Cow genome map

Conread name: Ss1.1-Pig4-TMW8049N19.3

Conread position: 120-777
Cow position: chr6:10681959-10682635 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 0

Conread position: 276-808
Cow position: chr6:2074018-2074571 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 304-520
Cow position: chr6:65847824-65847604 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 189

Conread position: 304-534
Cow position: chr6:54429236-54429450 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 60

Conread position: 304-694
Cow position: chr6:479095-479491 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 304-780
Cow position: chr6:20451507-20451994 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 124

Conread position: 304-780
Cow position: chr6:24242835-24243320 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 119

Conread position: 305-780
Cow position: chr6:40358328-40357836 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 305-792
Cow position: chr6:47039661-47039181 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 265

Conread position: 305-792
Cow position: chr6:51877305-51877811 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 52

Conread position: 305-841
Cow position: chr6:42267267-42267820 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 306-518
Cow position: chr6:11721662-11721450 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 311-437
Cow position: chr6:6100594-6100466 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 311-777
Cow position: chr6:40300454-40299971 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 324
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 26

Conread position: 313-443
Cow position: chr6:40861449-40861577 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 313-642
Cow position: chr6:11188020-11188352 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 213
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 137, 60

Conread position: 319-692
Cow position: chr6:89680-89312 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 12

Conread position: 320-743
Cow position: chr6:33949598-33949144 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 131

Conread position: 321-579
Cow position: chr6:39916388-39916652 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 23, 155

Conread position: 321-663
Cow position: chr6:53380687-53381030 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 226, 150

Conread position: 322-884
Cow position: chr6:16675235-16675808 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 354

Conread position: 324-538
Cow position: chr6:1498732-1498946 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 324-613
Cow position: chr6:63032497-63032772 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 89, 0

Conread position: 324-712
Cow position: chr6:41868402-41868000 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 259
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 31

Conread position: 325-782
Cow position: chr6:2898334-2898805 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 228

Conread position: 326-470
Cow position: chr6:14415832-14415976 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 327-459
Cow position: chr6:54427065-54426932 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 8

Conread position: 328-777
Cow position: chr6:3445238-3444787 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 179

Conread position: 329-488
Cow position: chr6:57283703-57283545 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 329-662
Cow position: chr6:50685395-50685061 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 200, 49

Conread position: 329-680
Cow position: chr6:67950358-67950708 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 186

Conread position: 329-683
Cow position: chr6:65866853-65866494 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 241

Conread position: 329-748
Cow position: chr6:64888530-64888946 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 279
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 239, 105

Conread position: 329-780
Cow position: chr6:16593525-16593968 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 104

Conread position: 329-780
Cow position: chr6:40975742-40976204 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 124

Conread position: 329-792
Cow position: chr6:54218098-54218575 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 49

Conread position: 329-885
Cow position: chr6:10695291-10695875 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 79

Conread position: 330-540
Cow position: chr6:3113494-3113276 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 208

Conread position: 330-785
Cow position: chr6:66234917-66235372 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 164

Conread position: 331-515
Cow position: chr6:33301248-33301431 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 127, 0

Conread position: 331-526
Cow position: chr6:6061360-6061162 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 129

Conread position: 331-613
Cow position: chr6:30470790-30470509 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 204, 50

Conread position: 331-832
Cow position: chr6:28343081-28343597 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 50

Conread position: 332-515
Cow position: chr6:8538514-8538696 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 48

Conread position: 332-787
Cow position: chr6:36531855-36532323 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 230

Conread position: 333-468
Cow position: chr6:8535218-8535083 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 333-471
Cow position: chr6:34843110-34842965 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 333-477
Cow position: chr6:6944396-6944253 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 333-488
Cow position: chr6:7112133-7111979 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 333-506
Cow position: chr6:4274626-4274794 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 333-514
Cow position: chr6:44494787-44494968 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 83

Conread position: 333-515
Cow position: chr6:58036864-58037042 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 333-517
Cow position: chr6:41410182-41410366 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 333-519
Cow position: chr6:40861774-40861592 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 61, 0

Conread position: 333-521
Cow position: chr6:14199624-14199811 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 139, 41

Conread position: 333-523
Cow position: chr6:14851177-14850990 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 333-523
Cow position: chr6:16220605-16220416 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 185, 0

Conread position: 333-524
Cow position: chr6:5946194-5946003 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 333-527
Cow position: chr6:40319841-40320035 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 50, 79

Conread position: 333-528
Cow position: chr6:24109126-24109321 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 333-539
Cow position: chr6:40137824-40137618 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 333-540
Cow position: chr6:37488075-37487878 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 141

Conread position: 333-540
Cow position: chr6:56858840-56859033 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 333-541
Cow position: chr6:1263740-1263947 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 161, 0

Conread position: 333-558
Cow position: chr6:1104580-1104364 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 149, 0

Conread position: 333-570
Cow position: chr6:22332914-22332678 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 333-575
Cow position: chr6:28482246-28482489 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 177

Conread position: 333-585
Cow position: chr6:6200910-6201161 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 333-590
Cow position: chr6:34503943-34503687 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 333-603
Cow position: chr6:8432471-8432740 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 156

Conread position: 333-607
Cow position: chr6:45160953-45160680 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 333-618
Cow position: chr6:6614882-6615167 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 56

Conread position: 333-618
Cow position: chr6:51393235-51393521 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 232, 41

Conread position: 333-620
Cow position: chr6:28164105-28164397 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 227, 65

Conread position: 333-638
Cow position: chr6:2582195-2582502 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 46

Conread position: 333-639
Cow position: chr6:223918-223626 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 333-644
Cow position: chr6:13405916-13406231 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 165, 37

Conread position: 333-654
Cow position: chr6:45793237-45793560 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 60

Conread position: 333-655
Cow position: chr6:28080504-28080187 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 81

Conread position: 333-661
Cow position: chr6:29239139-29239467 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 196

Conread position: 333-661
Cow position: chr6:62486916-62486587 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 52

Conread position: 333-663
Cow position: chr6:7175691-7175357 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 51

Conread position: 333-663
Cow position: chr6:28101104-28100755 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 60

Conread position: 333-663
Cow position: chr6:32420521-32420850 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 333-663
Cow position: chr6:34476175-34475847 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 333-663
Cow position: chr6:41466711-41466386 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 212

Conread position: 333-663
Cow position: chr6:50983613-50983944 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 333-671
Cow position: chr6:52401223-52401562 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 138

Conread position: 333-672
Cow position: chr6:3118808-3118465 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 96

Conread position: 333-680
Cow position: chr6:1096155-1095797 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 333-680
Cow position: chr6:3375165-3374812 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 186

Conread position: 333-680
Cow position: chr6:29084809-29084464 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 215, 48

Conread position: 333-682
Cow position: chr6:12100001-12100370 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 268

Conread position: 333-682
Cow position: chr6:41413611-41413279 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 248, 50

Conread position: 333-682
Cow position: chr6:42617060-42617407 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 29

Conread position: 333-682
Cow position: chr6:51191208-51191570 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 154, 117

Conread position: 333-689
Cow position: chr6:25774043-25773688 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 171

Conread position: 333-689
Cow position: chr6:40497007-40497363 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 50

Conread position: 333-691
Cow position: chr6:39330952-39330590 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 333-692
Cow position: chr6:1834576-1834934 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 88

Conread position: 333-692
Cow position: chr6:3484839-3484463 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 333-693
Cow position: chr6:15471233-15470871 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 51, 149

Conread position: 333-693
Cow position: chr6:63094239-63094601 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 10

Conread position: 333-766
Cow position: chr6:61066509-61066961 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 333-771
Cow position: chr6:17111585-17111138 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 320

Conread position: 333-771
Cow position: chr6:17121970-17122417 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 320

Conread position: 333-771
Cow position: chr6:60876876-60877325 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 0

Conread position: 333-777
Cow position: chr6:1817433-1816978 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 102

Conread position: 333-777
Cow position: chr6:24125825-24125397 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 120

Conread position: 333-777
Cow position: chr6:57303171-57303626 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 303
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 237, 46

Conread position: 333-778
Cow position: chr6:64426620-64427077 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 48

Conread position: 333-780
Cow position: chr6:38872947-38872489 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 251

Conread position: 333-780
Cow position: chr6:51718137-51718596 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 52

Conread position: 333-780
Cow position: chr6:55538693-55538236 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 46

Conread position: 333-782
Cow position: chr6:76860-76399 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 161

Conread position: 333-782
Cow position: chr6:42481462-42481921 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 219

Conread position: 333-785
Cow position: chr6:46584713-46585181 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 466

Conread position: 333-785
Cow position: chr6:51733662-51734128 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 0

Conread position: 333-787
Cow position: chr6:47976-47512 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 101

Conread position: 333-787
Cow position: chr6:27526424-27525957 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 283

Conread position: 333-787
Cow position: chr6:37643998-37644465 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 189

Conread position: 333-787
Cow position: chr6:55903670-55904132 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 201

Conread position: 333-794
Cow position: chr6:33921820-33921347 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 64

Conread position: 333-794
Cow position: chr6:44017247-44016768 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 184

Conread position: 333-803
Cow position: chr6:38988243-38987754 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 59

Conread position: 333-809
Cow position: chr6:52001807-52002295 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 81

Conread position: 333-813
Cow position: chr6:56501744-56502236 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 155

Conread position: 333-819
Cow position: chr6:12387894-12387388 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 217

Conread position: 333-819
Cow position: chr6:31688955-31688449 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 427

Conread position: 333-819
Cow position: chr6:44510677-44511181 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 345
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 330, 41

Conread position: 333-822
Cow position: chr6:45617998-45617498 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 81

Conread position: 333-823
Cow position: chr6:25783737-25784252 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 93

Conread position: 333-824
Cow position: chr6:208584-209069 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 91

Conread position: 333-824
Cow position: chr6:29077161-29077670 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 61

Conread position: 333-830
Cow position: chr6:15137592-15137072 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 203

Conread position: 333-830
Cow position: chr6:65909906-65910421 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 428

Conread position: 333-854
Cow position: chr6:46666538-46667086 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 267

Conread position: 333-860
Cow position: chr6:50120352-50119806 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 84

Conread position: 333-872
Cow position: chr6:11638304-11637759 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 59

Conread position: 333-873
Cow position: chr6:65862118-65862684 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 47

Conread position: 333-881
Cow position: chr6:28156692-28156145 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 358

Conread position: 333-888
Cow position: chr6:21312325-21311740 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 178

Conread position: 333-909
Cow position: chr6:60931472-60930864 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 200

Conread position: 333-932
Cow position: chr6:16737454-16738072 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 69

Conread position: 333-942
Cow position: chr6:16410635-16411255 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 174

Conread position: 333-990
Cow position: chr6:58073468-58074160 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 502

Conread position: 333-1035
Cow position: chr6:9751617-9750900 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 61

Conread position: 333-1116
Cow position: chr6:10332677-10331859 (view UCSC Genome Browser custom track)
Alignm length: 832
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 602

Conread position: 333-1148
Cow position: chr6:15275659-15274810 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 60

Conread position: 333-1152
Cow position: chr6:8562158-8562986 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 81

Conread position: 333-1159
Cow position: chr6:48567911-48567082 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 108

Conread position: 334-534
Cow position: chr6:55593647-55593846 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 334-608
Cow position: chr6:33359231-33359506 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 156, 47

Conread position: 334-665
Cow position: chr6:5122923-5122589 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 34

Conread position: 334-693
Cow position: chr6:23074541-23074919 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 245
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 235

Conread position: 334-809
Cow position: chr6:6166837-6167324 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 45

Conread position: 334-1151
Cow position: chr6:53933414-53932571 (view UCSC Genome Browser custom track)
Alignm length: 853
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 14

Conread position: 335-655
Cow position: chr6:52081861-52081535 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 207
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 76

Conread position: 335-780
Cow position: chr6:40813944-40814404 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 0

Conread position: 336-488
Cow position: chr6:57119899-57120050 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 336-511
Cow position: chr6:53672926-53673100 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 164, 114

Conread position: 336-741
Cow position: chr6:27887504-27887907 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 73

Conread position: 336-777
Cow position: chr6:15962358-15961931 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 304
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 164, 44

Conread position: 336-792
Cow position: chr6:4389296-4389753 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 158

Conread position: 336-887
Cow position: chr6:14839586-14839016 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 66

Conread position: 337-506
Cow position: chr6:43797313-43797145 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 337-513
Cow position: chr6:55688215-55688392 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 337-540
Cow position: chr6:25178741-25178537 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 47, 86

Conread position: 337-543
Cow position: chr6:60419009-60419219 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 99

Conread position: 337-557
Cow position: chr6:6160167-6160379 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 36

Conread position: 337-685
Cow position: chr6:51970431-51970075 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 25, 17

Conread position: 337-874
Cow position: chr6:47025911-47026475 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 27

Conread position: 338-529
Cow position: chr6:6633406-6633216 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 26

Conread position: 338-558
Cow position: chr6:46813726-46813938 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 10

Conread position: 338-900
Cow position: chr6:58594677-58594086 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 55

Conread position: 339-540
Cow position: chr6:29085831-29086030 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 0

Conread position: 339-634
Cow position: chr6:42839364-42839656 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 175, 68

Conread position: 339-678
Cow position: chr6:15181714-15182052 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 223, 147

Conread position: 339-693
Cow position: chr6:38797726-38798091 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 53

Conread position: 339-789
Cow position: chr6:50625051-50625506 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 322
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 84, 44

Conread position: 339-884
Cow position: chr6:33852359-33851790 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 168

Conread position: 340-782
Cow position: chr6:40251214-40250762 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 14

Conread position: 341-524
Cow position: chr6:6119416-6119232 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 150
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 104, 0

Conread position: 341-569
Cow position: chr6:29689443-29689660 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 341-594
Cow position: chr6:37611572-37611820 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 219, 84

Conread position: 341-601
Cow position: chr6:22225412-22225150 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 58

Conread position: 341-688
Cow position: chr6:20094126-20093779 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 202, 25

Conread position: 342-440
Cow position: chr6:17334349-17334447 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 342-460
Cow position: chr6:32125538-32125656 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 342-468
Cow position: chr6:56849103-56849229 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 68

Conread position: 342-471
Cow position: chr6:1537552-1537683 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 342-476
Cow position: chr6:38995135-38995000 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 39, 108

Conread position: 342-479
Cow position: chr6:16191211-16191347 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 117
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 342-479
Cow position: chr6:64304756-64304618 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 342-496
Cow position: chr6:24759218-24759066 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 127
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 342-498
Cow position: chr6:25408095-25407940 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 342-505
Cow position: chr6:49692809-49692972 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 342-515
Cow position: chr6:10253361-10253535 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 342-515
Cow position: chr6:14707294-14707126 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 342-515
Cow position: chr6:59596845-59597018 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 342-515
Cow position: chr6:65874727-65874554 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 46

Conread position: 342-517
Cow position: chr6:24988630-24988806 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 342-531
Cow position: chr6:64314592-64314404 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 0

Conread position: 342-534
Cow position: chr6:47383175-47383367 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 342-537
Cow position: chr6:52248943-52248750 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 148, 100

Conread position: 342-539
Cow position: chr6:9839539-9839343 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 342-539
Cow position: chr6:41816061-41815874 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 342-541
Cow position: chr6:875904-875712 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 342-543
Cow position: chr6:10106580-10106379 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 342-548
Cow position: chr6:12927158-12927362 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 171, 0

Conread position: 342-549
Cow position: chr6:24631664-24631456 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 158, 0

Conread position: 342-579
Cow position: chr6:10176912-10176677 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 342-585
Cow position: chr6:50446464-50446224 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 342-598
Cow position: chr6:4022118-4022379 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 129, 37

Conread position: 342-607
Cow position: chr6:50637846-50638111 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 342-613
Cow position: chr6:36830622-36830905 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 342-621
Cow position: chr6:19059864-19060142 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 342-622
Cow position: chr6:26697469-26697195 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 77

Conread position: 342-631
Cow position: chr6:14148174-14148467 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 203, 152

Conread position: 342-635
Cow position: chr6:55170060-55170346 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 342-643
Cow position: chr6:53811158-53811455 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 31

Conread position: 342-646
Cow position: chr6:12406816-12407110 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 149, 39

Conread position: 342-658
Cow position: chr6:726548-726236 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 342-663
Cow position: chr6:17326837-17326519 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 209, 41

Conread position: 342-663
Cow position: chr6:28415263-28414940 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 81

Conread position: 342-663
Cow position: chr6:33984386-33984717 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 134, 47

Conread position: 342-663
Cow position: chr6:62921785-62921481 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 342-668
Cow position: chr6:50114288-50114612 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 68

Conread position: 342-671
Cow position: chr6:14950067-14949743 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 342-672
Cow position: chr6:44098272-44098607 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 142

Conread position: 342-676
Cow position: chr6:44869711-44869376 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 242, 31

Conread position: 342-677
Cow position: chr6:22017587-22017250 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 41

Conread position: 342-679
Cow position: chr6:7104645-7104307 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 21

Conread position: 342-679
Cow position: chr6:19044779-19045116 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 159

Conread position: 342-680
Cow position: chr6:4903206-4902871 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 77

Conread position: 342-680
Cow position: chr6:25223830-25223492 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 43

Conread position: 342-680
Cow position: chr6:47977521-47977859 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 152

Conread position: 342-680
Cow position: chr6:55143678-55143343 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 68

Conread position: 342-682
Cow position: chr6:529265-528921 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 137

Conread position: 342-687
Cow position: chr6:6459699-6460047 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 0

Conread position: 342-690
Cow position: chr6:1637367-1637015 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 0

Conread position: 342-690
Cow position: chr6:52697206-52697557 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 0

Conread position: 342-691
Cow position: chr6:539725-540071 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 233

Conread position: 342-691
Cow position: chr6:47171634-47171985 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 181

Conread position: 342-692
Cow position: chr6:11160595-11160225 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 290

Conread position: 342-692
Cow position: chr6:34494262-34494611 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 56

Conread position: 342-692
Cow position: chr6:54865753-54865408 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 342-693
Cow position: chr6:42131386-42131022 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 37

Conread position: 342-693
Cow position: chr6:49444706-49445062 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 102

Conread position: 342-693
Cow position: chr6:50973712-50973363 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 22

Conread position: 342-693
Cow position: chr6:66199234-66199580 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 50

Conread position: 342-697
Cow position: chr6:65930811-65931169 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 39

Conread position: 342-757
Cow position: chr6:42420708-42421127 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 218

Conread position: 342-763
Cow position: chr6:6471329-6470903 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 111

Conread position: 342-766
Cow position: chr6:37761831-37762264 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 295
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 189, 17

Conread position: 342-767
Cow position: chr6:39137081-39137510 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 184

Conread position: 342-775
Cow position: chr6:10266543-10266102 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 96

Conread position: 342-776
Cow position: chr6:35873145-35872702 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 239

Conread position: 342-779
Cow position: chr6:11442380-11441933 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 166

Conread position: 342-779
Cow position: chr6:27365756-27366209 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 407

Conread position: 342-779
Cow position: chr6:46391135-46391580 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 342-780
Cow position: chr6:706585-707035 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 53

Conread position: 342-780
Cow position: chr6:16418101-16417652 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 367

Conread position: 342-780
Cow position: chr6:20552651-20552213 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 66

Conread position: 342-780
Cow position: chr6:33466547-33466989 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 37

Conread position: 342-783
Cow position: chr6:17049964-17050412 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 51

Conread position: 342-787
Cow position: chr6:8753868-8753410 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 238

Conread position: 342-787
Cow position: chr6:25218370-25218827 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 152

Conread position: 342-790
Cow position: chr6:43345999-43345559 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 342-793
Cow position: chr6:25358517-25358974 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 80

Conread position: 342-797
Cow position: chr6:366656-367125 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 0

Conread position: 342-801
Cow position: chr6:21832072-21831604 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 418

Conread position: 342-813
Cow position: chr6:6721559-6722035 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 106

Conread position: 342-818
Cow position: chr6:13741138-13741631 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 313

Conread position: 342-818
Cow position: chr6:38595058-38594569 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 100

Conread position: 342-820
Cow position: chr6:828243-827770 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 78

Conread position: 342-822
Cow position: chr6:57473836-57474319 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 38

Conread position: 342-823
Cow position: chr6:45666347-45665845 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 38

Conread position: 342-824
Cow position: chr6:39091991-39092447 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 165

Conread position: 342-830
Cow position: chr6:48872762-48872261 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 37

Conread position: 342-830
Cow position: chr6:65844645-65845151 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 342-831
Cow position: chr6:181952-181454 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 291

Conread position: 342-831
Cow position: chr6:9737674-9737167 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 211

Conread position: 342-831
Cow position: chr6:10598575-10599066 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 36

Conread position: 342-841
Cow position: chr6:14826789-14827286 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 172

Conread position: 342-868
Cow position: chr6:28322731-28322205 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 342-874
Cow position: chr6:53345237-53345788 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 163

Conread position: 342-876
Cow position: chr6:28476608-28477177 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 37

Conread position: 342-880
Cow position: chr6:10422584-10423169 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 126

Conread position: 342-881
Cow position: chr6:51674357-51674916 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 37

Conread position: 342-901
Cow position: chr6:46162073-46161500 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 152

Conread position: 342-918
Cow position: chr6:24623556-24622934 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 412
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 217, 275

Conread position: 342-918
Cow position: chr6:60456267-60456868 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 117

Conread position: 342-933
Cow position: chr6:6613881-6614491 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 102

Conread position: 342-935
Cow position: chr6:9733389-9732783 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 58

Conread position: 342-951
Cow position: chr6:34075460-34076099 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 580

Conread position: 342-982
Cow position: chr6:6768727-6769384 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 145

Conread position: 342-1000
Cow position: chr6:28112248-28111566 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 554

Conread position: 342-1022
Cow position: chr6:1887209-1886523 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 329

Conread position: 342-1034
Cow position: chr6:42565128-42565843 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 78

Conread position: 342-1068
Cow position: chr6:7801920-7801208 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 139

Conread position: 342-1068
Cow position: chr6:21590167-21590892 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 12

Conread position: 342-1072
Cow position: chr6:42518409-42519177 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 680

Conread position: 342-1104
Cow position: chr6:39093207-39093972 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 41

Conread position: 342-1110
Cow position: chr6:39358891-39358110 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 170

Conread position: 342-1112
Cow position: chr6:16765951-16765163 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 122

Conread position: 342-1116
Cow position: chr6:4468204-4469005 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 160

Conread position: 342-1124
Cow position: chr6:40031635-40032426 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 37

Conread position: 342-1126
Cow position: chr6:46465274-46466066 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 69

Conread position: 342-1126
Cow position: chr6:67187136-67187934 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 301

Conread position: 342-1127
Cow position: chr6:26412825-26413639 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 69

Conread position: 342-1127
Cow position: chr6:61632156-61631358 (view UCSC Genome Browser custom track)
Alignm length: 824
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 130

Conread position: 342-1133
Cow position: chr6:63252467-63251665 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 130

Conread position: 342-1137
Cow position: chr6:35725527-35726350 (view UCSC Genome Browser custom track)
Alignm length: 835
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 43

Conread position: 342-1156
Cow position: chr6:17556832-17557655 (view UCSC Genome Browser custom track)
Alignm length: 850
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 63

Conread position: 343-524
Cow position: chr6:54491258-54491072 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 11

Conread position: 343-801
Cow position: chr6:15046657-15046175 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 12

Conread position: 344-692
Cow position: chr6:15923767-15923426 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 216
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 319, 100

Conread position: 344-699
Cow position: chr6:209310-209662 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 75

Conread position: 344-894
Cow position: chr6:16625383-16625957 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 487

Conread position: 345-479
Cow position: chr6:6278373-6278507 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 345-479
Cow position: chr6:28977907-28977771 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 116
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 345-481
Cow position: chr6:57551964-57551828 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 345-485
Cow position: chr6:54472059-54471916 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 345-488
Cow position: chr6:2110822-2110679 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 345-488
Cow position: chr6:39996000-39995855 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 12

Conread position: 345-505
Cow position: chr6:30896398-30896553 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 345-510
Cow position: chr6:34548613-34548780 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 48

Conread position: 345-513
Cow position: chr6:14690109-14690277 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 345-514
Cow position: chr6:9036297-9036128 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 36, 49

Conread position: 345-514
Cow position: chr6:39162328-39162495 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 143
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 102, 0

Conread position: 345-515
Cow position: chr6:7995454-7995285 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 345-521
Cow position: chr6:35103947-35103774 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 345-522
Cow position: chr6:9844278-9844457 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 148, 23

Conread position: 345-540
Cow position: chr6:9025491-9025683 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 62

Conread position: 345-540
Cow position: chr6:36852074-36852270 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 29

Conread position: 345-540
Cow position: chr6:54925220-54925031 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 345-571
Cow position: chr6:20328946-20329175 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 84, 226

Conread position: 345-594
Cow position: chr6:10236775-10237012 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 121, 0

Conread position: 345-634
Cow position: chr6:65898569-65898289 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 345-635
Cow position: chr6:53461578-53461291 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 345-646
Cow position: chr6:58950897-58950604 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 114, 173

Conread position: 345-660
Cow position: chr6:35435031-35435359 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 48

Conread position: 345-663
Cow position: chr6:3928727-3929044 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 87

Conread position: 345-663
Cow position: chr6:40139702-40139387 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 345-663
Cow position: chr6:46283512-46283201 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 47

Conread position: 345-663
Cow position: chr6:55141241-55140921 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 149

Conread position: 345-663
Cow position: chr6:58880764-58881083 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 215, 168

Conread position: 345-665
Cow position: chr6:47381263-47381588 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 197

Conread position: 345-675
Cow position: chr6:26914548-26914871 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 345-680
Cow position: chr6:16626310-16626627 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 242, 149

Conread position: 345-680
Cow position: chr6:17344792-17345126 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 20

Conread position: 345-680
Cow position: chr6:66550151-66550493 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 150

Conread position: 345-682
Cow position: chr6:11466474-11466134 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 36

Conread position: 345-690
Cow position: chr6:31979144-31978802 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 38

Conread position: 345-690
Cow position: chr6:34030850-34031174 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 345-690
Cow position: chr6:40157943-40157592 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 345-693
Cow position: chr6:16276321-16276681 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 69

Conread position: 345-710
Cow position: chr6:51879317-51879695 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 255
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 94, 47

Conread position: 345-725
Cow position: chr6:53739884-53740265 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 207

Conread position: 345-737
Cow position: chr6:55762832-55763233 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 345-762
Cow position: chr6:54872599-54872169 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 283
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 20

Conread position: 345-766
Cow position: chr6:54433572-54433135 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 301
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 154, 147

Conread position: 345-767
Cow position: chr6:65016448-65016014 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 23

Conread position: 345-780
Cow position: chr6:3885915-3885465 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 345-780
Cow position: chr6:11288875-11288426 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 0

Conread position: 345-787
Cow position: chr6:8205780-8206235 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 408

Conread position: 345-787
Cow position: chr6:24075110-24074667 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 75

Conread position: 345-809
Cow position: chr6:12739032-12739509 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 312
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 302

Conread position: 345-823
Cow position: chr6:26654709-26655188 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 316
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 28

Conread position: 345-825
Cow position: chr6:61162153-61162653 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 47

Conread position: 345-836
Cow position: chr6:54357938-54357422 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 87

Conread position: 345-838
Cow position: chr6:3095524-3094995 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 345-880
Cow position: chr6:2012472-2013022 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 33

Conread position: 345-884
Cow position: chr6:54293578-54294115 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 276

Conread position: 345-932
Cow position: chr6:47539968-47540584 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 14

Conread position: 345-1002
Cow position: chr6:46633704-46634373 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 35

Conread position: 345-1014
Cow position: chr6:6182134-6181432 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 572

Conread position: 345-1015
Cow position: chr6:55040774-55040077 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 594

Conread position: 345-1018
Cow position: chr6:43789775-43789076 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 132

Conread position: 345-1052
Cow position: chr6:67214188-67214924 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 167

Conread position: 345-1054
Cow position: chr6:8210138-8209428 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 187

Conread position: 345-1105
Cow position: chr6:46292886-46292127 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 345-1111
Cow position: chr6:29484567-29485317 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 127

Conread position: 345-1116
Cow position: chr6:2607050-2607847 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 488

Conread position: 345-1116
Cow position: chr6:23695444-23696233 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 47

Conread position: 345-1120
Cow position: chr6:47574378-47575134 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 155

Conread position: 345-1124
Cow position: chr6:35181801-35181007 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 113

Conread position: 345-1126
Cow position: chr6:11192987-11192229 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 42

Conread position: 345-1127
Cow position: chr6:32121340-32122146 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 93

Conread position: 346-470
Cow position: chr6:7216379-7216501 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 346-479
Cow position: chr6:16620209-16620342 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 112, 99

Conread position: 346-515
Cow position: chr6:1294048-1293883 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 346-539
Cow position: chr6:10487041-10487236 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 60, 104

Conread position: 346-694
Cow position: chr6:34115468-34115811 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 81

Conread position: 346-766
Cow position: chr6:11032750-11032318 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 208

Conread position: 346-780
Cow position: chr6:40550107-40549660 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 207

Conread position: 346-780
Cow position: chr6:41232058-41232500 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 147

Conread position: 346-891
Cow position: chr6:32211178-32210613 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 92

Conread position: 346-1022
Cow position: chr6:35613968-35613273 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 236

Conread position: 347-474
Cow position: chr6:19694408-19694535 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 347-477
Cow position: chr6:39912917-39913047 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 347-479
Cow position: chr6:58031366-58031492 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 347-509
Cow position: chr6:37388161-37388323 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 347-521
Cow position: chr6:62333155-62332982 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 155, 79

Conread position: 347-527
Cow position: chr6:68031041-68031221 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 347-663
Cow position: chr6:55944847-55944524 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 88, 24

Conread position: 347-685
Cow position: chr6:28136333-28136674 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 347-693
Cow position: chr6:9320875-9321224 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-693
Cow position: chr6:28065584-28065931 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 79

Conread position: 347-693
Cow position: chr6:44598456-44598107 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-693
Cow position: chr6:59296234-59296572 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 347-779
Cow position: chr6:44146356-44145910 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 205

Conread position: 347-779
Cow position: chr6:51869532-51869974 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 220

Conread position: 347-782
Cow position: chr6:7467056-7466608 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-782
Cow position: chr6:18912140-18911691 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 207

Conread position: 347-782
Cow position: chr6:19719162-19719613 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 347-782
Cow position: chr6:28000801-28000355 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 204

Conread position: 347-782
Cow position: chr6:43039507-43039952 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 205

Conread position: 347-782
Cow position: chr6:46948410-46948855 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 109

Conread position: 347-782
Cow position: chr6:55239285-55239733 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 205

Conread position: 347-782
Cow position: chr6:57308819-57309264 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 45

Conread position: 347-782
Cow position: chr6:58940775-58940329 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 61

Conread position: 347-782
Cow position: chr6:63040738-63040292 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 36

Conread position: 347-782
Cow position: chr6:67553827-67554274 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 137

Conread position: 347-998
Cow position: chr6:56842617-56843274 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 125

Conread position: 347-1054
Cow position: chr6:6342879-6343607 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 141

Conread position: 347-1054
Cow position: chr6:46570573-46571282 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 76

Conread position: 348-557
Cow position: chr6:48343436-48343649 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 349-586
Cow position: chr6:51544484-51544244 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 206

Conread position: 349-693
Cow position: chr6:29503483-29503826 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 224
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 207, 260

Conread position: 349-777
Cow position: chr6:41876604-41876165 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 0

Conread position: 350-445
Cow position: chr6:25436168-25436073 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 350-450
Cow position: chr6:33808836-33808736 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 350-454
Cow position: chr6:54978931-54978827 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 350-477
Cow position: chr6:34195411-34195538 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 111
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 350-477
Cow position: chr6:42988204-42988078 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 350-495
Cow position: chr6:1245323-1245178 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 350-508
Cow position: chr6:126537-126379 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 133
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 350-521
Cow position: chr6:50503172-50503341 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 350-526
Cow position: chr6:889153-889329 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 350-527
Cow position: chr6:63177641-63177818 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 110
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 350-530
Cow position: chr6:45479490-45479310 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 350-541
Cow position: chr6:57329876-57330067 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 350-563
Cow position: chr6:54900687-54900900 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-612
Cow position: chr6:39897465-39897203 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-620
Cow position: chr6:34236196-34235933 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 190, 43

Conread position: 350-637
Cow position: chr6:30704973-30705260 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-656
Cow position: chr6:18474459-18474153 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 350-660
Cow position: chr6:28675126-28675437 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-663
Cow position: chr6:48579125-48578795 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 143, 0

Conread position: 350-690
Cow position: chr6:20515173-20515516 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-693
Cow position: chr6:22628130-22627784 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-693
Cow position: chr6:39080515-39080861 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-693
Cow position: chr6:45723527-45723180 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 204

Conread position: 350-693
Cow position: chr6:45747410-45747063 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 350-761
Cow position: chr6:7009193-7009587 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 116

Conread position: 350-766
Cow position: chr6:30708599-30708172 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-772
Cow position: chr6:58390424-58389996 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 86

Conread position: 350-779
Cow position: chr6:11401918-11402359 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 283

Conread position: 350-780
Cow position: chr6:6557469-6557912 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-780
Cow position: chr6:14389128-14388685 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-780
Cow position: chr6:25363149-25363592 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-780
Cow position: chr6:27541159-27541602 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-780
Cow position: chr6:41823239-41822796 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chr6:444330-443885 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chr6:2867862-2867417 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chr6:2875438-2875002 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chr6:9235110-9235555 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 359

Conread position: 350-782
Cow position: chr6:12971994-12972439 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chr6:13488992-13489437 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-782
Cow position: chr6:19515448-19515893 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chr6:20581181-20580736 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chr6:21163901-21164346 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chr6:25375856-25376302 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chr6:27173439-27173884 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-782
Cow position: chr6:36258552-36258997 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 202

Conread position: 350-782
Cow position: chr6:41158723-41158278 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chr6:45765523-45765078 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chr6:45976097-45976542 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chr6:46607909-46607466 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 137

Conread position: 350-782
Cow position: chr6:53271252-53271697 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-782
Cow position: chr6:55388335-55388779 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-782
Cow position: chr6:56888010-56888446 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chr6:59052016-59052461 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chr6:59834676-59835121 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chr6:62665373-62665819 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 350-787
Cow position: chr6:34017126-34016675 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 350-792
Cow position: chr6:53542885-53542416 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 28

Conread position: 350-879
Cow position: chr6:48807537-48806993 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 71

Conread position: 350-881
Cow position: chr6:52557025-52556472 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 71

Conread position: 350-1022
Cow position: chr6:4865090-4864403 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 23

Conread position: 350-1036
Cow position: chr6:11169169-11169861 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 27

Conread position: 350-1128
Cow position: chr6:28147704-28148504 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 253

Conread position: 351-540
Cow position: chr6:65829587-65829401 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 351-792
Cow position: chr6:43394133-43394571 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 107

Conread position: 352-663
Cow position: chr6:47988517-47988822 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 352-666
Cow position: chr6:57680939-57680617 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 119

Conread position: 352-782
Cow position: chr6:67403768-67403325 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 0

Conread position: 353-818
Cow position: chr6:6596030-6596512 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 309

Conread position: 354-446
Cow position: chr6:55360973-55360881 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 354-446
Cow position: chr6:55361193-55361101 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 354-467
Cow position: chr6:42897792-42897905 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 354-482
Cow position: chr6:46225363-46225235 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 113
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 354-512
Cow position: chr6:41437471-41437629 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 133
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 354-519
Cow position: chr6:18874776-18874941 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 354-541
Cow position: chr6:6569286-6569473 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 354-541
Cow position: chr6:8207828-8208015 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 354-541
Cow position: chr6:10536377-10536190 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 354-541
Cow position: chr6:19684365-19684178 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 354-541
Cow position: chr6:37217241-37217428 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 354-541
Cow position: chr6:53537678-53537865 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 354-563
Cow position: chr6:8442955-8442746 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-563
Cow position: chr6:28401247-28401454 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 139

Conread position: 354-589
Cow position: chr6:26324598-26324364 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 66

Conread position: 354-617
Cow position: chr6:60379765-60380028 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-623
Cow position: chr6:1274255-1273991 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 26

Conread position: 354-631
Cow position: chr6:55289566-55289291 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 71

Conread position: 354-632
Cow position: chr6:41495236-41494958 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-635
Cow position: chr6:29298819-29299099 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 354-650
Cow position: chr6:40760627-40760939 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 354-662
Cow position: chr6:56557010-56556702 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-663
Cow position: chr6:38440415-38440730 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 88

Conread position: 354-663
Cow position: chr6:44131251-44130942 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-671
Cow position: chr6:32665032-32665349 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-692
Cow position: chr6:28700963-28700622 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-693
Cow position: chr6:327761-327420 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 332

Conread position: 354-693
Cow position: chr6:19707031-19707373 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-693
Cow position: chr6:19712643-19712306 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-693
Cow position: chr6:26771520-26771177 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-693
Cow position: chr6:28487059-28486717 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 354-693
Cow position: chr6:63714674-63714346 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 95

Conread position: 354-708
Cow position: chr6:11389012-11388665 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 354-766
Cow position: chr6:25374506-25374083 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-777
Cow position: chr6:19103306-19102871 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 200

Conread position: 354-777
Cow position: chr6:49794559-49794996 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 199

Conread position: 354-779
Cow position: chr6:1406550-1406113 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 31

Conread position: 354-779
Cow position: chr6:10044808-10045246 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-779
Cow position: chr6:13307796-13307367 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 172

Conread position: 354-782
Cow position: chr6:1797227-1797668 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:2196286-2196731 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chr6:2390075-2389634 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chr6:3152814-3153256 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:7449097-7449538 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chr6:8284173-8283754 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 81

Conread position: 354-782
Cow position: chr6:10013399-10013840 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chr6:11020260-11020701 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:11453265-11452824 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:12998018-12998459 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chr6:13494491-13494048 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 354-782
Cow position: chr6:19570329-19569894 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chr6:20215794-20215353 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:22737104-22736667 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:23568006-23567565 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:27093985-27093545 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 354-782
Cow position: chr6:28184719-28184278 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chr6:28294223-28293782 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chr6:33489632-33489192 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chr6:33884481-33884040 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chr6:38061214-38061654 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chr6:40278654-40279095 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:40450066-40449624 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 199

Conread position: 354-782
Cow position: chr6:41834903-41835343 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 66

Conread position: 354-782
Cow position: chr6:43049614-43050051 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 25

Conread position: 354-782
Cow position: chr6:45901391-45900950 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chr6:45937881-45938322 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:52481947-52482388 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chr6:57521777-57522218 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chr6:61549125-61548684 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chr6:65818630-65818191 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 200

Conread position: 354-838
Cow position: chr6:26830129-26830633 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 354-838
Cow position: chr6:43921238-43921740 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-1004
Cow position: chr6:3574892-3575568 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 84

Conread position: 354-1124
Cow position: chr6:18987685-18988438 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 56

Conread position: 355-515
Cow position: chr6:68377339-68377181 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 355-614
Cow position: chr6:451661-451402 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 355-720
Cow position: chr6:19809135-19809505 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 128

Conread position: 355-782
Cow position: chr6:20173985-20174425 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 197

Conread position: 355-1048
Cow position: chr6:6068231-6067531 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 356-782
Cow position: chr6:22804917-22804474 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 37

Conread position: 357-693
Cow position: chr6:20268143-20268471 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 57

Conread position: 357-780
Cow position: chr6:25790133-25789696 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 358-447
Cow position: chr6:43439913-43440002 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 358-460
Cow position: chr6:119206-119308 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 358-488
Cow position: chr6:40284356-40284226 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 111
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 358-516
Cow position: chr6:46763800-46763643 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 137, 0

Conread position: 358-550
Cow position: chr6:44623547-44623355 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 358-550
Cow position: chr6:61055782-61055590 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 99

Conread position: 358-563
Cow position: chr6:35703925-35703727 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 0

Conread position: 358-570
Cow position: chr6:561290-561084 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 358-570
Cow position: chr6:15987036-15987246 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 358-586
Cow position: chr6:7191018-7190788 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 212

Conread position: 358-634
Cow position: chr6:43087009-43086733 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 169

Conread position: 358-663
Cow position: chr6:619016-619309 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 199, 16

Conread position: 358-663
Cow position: chr6:30076666-30076357 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 187, 53

Conread position: 358-663
Cow position: chr6:45279699-45279388 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 147, 232

Conread position: 358-668
Cow position: chr6:1468329-1468026 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 158, 34

Conread position: 358-682
Cow position: chr6:57383970-57384283 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 358-689
Cow position: chr6:8303672-8303335 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 22

Conread position: 358-693
Cow position: chr6:12662723-12662386 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 35

Conread position: 358-693
Cow position: chr6:27870218-27870556 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 62

Conread position: 358-693
Cow position: chr6:28161015-28161350 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 132

Conread position: 358-693
Cow position: chr6:41192953-41193294 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 358-711
Cow position: chr6:24044946-24044582 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 238
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 23

Conread position: 358-720
Cow position: chr6:65921149-65920789 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 136

Conread position: 358-747
Cow position: chr6:33451427-33451822 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 230

Conread position: 358-761
Cow position: chr6:29430437-29430841 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 268
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 189, 12

Conread position: 358-762
Cow position: chr6:9756005-9755616 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 269
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 196, 21

Conread position: 358-777
Cow position: chr6:7175044-7174621 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 161

Conread position: 358-777
Cow position: chr6:56441474-56441042 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 0

Conread position: 358-779
Cow position: chr6:1279054-1278623 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 55

Conread position: 358-779
Cow position: chr6:31752512-31752940 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 83

Conread position: 358-780
Cow position: chr6:64720753-64721180 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 204

Conread position: 358-782
Cow position: chr6:6568628-6568199 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 275

Conread position: 358-782
Cow position: chr6:7137736-7137300 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 358-782
Cow position: chr6:11869329-11868894 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 22

Conread position: 358-782
Cow position: chr6:16645482-16645914 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 21

Conread position: 358-782
Cow position: chr6:17632164-17631726 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 195

Conread position: 358-782
Cow position: chr6:18803453-18803017 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 394

Conread position: 358-782
Cow position: chr6:21712312-21712749 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 358-782
Cow position: chr6:22043404-22042970 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 290

Conread position: 358-782
Cow position: chr6:23879453-23879016 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 358-782
Cow position: chr6:26667419-26666981 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 358-782
Cow position: chr6:31520044-31520481 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 0

Conread position: 358-782
Cow position: chr6:36901616-36902053 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 194

Conread position: 358-782
Cow position: chr6:38917434-38916996 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 196

Conread position: 358-782
Cow position: chr6:43621625-43622057 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 194

Conread position: 358-782
Cow position: chr6:54887009-54886572 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 358-782
Cow position: chr6:56926648-56927090 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 176

Conread position: 358-786
Cow position: chr6:39998872-39998433 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 34

Conread position: 358-790
Cow position: chr6:5501339-5500893 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 358-790
Cow position: chr6:16049690-16049252 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 203

Conread position: 358-809
Cow position: chr6:50800961-50800484 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 286

Conread position: 358-813
Cow position: chr6:65891473-65891015 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 23

Conread position: 358-814
Cow position: chr6:68829899-68830366 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 441

Conread position: 358-819
Cow position: chr6:38900300-38899818 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 332
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 202, 45

Conread position: 358-824
Cow position: chr6:14064201-14063720 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 140

Conread position: 358-825
Cow position: chr6:42931639-42931163 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 79

Conread position: 358-847
Cow position: chr6:49411220-49410725 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 134

Conread position: 358-895
Cow position: chr6:16618615-16619162 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 190

Conread position: 358-985
Cow position: chr6:3271875-3271240 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 439

Conread position: 358-1023
Cow position: chr6:12550724-12551415 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 394

Conread position: 358-1035
Cow position: chr6:47339907-47339199 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 508

Conread position: 358-1054
Cow position: chr6:5302939-5302245 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 10

Conread position: 358-1112
Cow position: chr6:8636735-8637517 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 35

Conread position: 359-498
Cow position: chr6:2546000-2546138 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 359-528
Cow position: chr6:54321101-54320935 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 47

Conread position: 359-533
Cow position: chr6:14758922-14758755 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 33

Conread position: 359-613
Cow position: chr6:15481168-15481424 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 191, 97

Conread position: 359-645
Cow position: chr6:12518686-12518977 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 359-651
Cow position: chr6:3545098-3545398 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 148, 106

Conread position: 359-656
Cow position: chr6:28549168-28548856 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 20

Conread position: 359-656
Cow position: chr6:55660274-55659979 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 191, 64

Conread position: 359-662
Cow position: chr6:4046576-4046274 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 33

Conread position: 359-662
Cow position: chr6:16630097-16630398 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 72

Conread position: 359-663
Cow position: chr6:10570299-10569996 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 268, 20

Conread position: 359-663
Cow position: chr6:26636247-26636556 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 48

Conread position: 359-663
Cow position: chr6:49733392-49733696 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 245

Conread position: 359-663
Cow position: chr6:65858743-65858446 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 117, 39

Conread position: 359-682
Cow position: chr6:24583784-24583455 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 133

Conread position: 359-682
Cow position: chr6:45065573-45065253 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 61

Conread position: 359-692
Cow position: chr6:23811161-23811496 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 216
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 191, 26

Conread position: 359-693
Cow position: chr6:11185031-11185368 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 193

Conread position: 359-693
Cow position: chr6:18462947-18462605 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 212
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 179, 81

Conread position: 359-706
Cow position: chr6:15783382-15783031 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 81

Conread position: 359-713
Cow position: chr6:6039423-6039784 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 227
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 86

Conread position: 359-760
Cow position: chr6:6079452-6079033 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 117

Conread position: 359-761
Cow position: chr6:23889215-23888794 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 283
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 133, 24

Conread position: 359-761
Cow position: chr6:30893064-30892651 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 404

Conread position: 359-777
Cow position: chr6:6340612-6341039 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 280
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 191, 61

Conread position: 359-782
Cow position: chr6:27152282-27152718 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 0

Conread position: 359-782
Cow position: chr6:61051516-61051080 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 194

Conread position: 359-792
Cow position: chr6:55266155-55265731 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 115

Conread position: 359-810
Cow position: chr6:2088118-2088590 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 26

Conread position: 359-817
Cow position: chr6:35121797-35121337 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 34

Conread position: 359-819
Cow position: chr6:32262531-32262054 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 22

Conread position: 359-839
Cow position: chr6:52120688-52121192 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 179

Conread position: 360-511
Cow position: chr6:30159030-30159174 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 22

Conread position: 360-689
Cow position: chr6:28503795-28504132 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 262

Conread position: 360-824
Cow position: chr6:49442574-49443027 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 33

Conread position: 360-900
Cow position: chr6:2366684-2366094 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 407
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 191, 50

Conread position: 361-663
Cow position: chr6:55456468-55456159 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 191, 83

Conread position: 361-679
Cow position: chr6:48327815-48328138 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 67, 32

Conread position: 361-680
Cow position: chr6:42742209-42742525 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 142

Conread position: 361-692
Cow position: chr6:60441604-60441929 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 361-760
Cow position: chr6:36826216-36826630 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 266
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 55

Conread position: 361-782
Cow position: chr6:49579706-49580140 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 361-839
Cow position: chr6:12622932-12623427 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 12

Conread position: 361-1003
Cow position: chr6:28084563-28083897 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 362-502
Cow position: chr6:24545222-24545364 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 362-682
Cow position: chr6:16298111-16298440 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 30

Conread position: 362-690
Cow position: chr6:35416372-35416025 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 87, 63

Conread position: 362-692
Cow position: chr6:27477463-27477796 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 18

Conread position: 362-693
Cow position: chr6:37829951-37829622 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 185, 23

Conread position: 362-841
Cow position: chr6:17865000-17865499 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 138

Conread position: 363-499
Cow position: chr6:57857483-57857622 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 54

Conread position: 363-557
Cow position: chr6:20419997-20419805 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 164, 18

Conread position: 363-657
Cow position: chr6:22663253-22662952 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 10

Conread position: 363-762
Cow position: chr6:10425880-10426301 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 279
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 144, 0

Conread position: 363-782
Cow position: chr6:43955163-43955595 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 189

Conread position: 363-808
Cow position: chr6:19328377-19327933 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 30

Conread position: 363-809
Cow position: chr6:6187726-6188179 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 91

Conread position: 363-862
Cow position: chr6:39088236-39088754 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 29

Conread position: 364-682
Cow position: chr6:21584299-21583974 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 188, 19

Conread position: 364-766
Cow position: chr6:65011764-65012163 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 258
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 207, 16

Conread position: 365-613
Cow position: chr6:35710861-35711111 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 40

Conread position: 365-682
Cow position: chr6:9322605-9322920 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 100

Conread position: 365-1100
Cow position: chr6:27240501-27239781 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 219

Conread position: 366-505
Cow position: chr6:32135223-32135363 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 366-1125
Cow position: chr6:5096069-5095294 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 60

Conread position: 367-658
Cow position: chr6:7824077-7824373 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 154

Conread position: 367-681
Cow position: chr6:68048716-68049030 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 221

Conread position: 367-1137
Cow position: chr6:10612322-10613088 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 284

Conread position: 368-629
Cow position: chr6:51385871-51386137 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 20

Conread position: 368-671
Cow position: chr6:30315661-30315351 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 368-771
Cow position: chr6:222972-222550 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 138

Conread position: 368-801
Cow position: chr6:3719451-3719897 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 55

Conread position: 368-830
Cow position: chr6:28180496-28180022 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 26

Conread position: 368-1102
Cow position: chr6:54648058-54647274 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 14

Conread position: 369-518
Cow position: chr6:11269462-11269317 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 369-667
Cow position: chr6:2894697-2894993 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 369-693
Cow position: chr6:39099624-39099289 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 52

Conread position: 369-1144
Cow position: chr6:18448046-18447247 (view UCSC Genome Browser custom track)
Alignm length: 814
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 459

Conread position: 370-628
Cow position: chr6:18969224-18968962 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 80, 50

Conread position: 370-779
Cow position: chr6:12578045-12578459 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 270
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 153, 106

Conread position: 370-782
Cow position: chr6:8194762-8195186 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 98

Conread position: 370-782
Cow position: chr6:31548960-31548538 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 50

Conread position: 371-573
Cow position: chr6:41567303-41567505 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 181

Conread position: 371-655
Cow position: chr6:21222406-21222693 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 174, 43

Conread position: 371-693
Cow position: chr6:13597550-13597225 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 182

Conread position: 371-693
Cow position: chr6:49963544-49963219 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 182

Conread position: 371-767
Cow position: chr6:50527121-50527531 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 371-773
Cow position: chr6:19115394-19115797 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 84

Conread position: 371-1127
Cow position: chr6:15938375-15937602 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 127

Conread position: 372-790
Cow position: chr6:42106572-42106154 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 35

Conread position: 373-613
Cow position: chr6:9368606-9368354 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 373-780
Cow position: chr6:2185881-2185462 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 356

Conread position: 374-544
Cow position: chr6:46667242-46667074 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 19

Conread position: 374-662
Cow position: chr6:16132628-16132917 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 182, 0

Conread position: 374-663
Cow position: chr6:6038628-6038343 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 19

Conread position: 374-690
Cow position: chr6:15182360-15182675 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 194

Conread position: 374-782
Cow position: chr6:25207058-25207479 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 178

Conread position: 374-809
Cow position: chr6:6839210-6839658 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 294
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 35

Conread position: 374-810
Cow position: chr6:31953207-31952744 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 312
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 155, 19

Conread position: 374-946
Cow position: chr6:18962047-18961447 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 47

Conread position: 374-1015
Cow position: chr6:25822525-25821871 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 24

Conread position: 375-539
Cow position: chr6:9207859-9207692 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 375-636
Cow position: chr6:55040901-55041162 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 375-663
Cow position: chr6:39957835-39958127 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 172, 78

Conread position: 375-931
Cow position: chr6:38233481-38234011 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 16

Conread position: 376-692
Cow position: chr6:34253262-34253585 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 171, 20

Conread position: 376-693
Cow position: chr6:24757874-24757554 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 0

Conread position: 376-693
Cow position: chr6:49707124-49706804 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 0

Conread position: 376-761
Cow position: chr6:51370576-51370969 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 264
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 171, 44

Conread position: 376-780
Cow position: chr6:28172691-28173110 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 376-782
Cow position: chr6:2089883-2090301 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 19

Conread position: 376-793
Cow position: chr6:1914104-1914520 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 169

Conread position: 377-777
Cow position: chr6:32287095-32287503 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 149

Conread position: 377-834
Cow position: chr6:14929069-14929532 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 177

Conread position: 377-931
Cow position: chr6:606738-607313 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 175

Conread position: 377-932
Cow position: chr6:66304363-66303787 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 161

Conread position: 378-618
Cow position: chr6:55387073-55387318 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 96

Conread position: 378-780
Cow position: chr6:18418976-18418561 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 175

Conread position: 378-879
Cow position: chr6:58075698-58076231 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 378-1161
Cow position: chr6:27852230-27851418 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 116

Conread position: 380-537
Cow position: chr6:52900506-52900659 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 380-667
Cow position: chr6:12629497-12629783 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 114

Conread position: 380-882
Cow position: chr6:63197702-63197161 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 362
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 66, 121

Conread position: 381-615
Cow position: chr6:12389336-12389579 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 381-792
Cow position: chr6:12977293-12977717 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 268
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 78

Conread position: 382-518
Cow position: chr6:21003867-21004004 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 382-658
Cow position: chr6:1891379-1891107 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 119

Conread position: 382-672
Cow position: chr6:7835510-7835789 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 55

Conread position: 382-762
Cow position: chr6:27815980-27815625 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 147, 39

Conread position: 382-773
Cow position: chr6:61443631-61443221 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 382-780
Cow position: chr6:55842692-55842271 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 390

Conread position: 382-826
Cow position: chr6:22507233-22507684 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 50

Conread position: 383-540
Cow position: chr6:1836046-1836203 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 383-663
Cow position: chr6:59620126-59620402 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 24

Conread position: 383-690
Cow position: chr6:63768383-63768068 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 162, 48

Conread position: 383-693
Cow position: chr6:19443079-19443391 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 10, 234

Conread position: 383-747
Cow position: chr6:46528904-46529268 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 173, 117

Conread position: 384-541
Cow position: chr6:61268606-61268763 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 384-653
Cow position: chr6:40169546-40169277 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 168

Conread position: 384-747
Cow position: chr6:59507825-59508206 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 26

Conread position: 385-508
Cow position: chr6:45952550-45952427 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 385-539
Cow position: chr6:24557076-24557232 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 385-651
Cow position: chr6:47155014-47155276 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 44

Conread position: 385-680
Cow position: chr6:21541557-21541858 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 385-693
Cow position: chr6:26614696-26615018 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 165, 46

Conread position: 385-761
Cow position: chr6:1734035-1733644 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 207

Conread position: 385-766
Cow position: chr6:62211229-62211627 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 262
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 14

Conread position: 385-771
Cow position: chr6:28053061-28052661 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 257
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 46

Conread position: 385-776
Cow position: chr6:32497451-32497832 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 262
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 201, 35

Conread position: 386-556
Cow position: chr6:6190911-6191081 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-789
Cow position: chr6:8145396-8144970 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 292
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 170, 31

Conread position: 386-1123
Cow position: chr6:52478958-52478165 (view UCSC Genome Browser custom track)
Alignm length: 801
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 33

Conread position: 386-1135
Cow position: chr6:17414963-17414191 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 66

Conread position: 387-505
Cow position: chr6:24652803-24652918 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 387-665
Cow position: chr6:64815544-64815260 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 160, 209

Conread position: 387-675
Cow position: chr6:16596624-16596917 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 170, 260

Conread position: 387-688
Cow position: chr6:41707097-41707404 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 167, 0

Conread position: 387-779
Cow position: chr6:33509071-33509469 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 32

Conread position: 388-778
Cow position: chr6:21857372-21857774 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 0

Conread position: 388-780
Cow position: chr6:37736556-37736961 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 164

Conread position: 388-792
Cow position: chr6:43999528-43999105 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 388-808
Cow position: chr6:17456357-17456790 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 300
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 162, 21

Conread position: 388-1116
Cow position: chr6:33460578-33461345 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 228

Conread position: 388-1128
Cow position: chr6:16699748-16700506 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 90

Conread position: 389-665
Cow position: chr6:66169861-66170142 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 79

Conread position: 389-691
Cow position: chr6:14306576-14306883 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 40

Conread position: 390-691
Cow position: chr6:53968980-53968688 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 64

Conread position: 391-563
Cow position: chr6:24713735-24713563 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 144
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 154, 161

Conread position: 393-557
Cow position: chr6:49391619-49391458 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 0

Conread position: 393-582
Cow position: chr6:23113222-23113413 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 159, 0

Conread position: 393-648
Cow position: chr6:1077624-1077359 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 0

Conread position: 393-690
Cow position: chr6:21396578-21396281 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 243

Conread position: 393-740
Cow position: chr6:47532307-47532652 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 231
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 21

Conread position: 393-782
Cow position: chr6:13531305-13531707 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 159

Conread position: 393-880
Cow position: chr6:643102-642562 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 0

Conread position: 394-682
Cow position: chr6:13717306-13717601 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 166, 74

Conread position: 394-823
Cow position: chr6:20747149-20747592 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 145, 106

Conread position: 395-540
Cow position: chr6:29833597-29833452 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 395-563
Cow position: chr6:34386773-34386941 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 140
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 150, 157

Conread position: 395-682
Cow position: chr6:44949790-44949497 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 129, 28

Conread position: 395-693
Cow position: chr6:34405342-34405039 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 103

Conread position: 395-779
Cow position: chr6:41556966-41557363 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 47

Conread position: 395-819
Cow position: chr6:36918679-36918237 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 231

Conread position: 395-1015
Cow position: chr6:28791321-28791969 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 257

Conread position: 396-662
Cow position: chr6:52240046-52239774 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 156, 30

Conread position: 397-780
Cow position: chr6:45751578-45751974 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 155

Conread position: 398-663
Cow position: chr6:6163742-6164005 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 154, 22

Conread position: 398-761
Cow position: chr6:12506080-12505709 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 160, 42

Conread position: 398-761
Cow position: chr6:15991302-15990932 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 150, 100

Conread position: 398-780
Cow position: chr6:41470563-41470958 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 154

Conread position: 399-647
Cow position: chr6:39848552-39848808 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 399-761
Cow position: chr6:67243120-67242748 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 242
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 149, 108

Conread position: 399-767
Cow position: chr6:60516227-60516606 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 155

Conread position: 399-782
Cow position: chr6:56080270-56079876 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 154

Conread position: 399-782
Cow position: chr6:63177767-63178163 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 153

Conread position: 399-891
Cow position: chr6:66431351-66431835 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 335
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 264, 54

Conread position: 400-643
Cow position: chr6:33470759-33471009 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 400-782
Cow position: chr6:18503166-18502771 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 153

Conread position: 401-651
Cow position: chr6:1510071-1510325 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 401-663
Cow position: chr6:23532098-23532363 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 401-679
Cow position: chr6:16103748-16103470 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 18

Conread position: 401-680
Cow position: chr6:44375389-44375675 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 165, 55

Conread position: 401-683
Cow position: chr6:42727018-42726731 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 9

Conread position: 401-1028
Cow position: chr6:14696872-14696215 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 159

Conread position: 402-541
Cow position: chr6:51049097-51049234 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 402-678
Cow position: chr6:52189350-52189067 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 147, 193

Conread position: 402-771
Cow position: chr6:4824462-4824843 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 18

Conread position: 403-571
Cow position: chr6:39109727-39109558 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 23

Conread position: 403-693
Cow position: chr6:58707846-58707537 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 403-742
Cow position: chr6:6817256-6817604 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 97

Conread position: 404-663
Cow position: chr6:66873833-66874089 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 404-797
Cow position: chr6:12963953-12964353 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 258
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 136

Conread position: 405-782
Cow position: chr6:14198300-14198687 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 99

Conread position: 407-674
Cow position: chr6:38896367-38896101 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 156

Conread position: 407-678
Cow position: chr6:610912-611191 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 140, 74

Conread position: 407-761
Cow position: chr6:60781953-60781580 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 58

Conread position: 408-693
Cow position: chr6:6120780-6120508 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 18

Conread position: 411-512
Cow position: chr6:20379901-20380002 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 411-604
Cow position: chr6:20410678-20410492 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 411-639
Cow position: chr6:14289863-14289630 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 151, 83

Conread position: 411-643
Cow position: chr6:59277693-59277454 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 411-665
Cow position: chr6:35238508-35238253 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 11

Conread position: 411-680
Cow position: chr6:41677620-41677896 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 143, 23

Conread position: 411-761
Cow position: chr6:31654605-31654245 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 236
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 122, 82

Conread position: 411-761
Cow position: chr6:60891140-60890773 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 159, 191

Conread position: 411-771
Cow position: chr6:33865583-33865216 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 82

Conread position: 411-777
Cow position: chr6:51296691-51296331 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 167

Conread position: 411-782
Cow position: chr6:25410115-25410499 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 141

Conread position: 411-792
Cow position: chr6:39416839-39417236 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 254
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 134, 95

Conread position: 411-819
Cow position: chr6:16518370-16517921 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 411-820
Cow position: chr6:16251700-16252112 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 29

Conread position: 411-890
Cow position: chr6:17932585-17933098 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 343
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 89, 405

Conread position: 412-693
Cow position: chr6:10706398-10706113 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 34

Conread position: 412-793
Cow position: chr6:35274962-35274564 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 8

Conread position: 414-693
Cow position: chr6:15310351-15310069 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 414-830
Cow position: chr6:22216069-22215656 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 222

Conread position: 415-678
Cow position: chr6:18142644-18142897 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 415-933
Cow position: chr6:5958498-5957974 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 64

Conread position: 416-513
Cow position: chr6:37597405-37597502 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 416-671
Cow position: chr6:32335092-32335362 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 416-744
Cow position: chr6:58370081-58370430 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 416-776
Cow position: chr6:59077048-59076685 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 137

Conread position: 416-782
Cow position: chr6:19819108-19819487 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 0

Conread position: 416-947
Cow position: chr6:36928165-36928730 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 410

Conread position: 417-651
Cow position: chr6:59687269-59687496 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 134, 81

Conread position: 417-657
Cow position: chr6:37515323-37515569 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 87, 9

Conread position: 417-785
Cow position: chr6:41152181-41152541 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 246, 9

Conread position: 417-860
Cow position: chr6:1784250-1783797 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 242

Conread position: 418-793
Cow position: chr6:18977127-18977526 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 284
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 63, 119

Conread position: 419-793
Cow position: chr6:60673066-60673448 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 90

Conread position: 419-803
Cow position: chr6:5866876-5866462 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 285
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 123, 0

Conread position: 419-813
Cow position: chr6:45155640-45156040 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 123

Conread position: 420-665
Cow position: chr6:22995461-22995213 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 44

Conread position: 420-690
Cow position: chr6:61136684-61136956 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 420-752
Cow position: chr6:62015164-62015506 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 168

Conread position: 420-777
Cow position: chr6:5851906-5851542 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 108

Conread position: 420-782
Cow position: chr6:45591813-45592192 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 132

Conread position: 420-839
Cow position: chr6:67544774-67544339 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 420-1112
Cow position: chr6:36471049-36470343 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 54

Conread position: 420-1116
Cow position: chr6:65711345-65712058 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 429

Conread position: 421-777
Cow position: chr6:28558956-28559302 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 189

Conread position: 421-790
Cow position: chr6:11704712-11705094 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 130, 56

Conread position: 421-794
Cow position: chr6:20689803-20689424 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 146

Conread position: 422-541
Cow position: chr6:67969442-67969323 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 422-548
Cow position: chr6:61605726-61605852 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 422-663
Cow position: chr6:46251444-46251200 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 16

Conread position: 422-663
Cow position: chr6:47640980-47640736 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 87

Conread position: 422-773
Cow position: chr6:13945527-13945897 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 136

Conread position: 422-1124
Cow position: chr6:53178157-53178873 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 480

Conread position: 423-605
Cow position: chr6:36892383-36892565 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 423-780
Cow position: chr6:55720839-55721209 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 129

Conread position: 424-692
Cow position: chr6:46246573-46246312 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 424-1137
Cow position: chr6:64431469-64432194 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 153

Conread position: 425-662
Cow position: chr6:53918205-53917968 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 425-785
Cow position: chr6:41215911-41216289 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 171

Conread position: 426-663
Cow position: chr6:23366249-23366012 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 130, 39

Conread position: 426-761
Cow position: chr6:48107557-48107900 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 126, 35

Conread position: 426-779
Cow position: chr6:55361630-55361996 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 126

Conread position: 426-880
Cow position: chr6:61575117-61575612 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 68

Conread position: 428-819
Cow position: chr6:52627136-52627547 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 146

Conread position: 429-550
Cow position: chr6:5610130-5610009 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 429-693
Cow position: chr6:12648052-12648328 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 69, 156

Conread position: 429-693
Cow position: chr6:50755550-50755817 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 123

Conread position: 429-776
Cow position: chr6:21694238-21694585 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 227
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 155, 76

Conread position: 429-782
Cow position: chr6:18649236-18648871 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 86

Conread position: 429-782
Cow position: chr6:65863001-65863367 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 429-814
Cow position: chr6:48946843-48946439 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 110

Conread position: 429-888
Cow position: chr6:65871441-65871902 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 7

Conread position: 429-929
Cow position: chr6:3979135-3978612 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 291

Conread position: 429-1001
Cow position: chr6:28811472-28810875 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 23

Conread position: 429-1116
Cow position: chr6:1770666-1769955 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 46

Conread position: 430-1127
Cow position: chr6:32867677-32866971 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 64

Conread position: 431-680
Cow position: chr6:1561634-1561883 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 82

Conread position: 431-693
Cow position: chr6:37735307-37735579 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 200

Conread position: 431-737
Cow position: chr6:31256615-31256932 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 116, 64

Conread position: 432-614
Cow position: chr6:58172616-58172798 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 97, 20

Conread position: 432-642
Cow position: chr6:57777537-57777327 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 138, 42

Conread position: 432-682
Cow position: chr6:40323642-40323892 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 123, 201

Conread position: 432-884
Cow position: chr6:44098618-44099095 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 0

Conread position: 433-789
Cow position: chr6:35132691-35133065 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 103, 0

Conread position: 433-809
Cow position: chr6:4156013-4155609 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 127, 11

Conread position: 433-1137
Cow position: chr6:13688280-13687558 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 67

Conread position: 434-541
Cow position: chr6:40511557-40511450 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 434-570
Cow position: chr6:44216911-44217046 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 133, 0

Conread position: 434-678
Cow position: chr6:2324681-2324417 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 170

Conread position: 434-732
Cow position: chr6:18905041-18904732 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 84

Conread position: 434-738
Cow position: chr6:53100568-53100891 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 164

Conread position: 434-782
Cow position: chr6:9226200-9226559 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 118

Conread position: 434-782
Cow position: chr6:31568166-31567806 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 229
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 111, 100

Conread position: 435-662
Cow position: chr6:9469194-9469436 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 121, 0

Conread position: 435-693
Cow position: chr6:51467996-51468254 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 249

Conread position: 435-824
Cow position: chr6:32427782-32428171 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 148

Conread position: 436-571
Cow position: chr6:11907643-11907777 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 436-760
Cow position: chr6:55573578-55573238 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 109, 39

Conread position: 436-885
Cow position: chr6:22877616-22877150 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 87

Conread position: 436-1102
Cow position: chr6:51834938-51835623 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 27

Conread position: 437-779
Cow position: chr6:39096350-39095996 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 45

Conread position: 437-933
Cow position: chr6:23987204-23986691 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 338

Conread position: 438-663
Cow position: chr6:56376854-56376621 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 438-777
Cow position: chr6:66751422-66751775 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 208, 56

Conread position: 438-819
Cow position: chr6:7253902-7253486 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 105

Conread position: 439-579
Cow position: chr6:11108730-11108873 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 439-793
Cow position: chr6:39301284-39300920 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 8

Conread position: 439-1015
Cow position: chr6:43188430-43189032 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 113

Conread position: 440-573
Cow position: chr6:36201392-36201525 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 74

Conread position: 440-623
Cow position: chr6:47923767-47923576 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 440-693
Cow position: chr6:38454931-38454676 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 204

Conread position: 440-870
Cow position: chr6:58439530-58439954 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 144

Conread position: 441-665
Cow position: chr6:23248569-23248343 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 0

Conread position: 441-690
Cow position: chr6:50571857-50572109 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 111

Conread position: 442-881
Cow position: chr6:32916377-32915919 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 6

Conread position: 442-1116
Cow position: chr6:13366839-13367521 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 97

Conread position: 443-615
Cow position: chr6:2833521-2833357 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 443-691
Cow position: chr6:40238541-40238286 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 443-771
Cow position: chr6:9375820-9375494 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 70

Conread position: 443-1116
Cow position: chr6:143817-143139 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 34

Conread position: 444-633
Cow position: chr6:31829591-31829783 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 50

Conread position: 444-655
Cow position: chr6:66453043-66453261 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 110, 0

Conread position: 444-785
Cow position: chr6:18955491-18955139 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 444-873
Cow position: chr6:10605226-10605684 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 411

Conread position: 444-885
Cow position: chr6:44372406-44371938 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 197

Conread position: 445-656
Cow position: chr6:28107456-28107243 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 105, 25

Conread position: 445-1057
Cow position: chr6:36651967-36652602 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 199

Conread position: 445-1112
Cow position: chr6:24030918-24031598 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 155

Conread position: 445-1116
Cow position: chr6:7131304-7130622 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 156

Conread position: 446-766
Cow position: chr6:62828605-62828283 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 24

Conread position: 446-773
Cow position: chr6:2668764-2668425 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 446-782
Cow position: chr6:10865634-10865983 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 106

Conread position: 447-692
Cow position: chr6:30152561-30152801 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 47

Conread position: 448-640
Cow position: chr6:68365727-68365536 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 448-671
Cow position: chr6:24659404-24659184 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 55, 193

Conread position: 448-682
Cow position: chr6:30826513-30826271 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 11, 38

Conread position: 448-776
Cow position: chr6:19170830-19171170 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 448-779
Cow position: chr6:12515697-12516033 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 117, 91

Conread position: 448-1022
Cow position: chr6:18049481-18048883 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 455

Conread position: 449-780
Cow position: chr6:46681356-46681695 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 328

Conread position: 449-782
Cow position: chr6:67818653-67818307 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 449-880
Cow position: chr6:48169492-48169948 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 318

Conread position: 450-657
Cow position: chr6:60485236-60485432 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 157, 92

Conread position: 450-682
Cow position: chr6:67304329-67304557 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 451-782
Cow position: chr6:25095573-25095917 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 101

Conread position: 452-740
Cow position: chr6:119515-119827 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 41

Conread position: 453-807
Cow position: chr6:14932175-14931796 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 263
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 94, 0

Conread position: 453-1023
Cow position: chr6:37634348-37634940 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 54

Conread position: 454-707
Cow position: chr6:7302464-7302716 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 91, 74

Conread position: 455-658
Cow position: chr6:61842511-61842731 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 455-680
Cow position: chr6:26344396-26344620 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 134
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 90, 101

Conread position: 455-693
Cow position: chr6:3758845-3759086 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 118

Conread position: 455-693
Cow position: chr6:54979212-54979453 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 97

Conread position: 455-782
Cow position: chr6:64097098-64096758 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 457-761
Cow position: chr6:26011050-26010748 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 97, 28

Conread position: 457-780
Cow position: chr6:17935473-17935135 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 98

Conread position: 458-752
Cow position: chr6:56651963-56651659 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 96

Conread position: 458-766
Cow position: chr6:45661037-45661344 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 106, 25

Conread position: 458-777
Cow position: chr6:66566013-66566343 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 54

Conread position: 459-784
Cow position: chr6:48422108-48421766 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 0

Conread position: 461-662
Cow position: chr6:60166792-60166586 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 133

Conread position: 461-776
Cow position: chr6:29284248-29284581 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 156

Conread position: 461-777
Cow position: chr6:8599347-8599679 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 461-782
Cow position: chr6:24262826-24263160 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 91

Conread position: 461-1112
Cow position: chr6:49422189-49421561 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 126

Conread position: 461-1116
Cow position: chr6:29210059-29210716 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 345

Conread position: 462-682
Cow position: chr6:53140834-53140612 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 183

Conread position: 462-693
Cow position: chr6:51968723-51968958 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 127, 85

Conread position: 462-750
Cow position: chr6:20245644-20245943 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 462-782
Cow position: chr6:60066033-60066366 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 462-819
Cow position: chr6:1174941-1174562 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 462-819
Cow position: chr6:33895694-33895334 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 40

Conread position: 463-688
Cow position: chr6:19695103-19695331 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 463-782
Cow position: chr6:12947791-12947461 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 104

Conread position: 463-782
Cow position: chr6:47674685-47675015 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 31

Conread position: 463-790
Cow position: chr6:47773662-47773313 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 463-971
Cow position: chr6:24961728-24962238 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 90

Conread position: 463-1002
Cow position: chr6:58747772-58748342 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 173

Conread position: 463-1109
Cow position: chr6:38770864-38771503 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 127

Conread position: 464-782
Cow position: chr6:52424583-52424914 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 464-823
Cow position: chr6:6944123-6943739 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 51, 143

Conread position: 465-782
Cow position: chr6:45694574-45694904 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 87

Conread position: 465-988
Cow position: chr6:44578831-44578291 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 447

Conread position: 466-779
Cow position: chr6:16659456-16659775 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 111, 178

Conread position: 466-779
Cow position: chr6:38994083-38993751 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 0

Conread position: 466-782
Cow position: chr6:46224971-46224642 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 198, 0

Conread position: 466-782
Cow position: chr6:54202330-54202001 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 466-813
Cow position: chr6:49626919-49627287 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 197, 101

Conread position: 466-1128
Cow position: chr6:32269288-32268640 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 33

Conread position: 467-637
Cow position: chr6:28977484-28977312 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 467-710
Cow position: chr6:19429026-19429279 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 166
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 468-826
Cow position: chr6:60017640-60018009 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 36

Conread position: 469-626
Cow position: chr6:15702884-15702728 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 72

Conread position: 469-761
Cow position: chr6:33177026-33176732 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 197, 72

Conread position: 469-782
Cow position: chr6:49684999-49684673 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 84

Conread position: 470-682
Cow position: chr6:66433487-66433699 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 193, 93

Conread position: 472-782
Cow position: chr6:33863326-33863649 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 80

Conread position: 472-826
Cow position: chr6:13694019-13693641 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 79, 179

Conread position: 472-830
Cow position: chr6:10649451-10649077 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 17

Conread position: 474-767
Cow position: chr6:47848133-47847825 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 20

Conread position: 476-933
Cow position: chr6:46205594-46206067 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 15

Conread position: 478-663
Cow position: chr6:6100150-6099966 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 478-884
Cow position: chr6:31636118-31635685 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 258

Conread position: 479-613
Cow position: chr6:52026236-52026100 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 123

Conread position: 481-666
Cow position: chr6:39995528-39995347 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 49, 80

Conread position: 483-1110
Cow position: chr6:65870608-65871264 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 11

Conread position: 483-1112
Cow position: chr6:24781988-24781316 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 440

Conread position: 484-690
Cow position: chr6:64039693-64039910 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 14

Conread position: 485-672
Cow position: chr6:23891125-23891318 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 485-682
Cow position: chr6:24988396-24988202 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 485-780
Cow position: chr6:6578191-6577883 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 68

Conread position: 485-792
Cow position: chr6:53448630-53448952 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 84, 308

Conread position: 486-642
Cow position: chr6:42731937-42731781 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 67

Conread position: 486-662
Cow position: chr6:56885545-56885721 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 59, 66

Conread position: 486-772
Cow position: chr6:35180758-35180454 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 68, 108

Conread position: 486-790
Cow position: chr6:64895666-64895986 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 70, 140

Conread position: 487-711
Cow position: chr6:40774785-40774557 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 39

Conread position: 490-636
Cow position: chr6:15944112-15943960 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 490-782
Cow position: chr6:1910905-1911211 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 17, 63

Conread position: 490-782
Cow position: chr6:3157634-3157333 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 14

Conread position: 490-943
Cow position: chr6:62925412-62924935 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 127

Conread position: 491-647
Cow position: chr6:39375212-39375373 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 491-663
Cow position: chr6:46866199-46866032 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 491-675
Cow position: chr6:49694028-49694208 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 174, 86

Conread position: 491-682
Cow position: chr6:31739133-31739328 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 491-682
Cow position: chr6:43788927-43788740 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 176, 33

Conread position: 491-692
Cow position: chr6:28636439-28636235 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 165
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 68

Conread position: 491-777
Cow position: chr6:2110525-2110229 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 176, 151

Conread position: 491-777
Cow position: chr6:27942624-27942922 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 19

Conread position: 491-782
Cow position: chr6:757961-758266 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 491-782
Cow position: chr6:24237612-24237310 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 27

Conread position: 491-782
Cow position: chr6:31192738-31192433 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 62

Conread position: 491-782
Cow position: chr6:51150635-51150937 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 172, 0

Conread position: 491-809
Cow position: chr6:44906067-44906418 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 105

Conread position: 491-809
Cow position: chr6:55205851-55205521 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 13

Conread position: 491-813
Cow position: chr6:5276078-5275740 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 54, 98

Conread position: 491-831
Cow position: chr6:31081639-31081990 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 77

Conread position: 491-906
Cow position: chr6:3017026-3017472 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 296
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 347

Conread position: 491-1116
Cow position: chr6:32125656-32126291 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 312

Conread position: 491-1137
Cow position: chr6:19401458-19402106 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 8

Conread position: 491-1141
Cow position: chr6:444917-445591 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 34

Conread position: 492-1029
Cow position: chr6:35103731-35103177 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 13

Conread position: 494-657
Cow position: chr6:8542696-8542863 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 119

Conread position: 494-663
Cow position: chr6:240463-240635 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 494-663
Cow position: chr6:51581803-51581632 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 494-682
Cow position: chr6:49685152-49685338 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 153
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 0

Conread position: 494-689
Cow position: chr6:457890-457692 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 142, 119

Conread position: 494-722
Cow position: chr6:55345284-55345051 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 57, 16

Conread position: 494-777
Cow position: chr6:62323440-62323146 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 170, 0

Conread position: 494-782
Cow position: chr6:5751574-5751873 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 51, 58

Conread position: 494-782
Cow position: chr6:19843015-19843316 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 170, 0

Conread position: 494-785
Cow position: chr6:40912808-40912507 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 169, 0

Conread position: 494-820
Cow position: chr6:23003816-23003474 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 230
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 148

Conread position: 494-881
Cow position: chr6:24327549-24327137 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 234

Conread position: 494-932
Cow position: chr6:17090178-17090653 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 195

Conread position: 494-1116
Cow position: chr6:66363653-66362993 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 433

Conread position: 495-787
Cow position: chr6:34842966-34842661 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 495-803
Cow position: chr6:52216162-52215843 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 264

Conread position: 495-803
Cow position: chr6:52235653-52235334 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 264

Conread position: 496-753
Cow position: chr6:21732517-21732247 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 0

Conread position: 496-877
Cow position: chr6:41824234-41823821 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 496-1111
Cow position: chr6:49399023-49398395 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 331

Conread position: 498-663
Cow position: chr6:30473876-30474047 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 498-743
Cow position: chr6:62979652-62979394 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 177

Conread position: 498-811
Cow position: chr6:37331558-37331890 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 44

Conread position: 498-1135
Cow position: chr6:9009003-9008362 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 34

Conread position: 501-779
Cow position: chr6:48290546-48290832 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 52

Conread position: 501-782
Cow position: chr6:23426792-23427086 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 163, 0

Conread position: 501-782
Cow position: chr6:68340200-68339906 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 163, 0

Conread position: 501-1112
Cow position: chr6:56849595-56850252 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 339

Conread position: 502-693
Cow position: chr6:5367085-5366891 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 162, 0

Conread position: 502-771
Cow position: chr6:20056226-20056508 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 97

Conread position: 502-777
Cow position: chr6:14690555-14690839 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 165, 65

Conread position: 502-782
Cow position: chr6:14225593-14225300 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 162, 0

Conread position: 503-693
Cow position: chr6:7111989-7111798 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 145

Conread position: 503-932
Cow position: chr6:24652579-24652141 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 172

Conread position: 504-693
Cow position: chr6:1293663-1293470 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 159, 138

Conread position: 504-800
Cow position: chr6:1866283-1866590 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 262

Conread position: 504-1112
Cow position: chr6:67430287-67429632 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 422
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 161, 463

Conread position: 504-1116
Cow position: chr6:21004256-21004919 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 486

Conread position: 505-680
Cow position: chr6:30159440-30159622 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 505-693
Cow position: chr6:31927653-31927841 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 164, 128

Conread position: 505-782
Cow position: chr6:17364757-17364468 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 40, 48

Conread position: 505-782
Cow position: chr6:46371841-46371553 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 159, 99

Conread position: 505-900
Cow position: chr6:31879764-31879364 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 266
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 28

Conread position: 505-1002
Cow position: chr6:23117797-23117271 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 341
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 5, 406

Conread position: 506-748
Cow position: chr6:37597968-37598215 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 63

Conread position: 506-1128
Cow position: chr6:33302015-33302648 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 136

Conread position: 507-780
Cow position: chr6:11721173-11720887 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 507-782
Cow position: chr6:21719173-21718887 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 38, 46

Conread position: 508-663
Cow position: chr6:68322263-68322103 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 128

Conread position: 508-780
Cow position: chr6:4948548-4948833 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 159, 0

Conread position: 508-915
Cow position: chr6:19427050-19427492 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 509-777
Cow position: chr6:32854652-32854382 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 25

Conread position: 509-782
Cow position: chr6:126351-126065 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 36, 44

Conread position: 509-782
Cow position: chr6:37389066-37389352 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 155, 0

Conread position: 509-792
Cow position: chr6:68272514-68272224 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 154, 102

Conread position: 510-782
Cow position: chr6:27401474-27401191 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 154, 221

Conread position: 511-631
Cow position: chr6:25072120-25072239 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 511-777
Cow position: chr6:64304015-64303761 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 199, 126

Conread position: 511-780
Cow position: chr6:58031732-58032011 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 184, 0

Conread position: 511-782
Cow position: chr6:11034498-11034214 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 48

Conread position: 511-898
Cow position: chr6:59597266-59597665 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 297

Conread position: 512-679
Cow position: chr6:10253831-10253996 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 512-1066
Cow position: chr6:55688661-55689214 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 47

Conread position: 512-1126
Cow position: chr6:45690999-45690370 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 333

Conread position: 513-692
Cow position: chr6:33855428-33855607 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 513-693
Cow position: chr6:26915994-26916177 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 151, 0

Conread position: 513-782
Cow position: chr6:9741926-9742208 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 151, 0

Conread position: 513-1126
Cow position: chr6:6060946-6060323 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 295

Conread position: 514-663
Cow position: chr6:31048937-31048788 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 73, 53

Conread position: 514-680
Cow position: chr6:16288844-16288679 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 53

Conread position: 514-779
Cow position: chr6:8207735-8207458 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 31, 39

Conread position: 514-782
Cow position: chr6:17352241-17351960 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 31, 39

Conread position: 514-1060
Cow position: chr6:24004153-24004720 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 232

Conread position: 515-699
Cow position: chr6:20170753-20170943 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 515-711
Cow position: chr6:46860585-46860388 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 160, 0

Conread position: 515-780
Cow position: chr6:53052342-53052620 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 37

Conread position: 515-782
Cow position: chr6:65041219-65040939 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 38

Conread position: 515-803
Cow position: chr6:11789009-11789322 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 305

Conread position: 515-809
Cow position: chr6:37390622-37390947 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 515-819
Cow position: chr6:40450388-40450700 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 148, 34

Conread position: 515-985
Cow position: chr6:6642972-6642501 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 60

Conread position: 516-777
Cow position: chr6:5944687-5944413 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 151, 0

Conread position: 516-782
Cow position: chr6:45130308-45130030 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 9

Conread position: 516-782
Cow position: chr6:62038159-62038434 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 178, 150

Conread position: 516-902
Cow position: chr6:13592337-13592731 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 59

Conread position: 516-1029
Cow position: chr6:16706624-16707163 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 517-785
Cow position: chr6:68252399-68252680 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 518-681
Cow position: chr6:32300943-32300777 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 35

Conread position: 518-792
Cow position: chr6:40320311-40320584 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 107, 128

Conread position: 519-777
Cow position: chr6:61257630-61257897 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 34

Conread position: 519-782
Cow position: chr6:64338005-64337729 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 34

Conread position: 519-1055
Cow position: chr6:25407787-25407215 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 49

Conread position: 520-782
Cow position: chr6:14631207-14631484 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 144, 0

Conread position: 521-691
Cow position: chr6:64314376-64314201 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 521-792
Cow position: chr6:65874335-65874053 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 146, 71

Conread position: 521-1054
Cow position: chr6:14958723-14958161 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 87

Conread position: 522-680
Cow position: chr6:14897138-14896983 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 522-1015
Cow position: chr6:180743-180229 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 336
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 150, 388

Conread position: 523-658
Cow position: chr6:51525967-51525832 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 524-777
Cow position: chr6:4164769-4164511 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 168, 18

Conread position: 524-780
Cow position: chr6:42416465-42416728 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 64

Conread position: 526-645
Cow position: chr6:21184184-21184303 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 526-684
Cow position: chr6:53553118-53553278 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 137, 11

Conread position: 526-693
Cow position: chr6:52209293-52209461 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 137, 7

Conread position: 526-782
Cow position: chr6:62331293-62331027 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 136, 171

Conread position: 526-1015
Cow position: chr6:47383626-47384143 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 90

Conread position: 526-1112
Cow position: chr6:55610614-55609993 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 311

Conread position: 527-970
Cow position: chr6:8804918-8804439 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 319

Conread position: 527-1020
Cow position: chr6:55594019-55594531 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 341
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 34

Conread position: 528-693
Cow position: chr6:14133583-14133752 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 528-782
Cow position: chr6:14891206-14890939 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 25

Conread position: 529-693
Cow position: chr6:22921014-22921181 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 134, 0

Conread position: 529-792
Cow position: chr6:37487675-37487402 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 134, 54

Conread position: 529-814
Cow position: chr6:1264236-1264523 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 138, 180

Conread position: 530-932
Cow position: chr6:52248494-52248079 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 306
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 137, 53

Conread position: 531-692
Cow position: chr6:5462646-5462486 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 134, 85

Conread position: 532-777
Cow position: chr6:16492276-16492032 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 163, 55

Conread position: 532-783
Cow position: chr6:33147693-33147953 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 162, 36

Conread position: 533-1126
Cow position: chr6:18080885-18080267 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 389

Conread position: 536-1119
Cow position: chr6:52431399-52430777 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 379

Conread position: 542-656
Cow position: chr6:51398073-51398186 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 543-680
Cow position: chr6:22863779-22863643 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 130, 30

Conread position: 544-818
Cow position: chr6:54806864-54807163 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 545-1029
Cow position: chr6:67968988-67968461 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 358
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 91, 300

Conread position: 545-1132
Cow position: chr6:323667-323047 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 370

Conread position: 547-690
Cow position: chr6:54164253-54164106 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 128

Conread position: 547-820
Cow position: chr6:16397537-16397245 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 547-887
Cow position: chr6:40264542-40264190 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 123, 51

Conread position: 547-992
Cow position: chr6:54140469-54140911 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 18

Conread position: 547-1123
Cow position: chr6:24902491-24901909 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 33

Conread position: 548-780
Cow position: chr6:50423753-50423514 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 115, 10

Conread position: 548-838
Cow position: chr6:62592914-62592598 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 125, 0

Conread position: 548-975
Cow position: chr6:1944376-1944810 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 266

Conread position: 550-691
Cow position: chr6:16230545-16230680 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 550-1096
Cow position: chr6:35842309-35842879 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 216

Conread position: 550-1135
Cow position: chr6:26728878-26728282 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 49

Conread position: 551-692
Cow position: chr6:34608886-34608741 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 551-693
Cow position: chr6:47150064-47150210 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 37

Conread position: 551-777
Cow position: chr6:875676-875436 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 27, 42

Conread position: 551-777
Cow position: chr6:54447785-54447540 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 551-780
Cow position: chr6:1957122-1956880 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 551-780
Cow position: chr6:38053538-38053780 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 551-780
Cow position: chr6:43604420-43604662 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chr6:596087-595843 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chr6:13605580-13605336 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chr6:13619822-13619578 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chr6:15882025-15881781 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chr6:19737326-19737570 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 551-782
Cow position: chr6:27939576-27939820 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chr6:39797930-39797686 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chr6:40710174-40710418 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chr6:45210943-45211187 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chr6:55582348-55582104 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 551-823
Cow position: chr6:54963721-54963436 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 116, 158

Conread position: 551-879
Cow position: chr6:12927772-12928121 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 108

Conread position: 551-959
Cow position: chr6:62851630-62851195 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 284
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 138

Conread position: 551-1097
Cow position: chr6:41162052-41161477 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 367
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 112, 369

Conread position: 551-1112
Cow position: chr6:61268984-61269552 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 111

Conread position: 551-1145
Cow position: chr6:31535907-31535304 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 395
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 139, 36

Conread position: 552-679
Cow position: chr6:7157104-7157234 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 552-780
Cow position: chr6:43389715-43389954 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 552-830
Cow position: chr6:6569771-6570069 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 552-918
Cow position: chr6:20231170-20230787 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 8

Conread position: 553-782
Cow position: chr6:68871128-68870886 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 553-824
Cow position: chr6:68297930-68297639 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 99

Conread position: 553-844
Cow position: chr6:55608155-55607850 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 245

Conread position: 553-1113
Cow position: chr6:55474901-55475487 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 434

Conread position: 554-663
Cow position: chr6:44623122-44623013 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 96
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-680
Cow position: chr6:55366746-55366617 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 554-693
Cow position: chr6:21608149-21608285 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 119, 13

Conread position: 554-726
Cow position: chr6:58761745-58761920 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 554-775
Cow position: chr6:52900815-52901036 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 138

Conread position: 554-780
Cow position: chr6:57796245-57796006 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 554-813
Cow position: chr6:14706759-14706485 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 7

Conread position: 554-813
Cow position: chr6:48468454-48468736 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 554-818
Cow position: chr6:2640470-2640179 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 280

Conread position: 554-824
Cow position: chr6:57685812-57686099 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 111, 21

Conread position: 554-827
Cow position: chr6:51071356-51071658 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 109, 212

Conread position: 554-830
Cow position: chr6:12844962-12845259 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 213

Conread position: 554-885
Cow position: chr6:8318513-8318155 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 104, 0

Conread position: 554-885
Cow position: chr6:29113008-29112669 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 121, 115

Conread position: 554-885
Cow position: chr6:59577001-59577361 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 126

Conread position: 554-900
Cow position: chr6:45596872-45596514 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 99, 137

Conread position: 554-1034
Cow position: chr6:63047229-63047748 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 72

Conread position: 554-1035
Cow position: chr6:35990574-35990077 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 25

Conread position: 554-1104
Cow position: chr6:15305241-15305798 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 261

Conread position: 554-1105
Cow position: chr6:10106348-10105755 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 108

Conread position: 554-1127
Cow position: chr6:47304980-47305590 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 364

Conread position: 555-663
Cow position: chr6:55282698-55282590 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-778
Cow position: chr6:452284-452521 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 555-779
Cow position: chr6:33897573-33897343 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 109, 0

Conread position: 555-782
Cow position: chr6:10107303-10107542 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 109, 49

Conread position: 555-782
Cow position: chr6:10536136-10535896 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 555-782
Cow position: chr6:26925737-26925498 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 109, 0

Conread position: 555-793
Cow position: chr6:24649508-24649753 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 14

Conread position: 555-1138
Cow position: chr6:2546897-2547516 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 38

Conread position: 556-996
Cow position: chr6:456835-457293 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 55

Conread position: 557-1015
Cow position: chr6:58605937-58606421 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 319
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 106, 209

Conread position: 558-782
Cow position: chr6:41033719-41033956 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 559-792
Cow position: chr6:17871055-17871300 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 112, 233

Conread position: 560-693
Cow position: chr6:35260506-35260642 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 560-1053
Cow position: chr6:66532144-66531647 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 211

Conread position: 560-1112
Cow position: chr6:15242511-15243074 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 83

Conread position: 562-782
Cow position: chr6:68663251-68663016 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 562-823
Cow position: chr6:59828953-59829207 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 45

Conread position: 562-1052
Cow position: chr6:54867179-54867691 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 562-1112
Cow position: chr6:36195874-36196437 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 262

Conread position: 563-822
Cow position: chr6:16634548-16634279 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 100, 83

Conread position: 564-663
Cow position: chr6:60108350-60108251 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-693
Cow position: chr6:1228961-1228828 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 564-1015
Cow position: chr6:54980764-54981246 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 319
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 98, 354

Conread position: 567-1069
Cow position: chr6:28482679-28483205 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 340

Conread position: 567-1116
Cow position: chr6:44078182-44078754 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 33

Conread position: 567-1116
Cow position: chr6:68376623-68376076 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 365
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 33, 90

Conread position: 568-782
Cow position: chr6:32054868-32054645 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 98

Conread position: 568-782
Cow position: chr6:37217434-37217661 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 568-819
Cow position: chr6:5672896-5673162 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 98, 64

Conread position: 569-721
Cow position: chr6:37148489-37148646 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 570-767
Cow position: chr6:42693031-42693239 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 570-775
Cow position: chr6:26837716-26837505 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 66

Conread position: 570-780
Cow position: chr6:48794337-48794113 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 30

Conread position: 570-809
Cow position: chr6:60152704-60152963 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 570-945
Cow position: chr6:28148512-28148902 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 16, 245

Conread position: 570-1116
Cow position: chr6:10176630-10176060 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 342

Conread position: 571-779
Cow position: chr6:7216501-7216720 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 571-782
Cow position: chr6:34111265-34111041 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 571-782
Cow position: chr6:43404259-43404483 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 571-964
Cow position: chr6:58589705-58590108 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 174

Conread position: 576-828
Cow position: chr6:12934465-12934194 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 76

Conread position: 576-1034
Cow position: chr6:19681842-19681369 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 97

Conread position: 577-693
Cow position: chr6:62808834-62808953 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 577-888
Cow position: chr6:50446084-50445749 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 144

Conread position: 577-1004
Cow position: chr6:10459413-10459868 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 294
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 49

Conread position: 578-782
Cow position: chr6:38776277-38776494 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 578-793
Cow position: chr6:12116374-12116151 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 91, 26

Conread position: 578-826
Cow position: chr6:3936223-3936484 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 240

Conread position: 578-925
Cow position: chr6:561296-561669 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 94, 329

Conread position: 579-1137
Cow position: chr6:12337662-12338250 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 419

Conread position: 581-885
Cow position: chr6:20255701-20255391 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 72

Conread position: 583-693
Cow position: chr6:21302300-21302410 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 583-831
Cow position: chr6:57597318-57597045 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 185

Conread position: 584-780
Cow position: chr6:28276342-28276551 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 584-787
Cow position: chr6:1538486-1538694 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 585-777
Cow position: chr6:43014498-43014295 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 124

Conread position: 585-884
Cow position: chr6:47625275-47624956 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 78, 25

Conread position: 585-1135
Cow position: chr6:60859620-60859040 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 322

Conread position: 587-699
Cow position: chr6:37468429-37468314 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 588-766
Cow position: chr6:13345227-13345038 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 588-782
Cow position: chr6:36299492-36299285 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 588-788
Cow position: chr6:6117870-6117653 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 71, 205

Conread position: 588-824
Cow position: chr6:30285375-30285623 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 219

Conread position: 588-881
Cow position: chr6:12500543-12500862 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 286

Conread position: 589-693
Cow position: chr6:50042793-50042900 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 590-693
Cow position: chr6:50527774-50527668 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 590-780
Cow position: chr6:12389787-12389986 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 591-1116
Cow position: chr6:46557747-46558293 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 463

Conread position: 592-762
Cow position: chr6:1104358-1104178 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 44

Conread position: 592-777
Cow position: chr6:68127144-68127342 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 592-820
Cow position: chr6:60467718-60467961 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 68, 228

Conread position: 592-1108
Cow position: chr6:21587731-21587203 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 284

Conread position: 592-1116
Cow position: chr6:21534753-21535279 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 16

Conread position: 594-693
Cow position: chr6:56596967-56597069 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 594-1111
Cow position: chr6:611260-611777 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 9

Conread position: 595-859
Cow position: chr6:19508737-19508461 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 80, 8

Conread position: 597-692
Cow position: chr6:20329454-20329548 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 597-693
Cow position: chr6:7010414-7010318 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 597-779
Cow position: chr6:58315742-58315934 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 597-806
Cow position: chr6:67044666-67044881 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 70, 35

Conread position: 600-695
Cow position: chr6:24109780-24109875 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 600-779
Cow position: chr6:21300823-21300631 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 600-1015
Cow position: chr6:55956406-55955974 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 279
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 89

Conread position: 600-1022
Cow position: chr6:31525750-31526190 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 184

Conread position: 601-848
Cow position: chr6:5329854-5330116 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 601-940
Cow position: chr6:47150477-47150852 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 7, 30

Conread position: 602-1004
Cow position: chr6:53401071-53401482 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 167

Conread position: 602-1140
Cow position: chr6:47519751-47520319 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 232

Conread position: 603-832
Cow position: chr6:17248434-17248684 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 11

Conread position: 603-1035
Cow position: chr6:60057964-60057502 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 319

Conread position: 604-914
Cow position: chr6:58172890-58173220 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 85, 122

Conread position: 605-1017
Cow position: chr6:63272914-63272473 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 305
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 58, 252

Conread position: 608-1127
Cow position: chr6:61489053-61489570 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 357
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 41

Conread position: 609-845
Cow position: chr6:34235728-34235471 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 216

Conread position: 610-999
Cow position: chr6:54369188-54368783 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 292

Conread position: 611-945
Cow position: chr6:14850997-14850647 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 75

Conread position: 612-777
Cow position: chr6:26696897-26696722 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 613-933
Cow position: chr6:62479454-62479106 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 613-996
Cow position: chr6:19330043-19329649 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 82, 246

Conread position: 615-1157
Cow position: chr6:6201161-6201710 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 238

Conread position: 616-835
Cow position: chr6:69500044-69500276 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 131

Conread position: 616-1028
Cow position: chr6:57164141-57164575 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 303
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 109

Conread position: 616-1068
Cow position: chr6:38218378-38218857 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 53, 210

Conread position: 617-761
Cow position: chr6:51387481-51387632 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 619-1125
Cow position: chr6:6264363-6264898 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 201

Conread position: 620-1116
Cow position: chr6:61515481-61514959 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 306

Conread position: 621-817
Cow position: chr6:32024618-32024401 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 19

Conread position: 622-1143
Cow position: chr6:22332678-22332130 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 369
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 207

Conread position: 625-785
Cow position: chr6:60274500-60274329 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 625-793
Cow position: chr6:3591849-3592022 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 150

Conread position: 626-885
Cow position: chr6:32337134-32337395 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 91

Conread position: 627-1051
Cow position: chr6:42961642-42961191 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 306
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 248

Conread position: 627-1123
Cow position: chr6:60473859-60474381 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 222

Conread position: 627-1137
Cow position: chr6:50746702-50747263 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 629-1142
Cow position: chr6:54365596-54365061 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 94

Conread position: 630-1148
Cow position: chr6:48281723-48282261 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 230

Conread position: 633-1047
Cow position: chr6:35471795-35471341 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 313
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 198

Conread position: 637-835
Cow position: chr6:35769747-35769530 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 187

Conread position: 637-1068
Cow position: chr6:40713763-40713322 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 310
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 14

Conread position: 643-860
Cow position: chr6:64449133-64449372 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 96

Conread position: 646-1000
Cow position: chr6:49002977-49002618 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 249

Conread position: 649-929
Cow position: chr6:32335567-32335851 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 75

Conread position: 649-1157
Cow position: chr6:3952272-3952803 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 169

Conread position: 654-973
Cow position: chr6:130409-130068 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 170

Conread position: 654-1110
Cow position: chr6:54132571-54133045 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 333
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 168

Conread position: 660-1023
Cow position: chr6:60350537-60350147 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 265
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 11

Conread position: 660-1028
Cow position: chr6:8788270-8787887 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 260
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 42, 11

Conread position: 660-1105
Cow position: chr6:67950721-67951185 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 661-826
Cow position: chr6:17068057-17067875 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 661-1016
Cow position: chr6:54600130-54600486 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 108

Conread position: 662-844
Cow position: chr6:1002471-1002271 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 160

Conread position: 662-1021
Cow position: chr6:20098201-20097816 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 159

Conread position: 662-1036
Cow position: chr6:54991229-54990843 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 107, 44

Conread position: 662-1087
Cow position: chr6:26915093-26915538 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 306
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 35, 159

Conread position: 662-1112
Cow position: chr6:38853895-38853421 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 332
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 34, 174

Conread position: 662-1115
Cow position: chr6:61113513-61114003 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 329
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 34, 445

Conread position: 662-1116
Cow position: chr6:65676020-65676483 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 31, 184

Conread position: 662-1119
Cow position: chr6:34251512-34251056 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 321
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 62

Conread position: 665-946
Cow position: chr6:21542085-21542391 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 6, 157

Conread position: 665-1117
Cow position: chr6:4383260-4383713 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 6

Conread position: 666-925
Cow position: chr6:53710885-53711161 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 153

Conread position: 666-933
Cow position: chr6:54885146-54884851 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 281

Conread position: 670-1126
Cow position: chr6:9736868-9736394 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 323
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 29, 126

Conread position: 670-1135
Cow position: chr6:34475772-34475299 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 327
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 66

Conread position: 671-945
Cow position: chr6:68049208-68049498 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 25, 200

Conread position: 671-1116
Cow position: chr6:24468620-24468160 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 330
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 69

Conread position: 671-1127
Cow position: chr6:60144405-60143945 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 318
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 97

Conread position: 672-823
Cow position: chr6:22986214-22986049 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 137

Conread position: 672-933
Cow position: chr6:67304575-67304859 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 181

Conread position: 672-939
Cow position: chr6:49685358-49685645 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 251

Conread position: 674-874
Cow position: chr6:53139151-53138924 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 674-945
Cow position: chr6:60239613-60239328 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 199

Conread position: 674-1111
Cow position: chr6:46865810-46865351 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 312
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 5

Conread position: 675-830
Cow position: chr6:51398577-51398749 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 675-881
Cow position: chr6:388947-389178 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 65

Conread position: 675-884
Cow position: chr6:45160515-45160287 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 143

Conread position: 676-1058
Cow position: chr6:16191453-16191849 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 19

Conread position: 676-1117
Cow position: chr6:46860390-46859931 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 309
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 148

Conread position: 680-892
Cow position: chr6:36011481-36011695 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 163

Conread position: 680-1002
Cow position: chr6:899503-899169 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 33

Conread position: 683-1068
Cow position: chr6:52412645-52413049 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 216

Conread position: 690-930
Cow position: chr6:415894-416157 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 16

Conread position: 690-1053
Cow position: chr6:37199747-37199365 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 277

Conread position: 693-1031
Cow position: chr6:51893705-51893348 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 220

Conread position: 695-1036
Cow position: chr6:53651844-53652198 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 121

Conread position: 696-826
Cow position: chr6:21184760-21184901 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 120

Conread position: 696-830
Cow position: chr6:59302021-59301873 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 696-835
Cow position: chr6:89104-88952 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 122

Conread position: 696-835
Cow position: chr6:21812534-21812683 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 696-860
Cow position: chr6:21110774-21110945 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 95

Conread position: 696-875
Cow position: chr6:39994657-39994463 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 122

Conread position: 696-876
Cow position: chr6:66453605-66453798 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 67

Conread position: 696-881
Cow position: chr6:242618-242814 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 65

Conread position: 696-884
Cow position: chr6:30786344-30786148 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 112

Conread position: 696-885
Cow position: chr6:31564531-31564331 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 114

Conread position: 696-885
Cow position: chr6:56041818-56041617 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 115

Conread position: 696-907
Cow position: chr6:24515389-24515168 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 48

Conread position: 696-932
Cow position: chr6:53731325-53731577 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 210

Conread position: 696-933
Cow position: chr6:25773577-25773331 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 144

Conread position: 696-942
Cow position: chr6:34031472-34031723 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 65

Conread position: 696-945
Cow position: chr6:38614628-38614886 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 18, 111

Conread position: 696-971
Cow position: chr6:57405320-57405032 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 119

Conread position: 696-1003
Cow position: chr6:23248159-23247841 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 18, 131

Conread position: 696-1029
Cow position: chr6:66874166-66874500 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 18, 59

Conread position: 696-1034
Cow position: chr6:28977225-28976884 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 112

Conread position: 696-1039
Cow position: chr6:8965894-8966258 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 18, 11

Conread position: 696-1039
Cow position: chr6:66131112-66131465 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 65

Conread position: 696-1051
Cow position: chr6:21869841-21869476 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 115

Conread position: 696-1054
Cow position: chr6:67456507-67456894 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 224

Conread position: 696-1055
Cow position: chr6:16423503-16423883 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 119

Conread position: 696-1068
Cow position: chr6:38641302-38641681 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 114

Conread position: 696-1068
Cow position: chr6:40774544-40774148 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 267
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 114

Conread position: 696-1103
Cow position: chr6:5114243-5113821 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 287
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 120

Conread position: 696-1104
Cow position: chr6:41733431-41733862 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 224

Conread position: 696-1112
Cow position: chr6:10400091-10399673 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 288
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 140

Conread position: 696-1112
Cow position: chr6:16103398-16102956 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 299
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 211

Conread position: 696-1112
Cow position: chr6:17997511-17997082 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 201

Conread position: 696-1113
Cow position: chr6:23532467-23532882 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 295
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 119

Conread position: 696-1113
Cow position: chr6:29239748-29240168 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 201

Conread position: 696-1116
Cow position: chr6:53024994-53024572 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 133

Conread position: 696-1126
Cow position: chr6:44194741-44194305 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 309
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 18, 130

Conread position: 696-1127
Cow position: chr6:7190315-7189879 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 309
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 18, 108

Conread position: 696-1127
Cow position: chr6:50090444-50090895 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 294
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 152

Conread position: 696-1137
Cow position: chr6:6063475-6063032 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 299
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 19, 80

Conread position: 696-1137
Cow position: chr6:21231340-21231772 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 301
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 18, 113

Conread position: 696-1138
Cow position: chr6:51581454-51580992 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 312
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 19, 132

Conread position: 696-1141
Cow position: chr6:7539378-7539836 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 108

Conread position: 696-1141
Cow position: chr6:36202632-36203081 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 16, 118

Conread position: 696-1148
Cow position: chr6:5609636-5609170 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 117

Conread position: 696-1148
Cow position: chr6:59015757-59015309 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 309
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 138

Conread position: 696-1156
Cow position: chr6:14949677-14949213 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 322
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 195

Conread position: 697-847
Cow position: chr6:10635981-10636136 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 64

Conread position: 697-854
Cow position: chr6:46245518-46245343 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 697-883
Cow position: chr6:46400601-46400406 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 188

Conread position: 697-1021
Cow position: chr6:7989608-7989274 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 230
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 23

Conread position: 697-1036
Cow position: chr6:60442223-60442565 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 17, 205

Conread position: 697-1045
Cow position: chr6:6098477-6098099 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 18, 115

Conread position: 697-1055
Cow position: chr6:54864862-54864483 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 277

Conread position: 697-1068
Cow position: chr6:45606644-45606267 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 246
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 140, 70

Conread position: 697-1068
Cow position: chr6:48187776-48187390 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 17, 194

Conread position: 697-1085
Cow position: chr6:63921788-63922186 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 264
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 7, 78

Conread position: 697-1100
Cow position: chr6:19695611-19696032 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 109

Conread position: 697-1101
Cow position: chr6:63720004-63720416 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 281
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 17, 113

Conread position: 697-1104
Cow position: chr6:58732509-58732073 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 287
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 215

Conread position: 697-1105
Cow position: chr6:38207691-38207258 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 131

Conread position: 697-1108
Cow position: chr6:12092179-12091755 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 92

Conread position: 697-1116
Cow position: chr6:66433753-66434193 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 144

Conread position: 697-1124
Cow position: chr6:54430624-54431083 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 316

Conread position: 697-1124
Cow position: chr6:59620474-59620903 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 301
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 17, 177

Conread position: 697-1126
Cow position: chr6:53460767-53460323 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 306
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 117

Conread position: 697-1127
Cow position: chr6:15301012-15300590 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 167

Conread position: 697-1127
Cow position: chr6:38440987-38441430 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 303
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 17, 97

Conread position: 697-1128
Cow position: chr6:21456885-21456427 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 308
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 119

Conread position: 697-1138
Cow position: chr6:37467734-37467275 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 142

Conread position: 697-1149
Cow position: chr6:65702596-65702138 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 322
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 150

Conread position: 697-1154
Cow position: chr6:6400753-6401242 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 339
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 17, 120

Conread position: 698-881
Cow position: chr6:15923193-15922995 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 116

Conread position: 698-925
Cow position: chr6:18968965-18968734 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 15

Conread position: 698-936
Cow position: chr6:52025848-52025593 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 0

Conread position: 698-1029
Cow position: chr6:528472-528133 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 122

Conread position: 698-1048
Cow position: chr6:59069822-59069450 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 120

Conread position: 698-1127
Cow position: chr6:55546355-55545922 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 296
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 8, 24

Conread position: 698-1147
Cow position: chr6:20157130-20157606 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 314
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 16, 380

Conread position: 698-1148
Cow position: chr6:35435810-35436255 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 304
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 96

Conread position: 699-884
Cow position: chr6:5462242-5462053 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 62

Conread position: 699-929
Cow position: chr6:48425514-48425274 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 193

Conread position: 699-1011
Cow position: chr6:28318216-28318529 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 110

Conread position: 699-1110
Cow position: chr6:21062076-21061658 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 283
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 64

Conread position: 699-1112
Cow position: chr6:65903810-65903391 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 269
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 139

Conread position: 699-1124
Cow position: chr6:24110111-24110531 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 73

Conread position: 699-1157
Cow position: chr6:53519816-53519343 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 321
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 15, 203

Conread position: 700-819
Cow position: chr6:17220646-17220520 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 700-830
Cow position: chr6:37603331-37603470 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 123

Conread position: 700-1112
Cow position: chr6:37149002-37149417 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 86

Conread position: 701-1116
Cow position: chr6:47355633-47356065 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 112

Conread position: 704-1035
Cow position: chr6:65259655-65259336 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 13, 39

Conread position: 704-1053
Cow position: chr6:47799110-47799468 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 10, 50

Conread position: 708-898
Cow position: chr6:25008530-25008730 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 6, 102

Conread position: 714-932
Cow position: chr6:61137194-61137428 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 104

Conread position: 715-1049
Cow position: chr6:32518049-32517710 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 110

Conread position: 715-1085
Cow position: chr6:19012893-19013271 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 224
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 233

Conread position: 716-940
Cow position: chr6:9838987-9839232 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 241

Conread position: 716-1087
Cow position: chr6:8125157-8125539 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 128

Conread position: 716-1119
Cow position: chr6:59798493-59798891 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 116, 52

Conread position: 716-1127
Cow position: chr6:59104433-59104854 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 285
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 77

Conread position: 716-1137
Cow position: chr6:44566237-44566687 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 290
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 252

Conread position: 717-1054
Cow position: chr6:35993403-35993759 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 48, 212

Conread position: 717-1116
Cow position: chr6:60819341-60819754 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 292
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 173

Conread position: 718-1119
Cow position: chr6:12668934-12669340 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 169

Conread position: 718-1124
Cow position: chr6:65264708-65264304 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 176

Conread position: 719-1068
Cow position: chr6:17334229-17333863 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 171

Conread position: 720-929
Cow position: chr6:54287909-54288121 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 163

Conread position: 720-1124
Cow position: chr6:27888179-27888590 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 288
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 10

Conread position: 721-1127
Cow position: chr6:15447378-15446942 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 48, 107

Conread position: 722-1122
Cow position: chr6:11246595-11247015 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 89

Conread position: 723-1110
Cow position: chr6:19446092-19446486 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 279
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 43, 99

Conread position: 724-1019
Cow position: chr6:47640604-47640291 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 93

Conread position: 724-1054
Cow position: chr6:16764809-16764470 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 108, 57

Conread position: 727-930
Cow position: chr6:44984162-44984381 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 174

Conread position: 727-1149
Cow position: chr6:60783706-60784141 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 294
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 121

Conread position: 728-1121
Cow position: chr6:15243088-15243505 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 287
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 28, 99

Conread position: 728-1164
Cow position: chr6:14914402-14913953 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 207

Conread position: 729-940
Cow position: chr6:12543095-12542868 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 84

Conread position: 731-1116
Cow position: chr6:57546376-57545990 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 32, 64

Conread position: 732-1067
Cow position: chr6:48112045-48112382 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 76

Conread position: 732-1114
Cow position: chr6:54036294-54035903 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 256
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 33, 91

Conread position: 732-1115
Cow position: chr6:3595634-3596032 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 265
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 55

Conread position: 735-1047
Cow position: chr6:582424-582104 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 12, 76

Conread position: 735-1107
Cow position: chr6:60739859-60740240 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 170

Conread position: 735-1127
Cow position: chr6:50984068-50984472 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 34, 154

Conread position: 735-1136
Cow position: chr6:3464128-3464550 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 273
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 263

Conread position: 736-1067
Cow position: chr6:67323161-67323492 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 25, 117

Conread position: 736-1106
Cow position: chr6:19755232-19754849 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 260
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 82

Conread position: 736-1126
Cow position: chr6:7128555-7128155 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 270
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 93

Conread position: 737-1158
Cow position: chr6:19292658-19293081 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 284
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 27, 45

Conread position: 738-1121
Cow position: chr6:4692137-4691720 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 280

Conread position: 739-1112
Cow position: chr6:19264652-19264266 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 268
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 79

Conread position: 740-1128
Cow position: chr6:67574256-67574641 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 25, 72

Conread position: 742-1116
Cow position: chr6:9219124-9219502 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 258
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 84

Conread position: 743-1112
Cow position: chr6:46283146-46282757 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 259
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 79

Conread position: 744-1066
Cow position: chr6:57571326-57571663 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 84

Conread position: 744-1128
Cow position: chr6:17817132-17816743 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 257
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 55

Conread position: 748-1142
Cow position: chr6:62669735-62670135 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 57

Conread position: 754-1047
Cow position: chr6:16316178-16316485 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 8

Conread position: 754-1113
Cow position: chr6:38640099-38640467 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 8

Conread position: 754-1125
Cow position: chr6:48988305-48988682 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 8

Conread position: 754-1128
Cow position: chr6:45388198-45388572 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 255
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 8

Conread position: 754-1137
Cow position: chr6:48010653-48010264 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 255
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 8

Conread position: 755-1137
Cow position: chr6:30123323-30122907 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 276
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 5

Conread position: 758-1127
Cow position: chr6:19045498-19045879 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 142

Conread position: 760-1105
Cow position: chr6:43135071-43134713 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 86

Conread position: 760-1120
Cow position: chr6:38609841-38610216 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 134

Conread position: 760-1127
Cow position: chr6:4559430-4559053 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 126

Conread position: 761-1148
Cow position: chr6:23402115-23401723 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 264
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 49

Conread position: 765-1068
Cow position: chr6:36189575-36189887 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 136

Conread position: 765-1116
Cow position: chr6:50467013-50467377 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 25, 106

Conread position: 765-1127
Cow position: chr6:17313612-17313989 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 22, 45

Conread position: 768-1104
Cow position: chr6:16261667-16262008 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 117

Conread position: 768-1126
Cow position: chr6:25615221-25614841 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 125

Conread position: 770-1127
Cow position: chr6:62371293-62370937 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 117

Conread position: 774-1134
Cow position: chr6:60118042-60118398 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 7

Conread position: 777-1126
Cow position: chr6:53841604-53841255 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 85, 37

Conread position: 778-1127
Cow position: chr6:58370649-58370997 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 162

Conread position: 779-1064
Cow position: chr6:21514722-21514422 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 779-1119
Cow position: chr6:22850348-22850010 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 58, 79

Conread position: 779-1124
Cow position: chr6:21399856-21399507 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 79

Conread position: 779-1128
Cow position: chr6:59603310-59602964 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 36

Conread position: 779-1133
Cow position: chr6:7119713-7119376 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 37

Conread position: 779-1146
Cow position: chr6:43345549-43345171 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 120

Conread position: 782-1060
Cow position: chr6:3592301-3592579 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 159

Conread position: 783-1068
Cow position: chr6:17794855-17794572 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 79, 43

Conread position: 783-1116
Cow position: chr6:10039622-10039965 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 99

Conread position: 783-1143
Cow position: chr6:54854150-54854515 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 243
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 48

Conread position: 784-1097
Cow position: chr6:9719021-9718697 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 5

Conread position: 784-1124
Cow position: chr6:54208237-54207885 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 15

Conread position: 786-1116
Cow position: chr6:21234948-21235286 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 28

Conread position: 787-1124
Cow position: chr6:44867636-44867301 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 34

Conread position: 788-1137
Cow position: chr6:62929402-62929759 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 51

Conread position: 800-1159
Cow position: chr6:26155074-26155421 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 50

Conread position: 801-1107
Cow position: chr6:22525250-22525555 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 92

Conread position: 803-1128
Cow position: chr6:22985937-22985614 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 12

Conread position: 805-1113
Cow position: chr6:41375693-41376005 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 9

Conread position: 805-1127
Cow position: chr6:5330337-5330663 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 805-1144
Cow position: chr6:33509712-33510057 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 83

Conread position: 805-1147
Cow position: chr6:24536618-24536257 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 14

Conread position: 806-1078
Cow position: chr6:2153668-2153395 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 14

Conread position: 806-1125
Cow position: chr6:8599926-8600255 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 78

Conread position: 807-1099
Cow position: chr6:55205388-55205085 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 83

Conread position: 807-1143
Cow position: chr6:37395483-37395134 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 9

Conread position: 809-1128
Cow position: chr6:62437342-62437667 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 209
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 313

Conread position: 814-1105
Cow position: chr6:18118121-18117823 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 156

Conread position: 814-1123
Cow position: chr6:32043783-32044096 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 49

Conread position: 814-1133
Cow position: chr6:24339215-24339545 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 100

Conread position: 815-1087
Cow position: chr6:67643759-67643479 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 95

Conread position: 815-1148
Cow position: chr6:694215-693872 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 230
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 73

Conread position: 820-1124
Cow position: chr6:5845235-5844921 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 63

Conread position: 826-1125
Cow position: chr6:55417581-55417285 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 60

Conread position: 839-1105
Cow position: chr6:56986686-56986420 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 47

Conread position: 839-1127
Cow position: chr6:2078861-2078567 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 199

Conread position: 839-1127
Cow position: chr6:51530227-51529938 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 48

Conread position: 839-1138
Cow position: chr6:3350978-3351290 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 239

Conread position: 842-1143
Cow position: chr6:94228-93934 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 35

Conread position: 843-1103
Cow position: chr6:2584904-2585167 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 51

Conread position: 843-1103
Cow position: chr6:68816129-68816396 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 47

Conread position: 843-1137
Cow position: chr6:67728333-67728636 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 44

Conread position: 853-1154
Cow position: chr6:50862916-50863223 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 272

Conread position: 855-1127
Cow position: chr6:35319158-35318884 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 57

Conread position: 858-1127
Cow position: chr6:35727822-35728098 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 12

Conread position: 859-1068
Cow position: chr6:55502747-55502960 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 26

Conread position: 859-1116
Cow position: chr6:23025131-23024859 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 859-1116
Cow position: chr6:47958794-47959044 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 78

Conread position: 859-1123
Cow position: chr6:41014995-41014726 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 76, 18

Conread position: 859-1123
Cow position: chr6:42567473-42567741 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 18

Conread position: 859-1126
Cow position: chr6:36809226-36808953 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 51

Conread position: 859-1126
Cow position: chr6:57089178-57089453 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 76, 178

Conread position: 859-1127
Cow position: chr6:53145701-53145430 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 51

Conread position: 859-1128
Cow position: chr6:12964834-12965105 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 32

Conread position: 859-1138
Cow position: chr6:18608833-18608549 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 17

Conread position: 860-1143
Cow position: chr6:64429214-64428930 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 17

Conread position: 860-1148
Cow position: chr6:47778856-47779147 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 266

Conread position: 861-1116
Cow position: chr6:67451389-67451133 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 26

Conread position: 862-1116
Cow position: chr6:20219794-20219540 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 96

Conread position: 864-1135
Cow position: chr6:32453373-32453646 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 35

Conread position: 865-1104
Cow position: chr6:48379628-48379384 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 27

Conread position: 868-1133
Cow position: chr6:63065816-63066096 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 9

Conread position: 870-1127
Cow position: chr6:54831472-54831728 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 12

Conread position: 873-1112
Cow position: chr6:12761268-12761515 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 112

Conread position: 874-1119
Cow position: chr6:55297098-55296850 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 13

Conread position: 885-1126
Cow position: chr6:58304414-58304662 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 153

Conread position: 886-1125
Cow position: chr6:8369429-8369673 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 9, 60

Conread position: 893-1124
Cow position: chr6:57079436-57079673 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 895-1068
Cow position: chr6:21467248-21467078 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 63

Conread position: 900-1113
Cow position: chr6:58725391-58725603 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 65

Conread position: 905-1142
Cow position: chr6:16380570-16380813 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 906-1065
Cow position: chr6:8731435-8731599 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 94

Conread position: 906-1138
Cow position: chr6:66947791-66947561 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 164, 31

Conread position: 909-1066
Cow position: chr6:31865128-31865280 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 909-1112
Cow position: chr6:48435864-48436065 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 161, 27

Conread position: 909-1123
Cow position: chr6:42728675-42728892 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 99

Conread position: 909-1124
Cow position: chr6:66259759-66259984 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 45

Conread position: 909-1134
Cow position: chr6:50771329-50771104 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 26, 33

Conread position: 909-1145
Cow position: chr6:54846249-54846008 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 909-1148
Cow position: chr6:50269653-50269411 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 27

Conread position: 910-1137
Cow position: chr6:17704862-17705094 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 910-1138
Cow position: chr6:16090934-16091158 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 115

Conread position: 912-1124
Cow position: chr6:22876898-22876681 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 24

Conread position: 913-1125
Cow position: chr6:23058244-23058462 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 913-1137
Cow position: chr6:8688813-8688591 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 119

Conread position: 921-1122
Cow position: chr6:15058418-15058619 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 189

Conread position: 921-1124
Cow position: chr6:55044600-55044394 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 91

Conread position: 921-1124
Cow position: chr6:62724597-62724805 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 921-1127
Cow position: chr6:24776180-24776388 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 114

Conread position: 921-1127
Cow position: chr6:42483457-42483666 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 32

Conread position: 921-1137
Cow position: chr6:15587553-15587333 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 202

Conread position: 921-1137
Cow position: chr6:56061702-56061923 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 922-1116
Cow position: chr6:36225151-36225349 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 106

Conread position: 922-1120
Cow position: chr6:19563441-19563236 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 922-1125
Cow position: chr6:37827901-37827701 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 102, 24

Conread position: 922-1130
Cow position: chr6:13742031-13742240 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 58

Conread position: 922-1141
Cow position: chr6:55548491-55548271 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 125

Conread position: 923-1116
Cow position: chr6:3330040-3330235 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 147, 19

Conread position: 926-1116
Cow position: chr6:57467646-57467838 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 15

Conread position: 928-1068
Cow position: chr6:69153458-69153599 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 930-1104
Cow position: chr6:48792831-48793007 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 138, 12

Conread position: 931-1117
Cow position: chr6:50883623-50883439 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 139, 100

Conread position: 936-1066
Cow position: chr6:58076451-58076581 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 936-1104
Cow position: chr6:61644801-61644629 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 132, 0

Conread position: 936-1116
Cow position: chr6:58697574-58697390 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 134, 0

Conread position: 936-1125
Cow position: chr6:53346032-53346214 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 936-1127
Cow position: chr6:57299816-57300022 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 936-1148
Cow position: chr6:18440420-18440212 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 134, 156

Conread position: 936-1155
Cow position: chr6:21052392-21052164 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 938-1120
Cow position: chr6:54820891-54821076 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 181

Conread position: 949-1116
Cow position: chr6:53811653-53811825 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 951-1137
Cow position: chr6:62805715-62805910 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 952-1120
Cow position: chr6:5445741-5445911 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 15

Conread position: 956-1116
Cow position: chr6:59687735-59687571 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 956-1124
Cow position: chr6:56581981-56581807 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 958-1137
Cow position: chr6:28559617-28559801 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 73

Conread position: 959-1116
Cow position: chr6:16627815-16627968 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 81

Conread position: 959-1116
Cow position: chr6:44544068-44543908 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 111, 72

Conread position: 959-1116
Cow position: chr6:50682217-50682060 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 13

Conread position: 959-1120
Cow position: chr6:19225303-19225149 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 959-1120
Cow position: chr6:35985056-35984891 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 959-1123
Cow position: chr6:32006374-32006211 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 77

Conread position: 959-1124
Cow position: chr6:16411691-16411860 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 959-1124
Cow position: chr6:43906603-43906434 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 959-1124
Cow position: chr6:49685898-49686067 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 959-1127
Cow position: chr6:19936489-19936318 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 52

Conread position: 959-1127
Cow position: chr6:54406719-54406555 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 111, 72

Conread position: 959-1129
Cow position: chr6:26408424-26408246 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 959-1130
Cow position: chr6:24903497-24903324 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 111, 159

Conread position: 959-1135
Cow position: chr6:8187109-8186929 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 109, 0

Conread position: 959-1137
Cow position: chr6:62224502-62224683 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 133

Conread position: 959-1140
Cow position: chr6:54840427-54840237 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 959-1142
Cow position: chr6:34076242-34076427 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 83

Conread position: 959-1145
Cow position: chr6:14150299-14150117 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 113

Conread position: 959-1153
Cow position: chr6:55060943-55061146 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 960-1137
Cow position: chr6:59101240-59101058 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 961-1119
Cow position: chr6:28562086-28561926 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 51

Conread position: 961-1127
Cow position: chr6:16137688-16137517 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 961-1134
Cow position: chr6:14152808-14152632 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 78, 131

Conread position: 961-1134
Cow position: chr6:45159975-45159798 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 109, 0

Conread position: 961-1137
Cow position: chr6:53732064-53732244 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 159

Conread position: 961-1138
Cow position: chr6:36163826-36164007 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 961-1140
Cow position: chr6:32336114-32336298 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 153

Conread position: 961-1143
Cow position: chr6:66293567-66293751 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 112, 117

Conread position: 961-1148
Cow position: chr6:55014961-55015154 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 137

Conread position: 962-1116
Cow position: chr6:3936866-3937026 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 966-1120
Cow position: chr6:26764740-26764579 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 966-1120
Cow position: chr6:55945876-55945713 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 966-1125
Cow position: chr6:14263802-14263641 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 27

Conread position: 966-1146
Cow position: chr6:12099599-12099422 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 102, 69

Conread position: 966-1148
Cow position: chr6:31928724-31928911 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 967-1128
Cow position: chr6:57935484-57935325 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 16

Conread position: 967-1137
Cow position: chr6:54828234-54828060 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 968-1136
Cow position: chr6:16016123-16016296 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 52

Conread position: 975-1149
Cow position: chr6:55196309-55196491 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 979-1124
Cow position: chr6:23381568-23381419 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 983-1135
Cow position: chr6:57143592-57143434 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 996-1122
Cow position: chr6:65831478-65831608 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 1006-1136
Cow position: chr6:456824-456691 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 85

Show alignments to all cow chromosomes.