               
Cow position:
               
chr25:34169726-34170080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
711-1126
               

               
Cow position:
               
chr25:40905054-40904618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 146
               

               
Conread position:
               
713-1127
               

               
Cow position:
               
chr25:7007696-7008126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
713-1128
               

               
Cow position:
               
chr25:17914560-17914993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 194
               

               
Conread position:
               
716-1127
               

               
Cow position:
               
chr25:26090029-26089618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
718-1054
               

               
Cow position:
               
chr25:12319553-12319219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
719-1128
               

               
Cow position:
               
chr25:34768934-34768537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
725-946
               

               
Cow position:
               
chr25:26270142-26269911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
727-984
               

               
Cow position:
               
chr25:16714480-16714205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 179
               

               
Conread position:
               
727-1112
               

               
Cow position:
               
chr25:13272363-13272762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
727-1141
               

               
Cow position:
               
chr25:22178715-22179130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
729-1066
               

               
Cow position:
               
chr25:6977774-6978126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 164
               

               
Conread position:
               
729-1126
               

               
Cow position:
               
chr25:17704545-17704945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 133
               

               
Conread position:
               
731-941
               

               
Cow position:
               
chr25:14945644-14945430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
732-1120
               

               
Cow position:
               
chr25:27801089-27801479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
735-1098
               

               
Cow position:
               
chr25:17342251-17342640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 175
               

               
Conread position:
               
739-1068
               

               
Cow position:
               
chr25:25861554-25861199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 155
               

               
Conread position:
               
740-1125
               

               
Cow position:
               
chr25:14720559-14720938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
747-1104
               

               
Cow position:
               
chr25:13443586-13443222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 90
               

               
Conread position:
               
749-1125
               

               
Cow position:
               
chr25:19849685-19850071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
754-1116
               

               
Cow position:
               
chr25:26133868-26134243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
755-1113
               

               
Cow position:
               
chr25:21893163-21893528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
763-1116
               

               
Cow position:
               
chr25:12510173-12509824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
765-1126
               

               
Cow position:
               
chr25:18905721-18906094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
768-1102
               

               
Cow position:
               
chr25:23245166-23244821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
768-1128
               

               
Cow position:
               
chr25:17991738-17991386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
770-1130
               

               
Cow position:
               
chr25:36835576-36835223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
776-1053
               

               
Cow position:
               
chr25:22751157-22750871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
777-1047
               

               
Cow position:
               
chr25:5474373-5474103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
777-1125
               

               
Cow position:
               
chr25:9002528-9002875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
778-1112
               

               
Cow position:
               
chr25:22730687-22731018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
779-1061
               

               
Cow position:
               
chr25:38421535-38421807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
779-1109
               

               
Cow position:
               
chr25:7380985-7380648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
779-1113
               

               
Cow position:
               
chr25:26679083-26679421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
782-1113
               

               
Cow position:
               
chr25:24651593-24651263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
782-1135
               

               
Cow position:
               
chr25:30618924-30619285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
783-1128
               

               
Cow position:
               
chr25:33686820-33686472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
783-1135
               

               
Cow position:
               
chr25:24207559-24207194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
784-1116
               

               
Cow position:
               
chr25:20523370-20523041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
789-1092
               

               
Cow position:
               
chr25:15634611-15634293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
789-1120
               

               
Cow position:
               
chr25:22756474-22756812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
790-1123
               

               
Cow position:
               
chr25:7816850-7817189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
795-1148
               

               
Cow position:
               
chr25:22346644-22347014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
796-1119
               

               
Cow position:
               
chr25:17119613-17119944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
796-1123
               

               
Cow position:
               
chr25:18202054-18201725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
796-1126
               

               
Cow position:
               
chr25:12305153-12305486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
797-1116
               

               
Cow position:
               
chr25:4488793-4489100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
798-1116
               

               
Cow position:
               
chr25:33457604-33457922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
805-1110
               

               
Cow position:
               
chr25:19364181-19363869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
812-1112
               

               
Cow position:
               
chr25:36555802-36555506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
812-1128
               

               
Cow position:
               
chr25:1824208-1823882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
813-1116
               

               
Cow position:
               
chr25:30816774-30817089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
815-1102
               

               
Cow position:
               
chr25:36872252-36872546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
815-1116
               

               
Cow position:
               
chr25:9843066-9843378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
817-1067
               

               
Cow position:
               
chr25:17474619-17474366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
832-1112
               

               
Cow position:
               
chr25:7799463-7799745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
841-1127
               

               
Cow position:
               
chr25:7726590-7726873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
842-1137
               

               
Cow position:
               
chr25:26578691-26578383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
852-1106
               

               
Cow position:
               
chr25:8898365-8898622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
858-1154
               

               
Cow position:
               
chr25:8346063-8345768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
859-1120
               

               
Cow position:
               
chr25:35052681-35052417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
859-1126
               

               
Cow position:
               
chr25:433109-432842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
861-1110
               

               
Cow position:
               
chr25:1840263-1840512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 191
               

               
Conread position:
               
862-1106
               

               
Cow position:
               
chr25:21501109-21500855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
27, 202
               

               
Conread position:
               
864-1116
               

               
Cow position:
               
chr25:35762535-35762785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
866-1110
               

               
Cow position:
               
chr25:26306259-26306012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
877-1116
               

               
Cow position:
               
chr25:22348508-22348261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
886-1119
               

               
Cow position:
               
chr25:35384370-35384136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
886-1151
               

               
Cow position:
               
chr25:28930728-28930453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
887-1110
               

               
Cow position:
               
chr25:13222865-13223088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
887-1137
               

               
Cow position:
               
chr25:28597647-28597388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
888-1112
               

               
Cow position:
               
chr25:17918941-17919170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
890-1119
               

               
Cow position:
               
chr25:18760740-18760511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
891-1124
               

               
Cow position:
               
chr25:12657342-12657101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
893-1155
               

               
Cow position:
               
chr25:28423114-28423387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
905-1120
               

               
Cow position:
               
chr25:14225346-14225567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 210
               

               
Conread position:
               
907-1056
               

               
Cow position:
               
chr25:15294782-15294932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
909-1124
               

               
Cow position:
               
chr25:36873068-36872850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
910-1113
               

               
Cow position:
               
chr25:31514170-31514378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
910-1128
               

               
Cow position:
               
chr25:5807934-5808157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
911-1054
               

               
Cow position:
               
chr25:12064038-12064181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
912-1124
               

               
Cow position:
               
chr25:23520037-23519832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
166, 24
               

               
Conread position:
               
912-1124
               

               
Cow position:
               
chr25:33311336-33311118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
918-1127
               

               
Cow position:
               
chr25:28945017-28945224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
922-1124
               

               
Cow position:
               
chr25:14164200-14164403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
923-1129
               

               
Cow position:
               
chr25:20085582-20085791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 23
               

               
Conread position:
               
924-1141
               

               
Cow position:
               
chr25:18551331-18551113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
925-1116
               

               
Cow position:
               
chr25:17724220-17724023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
934-1106
               

               
Cow position:
               
chr25:26061713-26061537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
935-1125
               

               
Cow position:
               
chr25:31657260-31657075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 6
               

               
Conread position:
               
936-1126
               

               
Cow position:
               
chr25:7673317-7673513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
105, 184
               

               
Conread position:
               
936-1135
               

               
Cow position:
               
chr25:5791701-5791498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 177
               

               
Conread position:
               
936-1141
               

               
Cow position:
               
chr25:22565942-22565741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
954-1138
               

               
Cow position:
               
chr25:27520920-27520731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
956-1102
               

               
Cow position:
               
chr25:7005548-7005698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
956-1113
               

               
Cow position:
               
chr25:6061396-6061555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
956-1116
               

               
Cow position:
               
chr25:14457185-14457349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
958-1151
               

               
Cow position:
               
chr25:22154062-22154264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
959-1100
               

               
Cow position:
               
chr25:11855510-11855366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 10
               

               
Conread position:
               
959-1102
               

               
Cow position:
               
chr25:7622858-7623005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
959-1116
               

               
Cow position:
               
chr25:24115277-24115118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
111, 79
               

               
Conread position:
               
959-1116
               

               
Cow position:
               
chr25:26989236-26989397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 154
               

               
Conread position:
               
959-1127
               

               
Cow position:
               
chr25:4157207-4157039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
959-1128
               

               
Cow position:
               
chr25:26269678-26269505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
959-1135
               

               
Cow position:
               
chr25:7403302-7403120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
959-1135
               

               
Cow position:
               
chr25:14210022-14210195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
155, 79
               

               
Conread position:
               
959-1136
               

               
Cow position:
               
chr25:8410995-8410820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
959-1136
               

               
Cow position:
               
chr25:18491077-18491253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 111
               

               
Conread position:
               
959-1137
               

               
Cow position:
               
chr25:36369858-36370041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
959-1137
               

               
Cow position:
               
chr25:36375549-36375732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
959-1141
               

               
Cow position:
               
chr25:21547196-21547380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
959-1151
               

               
Cow position:
               
chr25:7311357-7311159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 149
               

               
Conread position:
               
961-1116
               

               
Cow position:
               
chr25:33272674-33272835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
961-1119
               

               
Cow position:
               
chr25:20487397-20487235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
961-1127
               

               
Cow position:
               
chr25:33100616-33100779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
107, 81
               

               
Conread position:
               
961-1143
               

               
Cow position:
               
chr25:22373449-22373259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
962-1090
               

               
Cow position:
               
chr25:18568175-18568043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
966-1137
               

               
Cow position:
               
chr25:7185230-7185055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
972-1129
               

               
Cow position:
               
chr25:22119605-22119444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 97
               
Show alignments to all cow chromosomes.