Cow genome map

Conread name: Ss1.1-Pig4-TMW8049N19.3

Conread position: 262-782
Cow position: chrX:28556088-28555555 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 291

Conread position: 297-613
Cow position: chrX:21459221-21458907 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 27

Conread position: 301-478
Cow position: chrX:44206346-44206525 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 82

Conread position: 302-541
Cow position: chrX:32194711-32194458 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 304-515
Cow position: chrX:32584545-32584329 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 304-777
Cow position: chrX:24441853-24441372 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 104

Conread position: 304-785
Cow position: chrX:9898955-9898459 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 215

Conread position: 304-786
Cow position: chrX:18244368-18244870 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 305-780
Cow position: chrX:18950349-18949867 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 79

Conread position: 305-782
Cow position: chrX:9153747-9154240 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 250

Conread position: 305-782
Cow position: chrX:30531640-30531148 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 130

Conread position: 306-527
Cow position: chrX:29722607-29722824 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 74, 0

Conread position: 307-659
Cow position: chrX:32329416-32329765 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 309-1116
Cow position: chrX:40827352-40826522 (view UCSC Genome Browser custom track)
Alignm length: 841
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 76

Conread position: 311-693
Cow position: chrX:23382791-23382391 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 249
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 311-734
Cow position: chrX:3628169-3628600 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 279
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 71

Conread position: 311-771
Cow position: chrX:23280403-23280873 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 256

Conread position: 311-780
Cow position: chrX:2664405-2664887 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 241

Conread position: 312-663
Cow position: chrX:9911376-9911019 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 36

Conread position: 319-761
Cow position: chrX:24826739-24827183 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 5

Conread position: 319-780
Cow position: chrX:15780985-15781459 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 233

Conread position: 328-680
Cow position: chrX:10077954-10078307 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 16

Conread position: 329-471
Cow position: chrX:19657911-19658053 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 329-479
Cow position: chrX:32071267-32071116 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 0

Conread position: 329-515
Cow position: chrX:4177233-4177421 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 169, 0

Conread position: 329-527
Cow position: chrX:21060884-21061084 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 13, 162

Conread position: 329-549
Cow position: chrX:20544706-20544471 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 329-691
Cow position: chrX:27485817-27486187 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 329-693
Cow position: chrX:27117378-27117745 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 30

Conread position: 329-718
Cow position: chrX:33631568-33631967 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 206

Conread position: 329-780
Cow position: chrX:22811303-22811763 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 63

Conread position: 329-896
Cow position: chrX:42462336-42461739 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 61

Conread position: 329-1028
Cow position: chrX:10412559-10411847 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 54

Conread position: 329-1138
Cow position: chrX:16711369-16712212 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 165

Conread position: 331-526
Cow position: chrX:23022729-23022924 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 331-527
Cow position: chrX:15486244-15486048 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 331-693
Cow position: chrX:25575375-25575742 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 0

Conread position: 331-787
Cow position: chrX:15120469-15120003 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 53

Conread position: 332-662
Cow position: chrX:5246664-5247001 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 332-1127
Cow position: chrX:27443141-27442299 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 69

Conread position: 333-473
Cow position: chrX:20888191-20888051 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 333-479
Cow position: chrX:20707912-20708057 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 333-479
Cow position: chrX:48370277-48370429 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 333-482
Cow position: chrX:24109189-24109041 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 333-488
Cow position: chrX:16688686-16688841 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 333-511
Cow position: chrX:631202-631024 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 26

Conread position: 333-515
Cow position: chrX:22869487-22869305 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 157, 58

Conread position: 333-515
Cow position: chrX:25451740-25451922 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 99

Conread position: 333-515
Cow position: chrX:30089635-30089452 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 92

Conread position: 333-520
Cow position: chrX:21565558-21565744 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 0

Conread position: 333-524
Cow position: chrX:20445729-20445540 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 333-526
Cow position: chrX:40365325-40365133 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 333-533
Cow position: chrX:28156953-28157151 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 333-536
Cow position: chrX:25360980-25361182 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 333-539
Cow position: chrX:2300298-2300503 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 197, 0

Conread position: 333-539
Cow position: chrX:12095167-12094961 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 333-540
Cow position: chrX:18455364-18455157 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 80

Conread position: 333-540
Cow position: chrX:33884567-33884776 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 40

Conread position: 333-555
Cow position: chrX:4632602-4632386 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 102, 0

Conread position: 333-557
Cow position: chrX:22125449-22125224 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 156, 0

Conread position: 333-569
Cow position: chrX:42010453-42010687 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 28

Conread position: 333-579
Cow position: chrX:26764674-26764428 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 333-581
Cow position: chrX:22871532-22871780 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 49

Conread position: 333-590
Cow position: chrX:30060306-30060563 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 333-591
Cow position: chrX:487955-488220 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 46

Conread position: 333-595
Cow position: chrX:40450213-40449949 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 222, 100

Conread position: 333-621
Cow position: chrX:20766535-20766826 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 30

Conread position: 333-629
Cow position: chrX:18194108-18194404 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 333-629
Cow position: chrX:23452027-23451743 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 109

Conread position: 333-639
Cow position: chrX:10960077-10960389 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 27

Conread position: 333-644
Cow position: chrX:18711954-18712267 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 221, 41

Conread position: 333-651
Cow position: chrX:9854691-9855015 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 333-651
Cow position: chrX:42499656-42499329 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 333-655
Cow position: chrX:20726178-20726500 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 333-658
Cow position: chrX:24174534-24174206 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 64

Conread position: 333-663
Cow position: chrX:26749461-26749125 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 162

Conread position: 333-663
Cow position: chrX:34543184-34543511 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 61

Conread position: 333-668
Cow position: chrX:34993589-34993929 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 114

Conread position: 333-671
Cow position: chrX:36975258-36975600 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 333-674
Cow position: chrX:25816836-25816496 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 20

Conread position: 333-676
Cow position: chrX:6279188-6278852 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 333-676
Cow position: chrX:17610041-17609693 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 88

Conread position: 333-680
Cow position: chrX:13889254-13889605 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 64, 56

Conread position: 333-680
Cow position: chrX:15038394-15038035 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 333-682
Cow position: chrX:2701419-2701066 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 286

Conread position: 333-682
Cow position: chrX:6202925-6203277 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 159

Conread position: 333-682
Cow position: chrX:17230924-17231266 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 79

Conread position: 333-683
Cow position: chrX:32430757-32431098 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 333-685
Cow position: chrX:21501036-21501392 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 227, 185

Conread position: 333-685
Cow position: chrX:38999321-38999669 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 93

Conread position: 333-688
Cow position: chrX:7572799-7573155 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 46

Conread position: 333-690
Cow position: chrX:26752505-26752143 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 346

Conread position: 333-693
Cow position: chrX:14408032-14407669 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 0

Conread position: 333-693
Cow position: chrX:15574468-15574105 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 227
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 237, 210

Conread position: 333-693
Cow position: chrX:17891957-17892324 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 333-693
Cow position: chrX:36794412-36794775 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 0

Conread position: 333-693
Cow position: chrX:37134115-37133753 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 87

Conread position: 333-708
Cow position: chrX:23038579-23038202 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 373

Conread position: 333-720
Cow position: chrX:24482951-24482564 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 87

Conread position: 333-725
Cow position: chrX:31202259-31202652 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 85

Conread position: 333-763
Cow position: chrX:24292261-24291823 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 237

Conread position: 333-763
Cow position: chrX:27977413-27976970 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 333-766
Cow position: chrX:28542475-28542035 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 82

Conread position: 333-766
Cow position: chrX:41049533-41049977 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 41

Conread position: 333-767
Cow position: chrX:27450632-27450158 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 46

Conread position: 333-771
Cow position: chrX:23387120-23386680 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 90

Conread position: 333-771
Cow position: chrX:23396025-23396465 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 90

Conread position: 333-776
Cow position: chrX:40545204-40544734 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 232

Conread position: 333-777
Cow position: chrX:4905572-4905114 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 333-777
Cow position: chrX:22600997-22600542 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 136

Conread position: 333-777
Cow position: chrX:38052014-38051559 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 432

Conread position: 333-779
Cow position: chrX:30919973-30919515 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 87

Conread position: 333-779
Cow position: chrX:34840353-34839902 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 333-780
Cow position: chrX:7551385-7550918 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 333-780
Cow position: chrX:16853972-16853511 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 333-780
Cow position: chrX:18078493-18078032 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 333-780
Cow position: chrX:30143866-30143407 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 323

Conread position: 333-782
Cow position: chrX:23986668-23987124 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 23

Conread position: 333-782
Cow position: chrX:34761484-34761946 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 219

Conread position: 333-785
Cow position: chrX:30455204-30454739 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 0

Conread position: 333-785
Cow position: chrX:41304320-41303864 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 47

Conread position: 333-786
Cow position: chrX:5353885-5353418 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 0

Conread position: 333-786
Cow position: chrX:22493425-22493892 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 0

Conread position: 333-786
Cow position: chrX:30822935-30823401 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 46

Conread position: 333-786
Cow position: chrX:41156729-41157196 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 421

Conread position: 333-787
Cow position: chrX:5375776-5376255 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 333-787
Cow position: chrX:29915806-29915340 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 47

Conread position: 333-787
Cow position: chrX:30228696-30228225 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 291

Conread position: 333-787
Cow position: chrX:35240284-35240750 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 45

Conread position: 333-792
Cow position: chrX:38151106-38151578 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 88

Conread position: 333-797
Cow position: chrX:23134996-23135462 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 45

Conread position: 333-804
Cow position: chrX:33822517-33823012 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 30

Conread position: 333-812
Cow position: chrX:29049398-29049881 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 59

Conread position: 333-818
Cow position: chrX:13851907-13852399 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 329
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 233, 61

Conread position: 333-819
Cow position: chrX:34009165-34009673 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 60

Conread position: 333-823
Cow position: chrX:6012687-6012177 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 81

Conread position: 333-823
Cow position: chrX:19228651-19228135 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 105

Conread position: 333-825
Cow position: chrX:1793750-1793244 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 330
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 120, 98

Conread position: 333-830
Cow position: chrX:26531377-26531897 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 193

Conread position: 333-830
Cow position: chrX:30180509-30179989 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 333-840
Cow position: chrX:14908431-14908952 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 17

Conread position: 333-843
Cow position: chrX:37906377-37906913 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 371
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 214, 35

Conread position: 333-851
Cow position: chrX:7805795-7806338 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 15

Conread position: 333-868
Cow position: chrX:27095537-27096093 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 422

Conread position: 333-899
Cow position: chrX:35288074-35288664 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 46

Conread position: 333-925
Cow position: chrX:38438906-38439514 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 139

Conread position: 333-989
Cow position: chrX:29942568-29943251 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 161

Conread position: 333-1002
Cow position: chrX:6493150-6493847 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 562

Conread position: 333-1027
Cow position: chrX:11083192-11082486 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 155

Conread position: 333-1039
Cow position: chrX:20801191-20801918 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 120

Conread position: 333-1116
Cow position: chrX:10866449-10865642 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 94

Conread position: 333-1123
Cow position: chrX:31728881-31729673 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 96

Conread position: 333-1124
Cow position: chrX:34564719-34565521 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 41

Conread position: 333-1124
Cow position: chrX:41879512-41878701 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 302

Conread position: 333-1124
Cow position: chrX:44193022-44192206 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 49

Conread position: 333-1125
Cow position: chrX:31488932-31489759 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 74

Conread position: 333-1126
Cow position: chrX:23121815-23122629 (view UCSC Genome Browser custom track)
Alignm length: 836
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 75

Conread position: 333-1137
Cow position: chrX:22812480-22813314 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 572

Conread position: 333-1137
Cow position: chrX:34554154-34554978 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 132

Conread position: 333-1141
Cow position: chrX:30133889-30133073 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 55

Conread position: 334-515
Cow position: chrX:18288040-18287865 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 334-540
Cow position: chrX:21196442-21196646 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 195, 12

Conread position: 335-1000
Cow position: chrX:26626278-26625562 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 517

Conread position: 336-515
Cow position: chrX:28608592-28608414 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 106, 0

Conread position: 336-540
Cow position: chrX:17158407-17158203 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 336-669
Cow position: chrX:23666604-23666937 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 194

Conread position: 336-692
Cow position: chrX:16000057-15999722 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 78

Conread position: 337-508
Cow position: chrX:27022236-27022412 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 37

Conread position: 337-692
Cow position: chrX:44491010-44490664 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 214, 208

Conread position: 337-693
Cow position: chrX:41114618-41114985 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 17

Conread position: 337-766
Cow position: chrX:44019122-44019561 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 298
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 138, 44

Conread position: 337-792
Cow position: chrX:24280359-24280826 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 56

Conread position: 337-877
Cow position: chrX:31261214-31260645 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 157

Conread position: 338-488
Cow position: chrX:26441837-26441687 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 338-514
Cow position: chrX:14263355-14263179 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 338-531
Cow position: chrX:15306309-15306116 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 157

Conread position: 338-555
Cow position: chrX:11614117-11614335 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 94, 0

Conread position: 338-607
Cow position: chrX:12033500-12033235 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 218, 63

Conread position: 338-680
Cow position: chrX:20131468-20131116 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 47, 347

Conread position: 338-680
Cow position: chrX:24309692-24309355 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 331, 69

Conread position: 338-766
Cow position: chrX:20974477-20974893 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 283
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 66

Conread position: 338-1127
Cow position: chrX:41103215-41104042 (view UCSC Genome Browser custom track)
Alignm length: 835
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 35

Conread position: 339-562
Cow position: chrX:40187400-40187625 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 339-591
Cow position: chrX:25198865-25199122 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 52, 34

Conread position: 339-627
Cow position: chrX:1525223-1524933 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 109

Conread position: 339-761
Cow position: chrX:37949200-37949633 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 287
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 344

Conread position: 339-823
Cow position: chrX:5676266-5675778 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 327
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 229, 68

Conread position: 339-880
Cow position: chrX:29876637-29876084 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 53

Conread position: 340-534
Cow position: chrX:29023487-29023684 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 8

Conread position: 340-630
Cow position: chrX:35260401-35260692 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 0

Conread position: 340-693
Cow position: chrX:44367201-44367557 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 33

Conread position: 340-777
Cow position: chrX:1519025-1518566 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 300
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 340-782
Cow position: chrX:5406483-5406935 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 98

Conread position: 340-782
Cow position: chrX:37957922-37958377 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 212

Conread position: 341-509
Cow position: chrX:2324132-2324298 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 108, 0

Conread position: 341-559
Cow position: chrX:27982944-27982726 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 160, 73

Conread position: 341-767
Cow position: chrX:41847108-41846671 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 0

Conread position: 341-773
Cow position: chrX:30139358-30138913 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 0

Conread position: 341-1133
Cow position: chrX:4633430-4632606 (view UCSC Genome Browser custom track)
Alignm length: 836
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 82

Conread position: 342-440
Cow position: chrX:39511759-39511857 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 342-472
Cow position: chrX:1947532-1947402 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 342-473
Cow position: chrX:13922654-13922787 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 39, 48

Conread position: 342-476
Cow position: chrX:21495069-21495203 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 342-477
Cow position: chrX:38935853-38935988 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 342-479
Cow position: chrX:10438511-10438375 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 117
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 122, 68

Conread position: 342-479
Cow position: chrX:39556368-39556230 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 119
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 0

Conread position: 342-479
Cow position: chrX:42222361-42222224 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 342-488
Cow position: chrX:30544555-30544410 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 342-498
Cow position: chrX:17490765-17490928 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 342-511
Cow position: chrX:21390219-21390383 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 342-511
Cow position: chrX:30165246-30165081 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 342-511
Cow position: chrX:31372889-31373058 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 147

Conread position: 342-513
Cow position: chrX:28879179-28879008 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 342-515
Cow position: chrX:32057472-32057299 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 342-515
Cow position: chrX:39387004-39386831 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 342-516
Cow position: chrX:21582869-21583043 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 342-518
Cow position: chrX:11744695-11744869 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 342-518
Cow position: chrX:25946620-25946440 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 94

Conread position: 342-519
Cow position: chrX:16744613-16744790 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 342-524
Cow position: chrX:30421721-30421538 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 134, 0

Conread position: 342-524
Cow position: chrX:40384473-40384655 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 149
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 342-524
Cow position: chrX:40601546-40601728 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 342-526
Cow position: chrX:14990069-14989885 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 342-537
Cow position: chrX:7178090-7178273 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 342-537
Cow position: chrX:16020957-16020763 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 342-537
Cow position: chrX:29055346-29055535 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 163, 59

Conread position: 342-539
Cow position: chrX:43566880-43567077 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 148, 107

Conread position: 342-550
Cow position: chrX:11632075-11632282 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 342-550
Cow position: chrX:15151249-15151049 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 156, 39

Conread position: 342-556
Cow position: chrX:40542098-40542308 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 205, 40

Conread position: 342-557
Cow position: chrX:34663546-34663330 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 38

Conread position: 342-563
Cow position: chrX:44396377-44396593 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 82, 0

Conread position: 342-586
Cow position: chrX:39702278-39702514 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 145, 21

Conread position: 342-589
Cow position: chrX:9161193-9160944 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 342-593
Cow position: chrX:16782707-16782958 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 342-593
Cow position: chrX:45421572-45421319 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 92

Conread position: 342-594
Cow position: chrX:26508664-26508924 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 148, 0

Conread position: 342-596
Cow position: chrX:28558314-28558566 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 342-597
Cow position: chrX:45975986-45976241 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 75

Conread position: 342-612
Cow position: chrX:865823-866093 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 342-620
Cow position: chrX:36202819-36203094 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 69

Conread position: 342-625
Cow position: chrX:37364149-37364430 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 155, 39

Conread position: 342-637
Cow position: chrX:30354813-30355117 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 111, 175

Conread position: 342-642
Cow position: chrX:3145430-3145735 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 50

Conread position: 342-651
Cow position: chrX:9953542-9953856 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 342-655
Cow position: chrX:11073781-11073465 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 37

Conread position: 342-656
Cow position: chrX:33815573-33815893 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 41

Conread position: 342-661
Cow position: chrX:15993822-15994133 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 198, 47

Conread position: 342-663
Cow position: chrX:2185666-2185975 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 220, 82

Conread position: 342-663
Cow position: chrX:4482380-4482686 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 342-663
Cow position: chrX:6766318-6765990 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 342-663
Cow position: chrX:8517031-8517356 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 152

Conread position: 342-663
Cow position: chrX:17265620-17265298 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 96

Conread position: 342-663
Cow position: chrX:17663492-17663164 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 12

Conread position: 342-663
Cow position: chrX:23414961-23414634 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 342-663
Cow position: chrX:24366525-24366202 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 79

Conread position: 342-663
Cow position: chrX:30980466-30980156 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 112, 205

Conread position: 342-675
Cow position: chrX:11855596-11855929 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 342-676
Cow position: chrX:2382894-2383215 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 88

Conread position: 342-677
Cow position: chrX:19127821-19127465 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 160, 78

Conread position: 342-680
Cow position: chrX:4768143-4768464 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 203

Conread position: 342-680
Cow position: chrX:6835834-6835494 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 229, 60

Conread position: 342-680
Cow position: chrX:13057985-13058330 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 181

Conread position: 342-680
Cow position: chrX:17631406-17631062 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 182

Conread position: 342-680
Cow position: chrX:29875574-29875227 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 40, 88

Conread position: 342-681
Cow position: chrX:22409293-22408950 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 337

Conread position: 342-682
Cow position: chrX:1499018-1499360 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 50

Conread position: 342-682
Cow position: chrX:1977920-1978262 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 125

Conread position: 342-682
Cow position: chrX:7512919-7513258 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 342-682
Cow position: chrX:12724194-12724537 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 182

Conread position: 342-682
Cow position: chrX:20653997-20654347 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 150, 123

Conread position: 342-682
Cow position: chrX:39558938-39558601 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 342-687
Cow position: chrX:35025238-35025576 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 50

Conread position: 342-692
Cow position: chrX:13404925-13404565 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 136

Conread position: 342-693
Cow position: chrX:40224818-40224462 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 342-694
Cow position: chrX:21415508-21415870 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 97

Conread position: 342-728
Cow position: chrX:6406773-6407163 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 140

Conread position: 342-756
Cow position: chrX:525106-525528 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 51

Conread position: 342-761
Cow position: chrX:38140613-38140179 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 295

Conread position: 342-767
Cow position: chrX:3807830-3808271 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 72

Conread position: 342-767
Cow position: chrX:4326064-4325634 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 300
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 41

Conread position: 342-773
Cow position: chrX:323342-323769 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 349

Conread position: 342-773
Cow position: chrX:41433982-41433555 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 136

Conread position: 342-775
Cow position: chrX:22330142-22329698 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 38

Conread position: 342-775
Cow position: chrX:33614824-33615276 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 342-777
Cow position: chrX:27997078-27997521 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 94

Conread position: 342-779
Cow position: chrX:25329447-25329888 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 191

Conread position: 342-779
Cow position: chrX:27323432-27322993 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 41

Conread position: 342-780
Cow position: chrX:2465853-2465402 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 28, 71

Conread position: 342-780
Cow position: chrX:16703098-16703548 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 152

Conread position: 342-782
Cow position: chrX:8782171-8782624 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 210

Conread position: 342-782
Cow position: chrX:15114098-15114551 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 214

Conread position: 342-782
Cow position: chrX:24735371-24735818 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 152

Conread position: 342-782
Cow position: chrX:28513500-28513951 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 158

Conread position: 342-782
Cow position: chrX:29760114-29760579 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 222

Conread position: 342-786
Cow position: chrX:29780154-29780623 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 342-787
Cow position: chrX:14162619-14163077 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 46

Conread position: 342-787
Cow position: chrX:18898222-18897770 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 29

Conread position: 342-787
Cow position: chrX:32871359-32870901 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 397

Conread position: 342-788
Cow position: chrX:2479200-2478741 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 0

Conread position: 342-790
Cow position: chrX:3569869-3570338 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 342-793
Cow position: chrX:19437658-19437190 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 321
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 73

Conread position: 342-797
Cow position: chrX:15718264-15717783 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 305

Conread position: 342-803
Cow position: chrX:47000225-46999759 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 79

Conread position: 342-809
Cow position: chrX:45658649-45658160 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 47

Conread position: 342-824
Cow position: chrX:40279236-40279749 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 79

Conread position: 342-826
Cow position: chrX:35409101-35409591 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 12

Conread position: 342-830
Cow position: chrX:26755202-26754707 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 224

Conread position: 342-831
Cow position: chrX:11950065-11949557 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 6

Conread position: 342-831
Cow position: chrX:27590607-27590100 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 319

Conread position: 342-840
Cow position: chrX:21226901-21227420 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 260

Conread position: 342-881
Cow position: chrX:1810733-1810172 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 220

Conread position: 342-881
Cow position: chrX:35388481-35387911 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 342-899
Cow position: chrX:33827622-33827005 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 259

Conread position: 342-909
Cow position: chrX:15329079-15329665 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 480

Conread position: 342-929
Cow position: chrX:45413222-45412624 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 42

Conread position: 342-930
Cow position: chrX:36250437-36249823 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 151

Conread position: 342-932
Cow position: chrX:17497523-17498125 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 443

Conread position: 342-940
Cow position: chrX:15140121-15139498 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 146

Conread position: 342-947
Cow position: chrX:43408427-43409065 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 19

Conread position: 342-960
Cow position: chrX:35609415-35610060 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 36

Conread position: 342-983
Cow position: chrX:28646555-28645902 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 38

Conread position: 342-985
Cow position: chrX:21785196-21785868 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 152

Conread position: 342-1015
Cow position: chrX:11819791-11820476 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 136

Conread position: 342-1015
Cow position: chrX:22538527-22537820 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 635

Conread position: 342-1021
Cow position: chrX:7571330-7572037 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 483

Conread position: 342-1029
Cow position: chrX:41122497-41123197 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 222

Conread position: 342-1068
Cow position: chrX:28866557-28865828 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 134

Conread position: 342-1087
Cow position: chrX:1055964-1055182 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 47

Conread position: 342-1100
Cow position: chrX:12309959-12309173 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 199

Conread position: 342-1112
Cow position: chrX:47211414-47210612 (view UCSC Genome Browser custom track)
Alignm length: 817
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 150

Conread position: 342-1116
Cow position: chrX:12290165-12290946 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 38

Conread position: 342-1125
Cow position: chrX:37489153-37489967 (view UCSC Genome Browser custom track)
Alignm length: 834
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 180

Conread position: 342-1127
Cow position: chrX:38072340-38071535 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 316

Conread position: 342-1127
Cow position: chrX:44054230-44055042 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 340

Conread position: 342-1128
Cow position: chrX:160855-161639 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 422

Conread position: 342-1129
Cow position: chrX:21592714-21593532 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 12

Conread position: 342-1137
Cow position: chrX:27446122-27446930 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 158

Conread position: 342-1151
Cow position: chrX:16078093-16078933 (view UCSC Genome Browser custom track)
Alignm length: 848
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 12

Conread position: 342-1152
Cow position: chrX:151332-152173 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 36

Conread position: 343-499
Cow position: chrX:30142181-30142019 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 343-680
Cow position: chrX:7424854-7425196 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 133

Conread position: 344-693
Cow position: chrX:8590962-8591321 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 344-702
Cow position: chrX:17200216-17200592 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 367

Conread position: 344-766
Cow position: chrX:7809580-7809140 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 293
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 29, 42

Conread position: 345-470
Cow position: chrX:5248815-5248936 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 345-477
Cow position: chrX:15008889-15008757 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 345-479
Cow position: chrX:1729432-1729298 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 345-479
Cow position: chrX:5018174-5018040 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 345-488
Cow position: chrX:4943780-4943636 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 121
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 126, 0

Conread position: 345-505
Cow position: chrX:27616233-27616394 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 136
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 67, 0

Conread position: 345-508
Cow position: chrX:3652442-3652605 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 110, 137

Conread position: 345-534
Cow position: chrX:20998846-20998656 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 149, 0

Conread position: 345-537
Cow position: chrX:5292500-5292306 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 345-541
Cow position: chrX:16290591-16290387 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 345-543
Cow position: chrX:10301552-10301747 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 345-543
Cow position: chrX:21625549-21625352 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 59

Conread position: 345-548
Cow position: chrX:21255206-21255409 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 345-556
Cow position: chrX:1958559-1958345 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 345-575
Cow position: chrX:5639507-5639277 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 345-596
Cow position: chrX:45464876-45465125 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 345-663
Cow position: chrX:17122607-17122285 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 86, 10

Conread position: 345-663
Cow position: chrX:25404926-25404607 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 28

Conread position: 345-663
Cow position: chrX:33493162-33493480 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 345-663
Cow position: chrX:37955331-37955650 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 48

Conread position: 345-668
Cow position: chrX:39352214-39351892 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 70

Conread position: 345-672
Cow position: chrX:44961150-44961470 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 9

Conread position: 345-675
Cow position: chrX:44568418-44568755 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 298

Conread position: 345-675
Cow position: chrX:44901574-44901911 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 345-680
Cow position: chrX:25436501-25436162 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 205, 75

Conread position: 345-680
Cow position: chrX:33538357-33538694 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 75

Conread position: 345-682
Cow position: chrX:19929865-19930198 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 38

Conread position: 345-682
Cow position: chrX:37066702-37067044 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 97

Conread position: 345-689
Cow position: chrX:38852589-38852933 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 345-694
Cow position: chrX:10256712-10256362 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 210

Conread position: 345-734
Cow position: chrX:41594852-41594443 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 63

Conread position: 345-761
Cow position: chrX:4665189-4664760 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 282
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 63

Conread position: 345-777
Cow position: chrX:21833299-21833760 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 345-777
Cow position: chrX:25459209-25458762 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 345-779
Cow position: chrX:13971809-13971350 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 226

Conread position: 345-780
Cow position: chrX:20878332-20877885 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 207

Conread position: 345-782
Cow position: chrX:3372423-3371978 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 262

Conread position: 345-782
Cow position: chrX:10915468-10915918 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 0

Conread position: 345-782
Cow position: chrX:12347307-12347758 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 208

Conread position: 345-782
Cow position: chrX:12360318-12360769 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 207

Conread position: 345-782
Cow position: chrX:20021007-20021443 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 211

Conread position: 345-782
Cow position: chrX:43217821-43218272 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 123

Conread position: 345-786
Cow position: chrX:13405867-13405431 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 208

Conread position: 345-805
Cow position: chrX:17743499-17743962 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 207

Conread position: 345-818
Cow position: chrX:44802877-44803344 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 178

Conread position: 345-819
Cow position: chrX:20652838-20653322 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 81

Conread position: 345-825
Cow position: chrX:45042985-45043494 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 345-879
Cow position: chrX:3405923-3405372 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 37

Conread position: 345-895
Cow position: chrX:42086293-42086861 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 167

Conread position: 345-901
Cow position: chrX:729434-728898 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 38

Conread position: 345-908
Cow position: chrX:39546550-39545958 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 345-914
Cow position: chrX:20582462-20583044 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 34

Conread position: 345-933
Cow position: chrX:47380037-47379426 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 345-991
Cow position: chrX:44874102-44873461 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 33

Conread position: 345-1002
Cow position: chrX:27498198-27498883 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 40

Conread position: 345-1043
Cow position: chrX:29289007-29289730 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 149

Conread position: 345-1050
Cow position: chrX:878934-878221 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 40

Conread position: 345-1104
Cow position: chrX:41192119-41192905 (view UCSC Genome Browser custom track)
Alignm length: 801
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 731

Conread position: 345-1112
Cow position: chrX:37071837-37072610 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 43

Conread position: 345-1113
Cow position: chrX:35268326-35269081 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 37

Conread position: 345-1113
Cow position: chrX:45967609-45968362 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 44

Conread position: 345-1116
Cow position: chrX:14884532-14883729 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 259

Conread position: 345-1116
Cow position: chrX:34442013-34441225 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 87

Conread position: 345-1125
Cow position: chrX:4996045-4996825 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 160

Conread position: 345-1138
Cow position: chrX:3654038-3654855 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 109

Conread position: 346-498
Cow position: chrX:10146236-10146085 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 148, 0

Conread position: 346-523
Cow position: chrX:41082678-41082854 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 146
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 346-668
Cow position: chrX:13359825-13360146 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 67, 25

Conread position: 346-761
Cow position: chrX:20970346-20970780 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 289
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 420

Conread position: 346-824
Cow position: chrX:18293370-18293858 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 122

Conread position: 346-1054
Cow position: chrX:40268907-40269657 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 490

Conread position: 346-1125
Cow position: chrX:27705024-27705823 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 189

Conread position: 346-1127
Cow position: chrX:34222182-34222947 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 183

Conread position: 347-474
Cow position: chrX:7444367-7444494 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 347-478
Cow position: chrX:619387-619256 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 112
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 347-479
Cow position: chrX:22578957-22578825 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 347-479
Cow position: chrX:36840135-36840267 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 347-515
Cow position: chrX:22819697-22819865 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 140
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 347-515
Cow position: chrX:37069154-37069327 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 114, 0

Conread position: 347-538
Cow position: chrX:31496168-31496359 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 347-573
Cow position: chrX:3081699-3081473 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 205

Conread position: 347-642
Cow position: chrX:9642000-9641705 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 205

Conread position: 347-663
Cow position: chrX:44052334-44052655 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 166, 199

Conread position: 347-671
Cow position: chrX:39939322-39938994 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 295

Conread position: 347-680
Cow position: chrX:13785951-13785613 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 330

Conread position: 347-680
Cow position: chrX:29602608-29602281 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 147

Conread position: 347-688
Cow position: chrX:39757465-39757809 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 0

Conread position: 347-690
Cow position: chrX:4750940-4750601 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 347-692
Cow position: chrX:16040249-16039900 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 221

Conread position: 347-693
Cow position: chrX:29841737-29841388 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-693
Cow position: chrX:39292311-39291962 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 0

Conread position: 347-725
Cow position: chrX:8434772-8434395 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 208

Conread position: 347-725
Cow position: chrX:16046579-16046961 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 347-777
Cow position: chrX:15621100-15620657 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 206

Conread position: 347-777
Cow position: chrX:30163806-30163365 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 85

Conread position: 347-779
Cow position: chrX:18656373-18655928 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 206

Conread position: 347-779
Cow position: chrX:20742419-20742863 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 123

Conread position: 347-779
Cow position: chrX:26974342-26974787 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 204

Conread position: 347-780
Cow position: chrX:29849200-29848753 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 347-782
Cow position: chrX:3361253-3361698 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 198

Conread position: 347-782
Cow position: chrX:5123927-5123481 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 207

Conread position: 347-782
Cow position: chrX:5306033-5306479 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 147

Conread position: 347-782
Cow position: chrX:8529972-8530420 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-782
Cow position: chrX:10932105-10932552 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 147

Conread position: 347-782
Cow position: chrX:14598278-14598725 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 198

Conread position: 347-782
Cow position: chrX:15260187-15259739 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 0

Conread position: 347-782
Cow position: chrX:16465732-16466181 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-782
Cow position: chrX:25289247-25288799 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 206

Conread position: 347-782
Cow position: chrX:26760136-26759689 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 230

Conread position: 347-782
Cow position: chrX:27305361-27305806 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 81

Conread position: 347-782
Cow position: chrX:27422849-27422402 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-782
Cow position: chrX:29903174-29903623 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-782
Cow position: chrX:30196729-30197177 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 205

Conread position: 347-782
Cow position: chrX:31978409-31977966 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 141

Conread position: 347-782
Cow position: chrX:38230835-38230387 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-782
Cow position: chrX:38330814-38331260 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 205

Conread position: 347-782
Cow position: chrX:40591118-40591566 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-782
Cow position: chrX:45236898-45237346 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 347-782
Cow position: chrX:46297092-46297540 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 205

Conread position: 347-793
Cow position: chrX:6906375-6905929 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 308
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 204, 81

Conread position: 347-810
Cow position: chrX:4630267-4629770 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 84

Conread position: 347-874
Cow position: chrX:2648929-2648369 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 105

Conread position: 347-1015
Cow position: chrX:3649376-3648689 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 501

Conread position: 347-1111
Cow position: chrX:37781645-37780889 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 55

Conread position: 347-1116
Cow position: chrX:7695212-7695991 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 157

Conread position: 347-1124
Cow position: chrX:11655515-11656314 (view UCSC Genome Browser custom track)
Alignm length: 824
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 55

Conread position: 348-470
Cow position: chrX:28133547-28133665 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 348-540
Cow position: chrX:24231838-24231644 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 98

Conread position: 348-782
Cow position: chrX:11566347-11566794 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 0

Conread position: 349-593
Cow position: chrX:6235206-6234979 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 25, 0

Conread position: 349-594
Cow position: chrX:6642125-6642384 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 145, 0

Conread position: 349-782
Cow position: chrX:2579853-2580279 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 132

Conread position: 349-782
Cow position: chrX:10351295-10351741 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 349-787
Cow position: chrX:23572365-23571914 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 33

Conread position: 350-455
Cow position: chrX:35283712-35283816 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 350-503
Cow position: chrX:617013-616860 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 129
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 350-517
Cow position: chrX:34502380-34502551 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 97

Conread position: 350-517
Cow position: chrX:34719948-34720115 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 140
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 350-541
Cow position: chrX:13030776-13030585 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 350-557
Cow position: chrX:8103868-8103666 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 73

Conread position: 350-563
Cow position: chrX:10465220-10465433 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-603
Cow position: chrX:2293165-2292912 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-605
Cow position: chrX:12996420-12996171 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 350-613
Cow position: chrX:28706537-28706800 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-655
Cow position: chrX:37832037-37831727 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 97

Conread position: 350-656
Cow position: chrX:40475394-40475100 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 350-663
Cow position: chrX:16324809-16324499 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 30

Conread position: 350-680
Cow position: chrX:28624325-28623994 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 158

Conread position: 350-681
Cow position: chrX:30688500-30688834 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-685
Cow position: chrX:30825083-30825421 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-693
Cow position: chrX:2715057-2715403 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-693
Cow position: chrX:24975379-24975718 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 191

Conread position: 350-693
Cow position: chrX:28313860-28314206 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-693
Cow position: chrX:41762375-41762050 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 39

Conread position: 350-761
Cow position: chrX:26878091-26878522 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 150

Conread position: 350-777
Cow position: chrX:28588406-28588843 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 150

Conread position: 350-777
Cow position: chrX:36513896-36514327 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 269

Conread position: 350-777
Cow position: chrX:47144511-47144966 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 192

Conread position: 350-779
Cow position: chrX:30816834-30816392 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-780
Cow position: chrX:1976162-1975719 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-780
Cow position: chrX:10923136-10922693 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-780
Cow position: chrX:19775045-19774602 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-780
Cow position: chrX:20098757-20099200 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-780
Cow position: chrX:30965536-30965979 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-780
Cow position: chrX:37061356-37060913 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chrX:2151497-2151053 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 216

Conread position: 350-782
Cow position: chrX:3096320-3095890 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 282

Conread position: 350-782
Cow position: chrX:4622519-4622074 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chrX:5892663-5893108 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chrX:7486299-7486744 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-782
Cow position: chrX:9018868-9018423 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chrX:16734960-16735404 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 43

Conread position: 350-782
Cow position: chrX:22609157-22608712 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-782
Cow position: chrX:22888093-22888539 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-782
Cow position: chrX:26275573-26276019 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 350-782
Cow position: chrX:29225913-29226356 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 131

Conread position: 350-782
Cow position: chrX:29777477-29777921 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 350-782
Cow position: chrX:30159560-30159131 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 184

Conread position: 350-782
Cow position: chrX:30172272-30171830 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 30

Conread position: 350-782
Cow position: chrX:30752210-30752654 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 29

Conread position: 350-782
Cow position: chrX:38014529-38014974 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 359

Conread position: 350-783
Cow position: chrX:22556936-22557382 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 202

Conread position: 350-809
Cow position: chrX:18451644-18451174 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 203

Conread position: 350-838
Cow position: chrX:20032396-20031887 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 367

Conread position: 350-850
Cow position: chrX:26617486-26616974 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 442

Conread position: 350-902
Cow position: chrX:11674491-11675075 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 96

Conread position: 350-932
Cow position: chrX:34990496-34991076 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 73

Conread position: 350-940
Cow position: chrX:35680779-35681391 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 145

Conread position: 350-1128
Cow position: chrX:24317502-24318304 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 70

Conread position: 351-511
Cow position: chrX:44737695-44737534 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 351-539
Cow position: chrX:45400604-45400416 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 131

Conread position: 351-573
Cow position: chrX:22771698-22771474 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 139, 0

Conread position: 351-662
Cow position: chrX:33589573-33589886 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 69

Conread position: 351-663
Cow position: chrX:40496162-40495850 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 219, 93

Conread position: 351-680
Cow position: chrX:25163216-25163559 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 85, 38

Conread position: 351-1134
Cow position: chrX:6543694-6544491 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 23

Conread position: 352-607
Cow position: chrX:12823437-12823698 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 204, 0

Conread position: 352-657
Cow position: chrX:6695911-6695603 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 30

Conread position: 353-594
Cow position: chrX:38007540-38007299 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 354-495
Cow position: chrX:1616797-1616658 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 354-510
Cow position: chrX:14049755-14049599 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 130
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 354-523
Cow position: chrX:33685004-33684836 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 142
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 161, 0

Conread position: 354-530
Cow position: chrX:34253668-34253843 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 147
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 0

Conread position: 354-537
Cow position: chrX:37080080-37079897 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 354-559
Cow position: chrX:36479196-36478990 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 354-578
Cow position: chrX:39730700-39730477 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 354-589
Cow position: chrX:5392136-5391901 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 191, 198

Conread position: 354-610
Cow position: chrX:29907763-29907507 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 207

Conread position: 354-634
Cow position: chrX:16808396-16808117 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 354-645
Cow position: chrX:6581373-6581664 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-662
Cow position: chrX:16086684-16086377 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 90

Conread position: 354-662
Cow position: chrX:17291369-17291677 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 354-663
Cow position: chrX:21662538-21662843 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 19

Conread position: 354-671
Cow position: chrX:18488275-18487958 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-690
Cow position: chrX:39185612-39185951 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-692
Cow position: chrX:2048551-2048889 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 52

Conread position: 354-692
Cow position: chrX:19399217-19399558 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-692
Cow position: chrX:28503775-28504106 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-693
Cow position: chrX:11716023-11715681 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-693
Cow position: chrX:22521782-22521440 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 354-693
Cow position: chrX:24447251-24447582 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 140

Conread position: 354-693
Cow position: chrX:27318670-27318997 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 98

Conread position: 354-693
Cow position: chrX:28752901-28752559 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-766
Cow position: chrX:30053029-30052607 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 9

Conread position: 354-776
Cow position: chrX:3417698-3417265 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 59

Conread position: 354-776
Cow position: chrX:26506502-26506070 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 202

Conread position: 354-777
Cow position: chrX:2932281-2931845 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-777
Cow position: chrX:6870124-6869689 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 354-777
Cow position: chrX:11145898-11145465 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 140

Conread position: 354-777
Cow position: chrX:14781907-14781472 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 354-777
Cow position: chrX:22612824-22613259 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 356

Conread position: 354-779
Cow position: chrX:24467686-24467249 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-779
Cow position: chrX:29169902-29169457 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 354-780
Cow position: chrX:6558289-6558731 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:362014-361573 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:1576824-1576383 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 212

Conread position: 354-782
Cow position: chrX:2559521-2559083 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:4343190-4343629 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 26

Conread position: 354-782
Cow position: chrX:5280414-5279977 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 412

Conread position: 354-782
Cow position: chrX:5289247-5288807 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 26

Conread position: 354-782
Cow position: chrX:5320280-5319836 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 156

Conread position: 354-782
Cow position: chrX:5408494-5408935 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:5646665-5646224 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:5866585-5867025 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 409

Conread position: 354-782
Cow position: chrX:6454135-6454575 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 167

Conread position: 354-782
Cow position: chrX:7119205-7118764 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:8483530-8483958 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 25

Conread position: 354-782
Cow position: chrX:9085894-9085453 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:9128495-9128936 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:10427979-10428419 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:10444976-10444534 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:10528335-10527895 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:11358626-11358185 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:12001708-12001267 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:12145541-12145974 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 67

Conread position: 354-782
Cow position: chrX:12458136-12458578 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 354-782
Cow position: chrX:14458728-14458289 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:14462748-14463193 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 354-782
Cow position: chrX:15091330-15090887 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 265

Conread position: 354-782
Cow position: chrX:15346530-15346089 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:16285650-16286089 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 213

Conread position: 354-782
Cow position: chrX:16478354-16478782 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:17055008-17055449 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 355

Conread position: 354-782
Cow position: chrX:17782938-17783379 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:17994898-17995339 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:18024479-18024919 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 229

Conread position: 354-782
Cow position: chrX:18222852-18223292 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:18462536-18462095 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:19022870-19022429 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:19109602-19109161 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:19473721-19473280 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 178

Conread position: 354-782
Cow position: chrX:21686058-21686494 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 199

Conread position: 354-782
Cow position: chrX:21768243-21768684 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:22568578-22568139 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:23109203-23109639 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 121

Conread position: 354-782
Cow position: chrX:24320833-24320396 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 409

Conread position: 354-782
Cow position: chrX:24413469-24413910 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 344

Conread position: 354-782
Cow position: chrX:24509306-24509747 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:27594741-27594302 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:27759146-27759587 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:29912778-29913219 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:30199553-30199112 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:30822023-30822464 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:30836812-30837253 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:31814450-31814009 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 355

Conread position: 354-782
Cow position: chrX:32039403-32038963 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 168

Conread position: 354-782
Cow position: chrX:32331070-32331507 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:33763783-33764224 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:34519165-34519606 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:35533290-35533731 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:36195531-36195972 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-782
Cow position: chrX:36535296-36534855 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 354-782
Cow position: chrX:36729823-36730264 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-782
Cow position: chrX:37816029-37816468 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 66

Conread position: 354-782
Cow position: chrX:37852578-37853011 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-784
Cow position: chrX:37764758-37764314 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-784
Cow position: chrX:37772995-37772550 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 354-787
Cow position: chrX:44168871-44168424 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 354-789
Cow position: chrX:13071165-13070715 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 203

Conread position: 354-789
Cow position: chrX:13091725-13091275 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 203

Conread position: 354-789
Cow position: chrX:41488726-41488278 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 355-657
Cow position: chrX:20953972-20954268 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 24

Conread position: 356-683
Cow position: chrX:4409000-4409339 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 194, 251

Conread position: 357-537
Cow position: chrX:12179117-12179297 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 133, 17

Conread position: 357-556
Cow position: chrX:13821311-13821509 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 33

Conread position: 357-680
Cow position: chrX:27772641-27772344 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 18, 116

Conread position: 357-761
Cow position: chrX:31777993-31777577 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 265
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 178, 124

Conread position: 357-1134
Cow position: chrX:41527070-41526288 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 169

Conread position: 358-488
Cow position: chrX:22564244-22564114 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 358-511
Cow position: chrX:32010512-32010359 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 126
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 358-515
Cow position: chrX:2500188-2500032 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 358-515
Cow position: chrX:29064856-29065013 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 131
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 358-516
Cow position: chrX:5331994-5331836 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 358-518
Cow position: chrX:31472822-31472982 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 358-569
Cow position: chrX:16514804-16514593 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 358-573
Cow position: chrX:29083521-29083737 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 358-629
Cow position: chrX:21595980-21596251 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 102

Conread position: 358-633
Cow position: chrX:37118340-37118623 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 123

Conread position: 358-641
Cow position: chrX:7288274-7288567 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 151

Conread position: 358-662
Cow position: chrX:23987986-23988284 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 358-662
Cow position: chrX:38961403-38961099 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 195

Conread position: 358-663
Cow position: chrX:6044046-6043737 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 174

Conread position: 358-663
Cow position: chrX:35440993-35441299 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 192, 37

Conread position: 358-678
Cow position: chrX:14030461-14030784 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 198

Conread position: 358-685
Cow position: chrX:28820179-28820512 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 63

Conread position: 358-692
Cow position: chrX:22603995-22603659 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 101

Conread position: 358-693
Cow position: chrX:11461428-11461091 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 181

Conread position: 358-693
Cow position: chrX:23341551-23341216 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 182

Conread position: 358-720
Cow position: chrX:28024706-28025070 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 194

Conread position: 358-723
Cow position: chrX:7677414-7677778 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 52

Conread position: 358-725
Cow position: chrX:5423623-5423254 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 195

Conread position: 358-725
Cow position: chrX:6372624-6372993 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 351

Conread position: 358-763
Cow position: chrX:2486187-2485772 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 174

Conread position: 358-765
Cow position: chrX:24173722-24173308 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 187

Conread position: 358-777
Cow position: chrX:671560-671136 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 46

Conread position: 358-777
Cow position: chrX:13928308-13927898 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 21

Conread position: 358-777
Cow position: chrX:40517032-40517451 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 276
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 31

Conread position: 358-779
Cow position: chrX:15439194-15438776 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 136

Conread position: 358-779
Cow position: chrX:28518277-28517848 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 22

Conread position: 358-780
Cow position: chrX:23316978-23316545 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 358-782
Cow position: chrX:2103848-2104281 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 420

Conread position: 358-782
Cow position: chrX:2160208-2160645 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 0

Conread position: 358-782
Cow position: chrX:2274360-2274797 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 194

Conread position: 358-782
Cow position: chrX:3464633-3464198 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 195

Conread position: 358-782
Cow position: chrX:4869002-4869423 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 62

Conread position: 358-782
Cow position: chrX:5334376-5333941 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 195

Conread position: 358-782
Cow position: chrX:7755344-7755781 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 194

Conread position: 358-782
Cow position: chrX:8641231-8641667 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 358-782
Cow position: chrX:9011770-9012207 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 0

Conread position: 358-782
Cow position: chrX:9169171-9168734 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 351

Conread position: 358-782
Cow position: chrX:14801375-14800938 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 195

Conread position: 358-782
Cow position: chrX:15173081-15172653 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 40

Conread position: 358-782
Cow position: chrX:16359566-16359135 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 208

Conread position: 358-782
Cow position: chrX:21343837-21344274 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 194

Conread position: 358-782
Cow position: chrX:26230073-26229634 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 221

Conread position: 358-782
Cow position: chrX:28559391-28558957 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 193

Conread position: 358-782
Cow position: chrX:39560209-39559773 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 195

Conread position: 358-782
Cow position: chrX:39713994-39714429 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 173

Conread position: 358-782
Cow position: chrX:42120746-42121183 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 194

Conread position: 358-782
Cow position: chrX:45903620-45904058 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 358-786
Cow position: chrX:24588011-24587569 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 0

Conread position: 358-793
Cow position: chrX:2524293-2523840 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 440

Conread position: 358-800
Cow position: chrX:7096901-7097355 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 194

Conread position: 358-824
Cow position: chrX:14819157-14819647 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 45

Conread position: 358-826
Cow position: chrX:41733752-41733260 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 142

Conread position: 358-853
Cow position: chrX:35937623-35937120 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 176

Conread position: 358-940
Cow position: chrX:40452777-40452171 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 73

Conread position: 358-985
Cow position: chrX:42733309-42733954 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 207

Conread position: 358-1047
Cow position: chrX:24424955-24424245 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 34

Conread position: 358-1068
Cow position: chrX:38227650-38226933 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 420

Conread position: 358-1112
Cow position: chrX:12249244-12250039 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 358-1116
Cow position: chrX:13912539-13913303 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 49

Conread position: 358-1125
Cow position: chrX:38963556-38964334 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 185

Conread position: 358-1127
Cow position: chrX:28633033-28632243 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 53

Conread position: 359-510
Cow position: chrX:8795920-8796068 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 359-518
Cow position: chrX:31570490-31570650 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 359-619
Cow position: chrX:18468214-18468478 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 188, 24

Conread position: 359-651
Cow position: chrX:9635809-9635516 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 359-654
Cow position: chrX:18988905-18989205 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 198, 139

Conread position: 359-656
Cow position: chrX:3211101-3210802 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 48

Conread position: 359-663
Cow position: chrX:4329638-4329332 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 37, 21

Conread position: 359-663
Cow position: chrX:9537986-9538291 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 54, 24

Conread position: 359-663
Cow position: chrX:21191314-21191626 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 33, 138

Conread position: 359-663
Cow position: chrX:21815610-21815917 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 89

Conread position: 359-665
Cow position: chrX:5648942-5648645 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 61

Conread position: 359-665
Cow position: chrX:10852174-10851868 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 202
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 157

Conread position: 359-679
Cow position: chrX:13430018-13429706 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 135

Conread position: 359-693
Cow position: chrX:31982184-31981845 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 224
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 51

Conread position: 359-697
Cow position: chrX:5070042-5069708 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 148, 20

Conread position: 359-714
Cow position: chrX:24951102-24950740 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 227
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 232

Conread position: 359-718
Cow position: chrX:23831997-23831642 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 145, 29

Conread position: 359-737
Cow position: chrX:42540043-42540436 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 26

Conread position: 359-760
Cow position: chrX:34866388-34865997 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 39

Conread position: 359-761
Cow position: chrX:17064742-17064333 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 262
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 63

Conread position: 359-777
Cow position: chrX:30085807-30085394 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 282
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 33

Conread position: 359-780
Cow position: chrX:2463252-2462835 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 61

Conread position: 359-782
Cow position: chrX:16279096-16279529 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 22

Conread position: 359-782
Cow position: chrX:30940625-30941061 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 193

Conread position: 359-792
Cow position: chrX:12465939-12466382 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 193

Conread position: 359-812
Cow position: chrX:12291804-12292264 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 313
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 303, 61

Conread position: 360-675
Cow position: chrX:8541911-8542232 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 110, 236

Conread position: 360-692
Cow position: chrX:18247794-18248119 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 20

Conread position: 360-693
Cow position: chrX:23819780-23819444 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 220
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 14

Conread position: 360-773
Cow position: chrX:33803572-33803144 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 34

Conread position: 360-782
Cow position: chrX:27404500-27404066 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 193

Conread position: 361-477
Cow position: chrX:28105057-28105174 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 94

Conread position: 361-549
Cow position: chrX:24202471-24202660 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 361-589
Cow position: chrX:9227635-9227407 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 361-689
Cow position: chrX:27098571-27098244 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 189, 32

Conread position: 361-734
Cow position: chrX:9837564-9837939 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 139

Conread position: 361-782
Cow position: chrX:31605130-31605564 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 191

Conread position: 361-820
Cow position: chrX:3396328-3395839 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 227

Conread position: 361-823
Cow position: chrX:28110941-28111433 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 116

Conread position: 361-831
Cow position: chrX:40121557-40121079 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 168

Conread position: 361-1140
Cow position: chrX:41790992-41790174 (view UCSC Genome Browser custom track)
Alignm length: 832
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 175

Conread position: 362-693
Cow position: chrX:39383634-39383298 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 12

Conread position: 363-472
Cow position: chrX:16527934-16528042 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 363-813
Cow position: chrX:9299399-9298917 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 363-1151
Cow position: chrX:7277381-7278166 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 131

Conread position: 364-591
Cow position: chrX:27395550-27395317 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 189, 0

Conread position: 364-646
Cow position: chrX:8518521-8518806 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 195, 229

Conread position: 365-814
Cow position: chrX:43648306-43647824 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 56

Conread position: 365-839
Cow position: chrX:32182586-32182087 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 139

Conread position: 366-841
Cow position: chrX:24125595-24125122 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 100

Conread position: 367-479
Cow position: chrX:25569044-25568933 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 367-762
Cow position: chrX:24529098-24529489 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 263
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 183, 25

Conread position: 367-782
Cow position: chrX:14122299-14121872 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 192

Conread position: 368-540
Cow position: chrX:22139791-22139618 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 368-663
Cow position: chrX:19878488-19878785 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 12

Conread position: 368-663
Cow position: chrX:25282037-25281736 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 226

Conread position: 368-681
Cow position: chrX:29031829-29032152 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 300

Conread position: 368-692
Cow position: chrX:2790689-2791020 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 21

Conread position: 368-693
Cow position: chrX:18799831-18799500 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 179, 15

Conread position: 368-792
Cow position: chrX:1331389-1331823 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 129

Conread position: 369-511
Cow position: chrX:14901614-14901472 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 114

Conread position: 369-515
Cow position: chrX:30484580-30484727 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 370-672
Cow position: chrX:40788606-40788917 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 15

Conread position: 370-680
Cow position: chrX:32623016-32623329 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 83

Conread position: 370-718
Cow position: chrX:25039035-25039392 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 109

Conread position: 370-761
Cow position: chrX:3121413-3121005 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 272
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 62

Conread position: 370-779
Cow position: chrX:44930095-44930510 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 136

Conread position: 371-593
Cow position: chrX:23908720-23908493 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 0

Conread position: 371-682
Cow position: chrX:16733292-16732977 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 11

Conread position: 371-761
Cow position: chrX:388962-389362 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 253
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 176, 137

Conread position: 371-761
Cow position: chrX:35832865-35833266 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 263
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 97

Conread position: 371-777
Cow position: chrX:27240192-27240611 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 285
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 187, 49

Conread position: 371-782
Cow position: chrX:24769404-24768984 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 371-787
Cow position: chrX:32094994-32094564 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 50

Conread position: 371-955
Cow position: chrX:34797490-34798074 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 372-558
Cow position: chrX:14924494-14924679 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 372-692
Cow position: chrX:22449372-22449694 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 8

Conread position: 372-713
Cow position: chrX:16345380-16345726 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 132, 11

Conread position: 372-780
Cow position: chrX:1550407-1550828 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 20

Conread position: 373-682
Cow position: chrX:42757105-42757425 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 373-691
Cow position: chrX:31460298-31460608 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 10

Conread position: 373-693
Cow position: chrX:22522373-22522050 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 179

Conread position: 373-931
Cow position: chrX:45992705-45993265 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 374-506
Cow position: chrX:31373058-31373190 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 374-506
Cow position: chrX:40581258-40581391 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 374-516
Cow position: chrX:20362675-20362533 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 374-518
Cow position: chrX:6019665-6019810 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 374-524
Cow position: chrX:46721538-46721386 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 374-576
Cow position: chrX:40559804-40559602 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 374-661
Cow position: chrX:41067295-41067585 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 19

Conread position: 374-663
Cow position: chrX:3582651-3582945 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 120

Conread position: 374-663
Cow position: chrX:23969816-23970106 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 374-680
Cow position: chrX:2146773-2147084 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 111

Conread position: 374-680
Cow position: chrX:5277459-5277151 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 176, 118

Conread position: 374-730
Cow position: chrX:10440381-10440013 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 19

Conread position: 374-775
Cow position: chrX:47368790-47368378 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 107

Conread position: 374-777
Cow position: chrX:502125-501714 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 220

Conread position: 374-777
Cow position: chrX:9438976-9439398 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 268
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 11

Conread position: 374-777
Cow position: chrX:18990315-18989927 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 295, 120

Conread position: 374-784
Cow position: chrX:19919131-19918712 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 277
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 22, 104

Conread position: 374-785
Cow position: chrX:32144703-32144280 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 102

Conread position: 374-790
Cow position: chrX:24888676-24888249 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 269
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 173, 211

Conread position: 374-803
Cow position: chrX:10416066-10415619 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 229

Conread position: 374-819
Cow position: chrX:37760311-37760772 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 316

Conread position: 374-824
Cow position: chrX:20504220-20504684 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 115

Conread position: 374-884
Cow position: chrX:3653234-3653753 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 14

Conread position: 374-969
Cow position: chrX:24105087-24105702 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 101

Conread position: 374-1068
Cow position: chrX:45373824-45373107 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 213

Conread position: 374-1112
Cow position: chrX:45430563-45429807 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 68

Conread position: 374-1116
Cow position: chrX:22115825-22115086 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 82

Conread position: 374-1125
Cow position: chrX:46533061-46532252 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 0

Conread position: 374-1133
Cow position: chrX:13178005-13177240 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 9

Conread position: 375-479
Cow position: chrX:125953-126057 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 375-656
Cow position: chrX:3813001-3813291 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 375-792
Cow position: chrX:39698787-39699214 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 182

Conread position: 375-1047
Cow position: chrX:45113094-45113776 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 296

Conread position: 376-519
Cow position: chrX:25848411-25848554 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 17

Conread position: 376-662
Cow position: chrX:22901204-22900912 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 376-663
Cow position: chrX:20675567-20675848 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 76

Conread position: 376-752
Cow position: chrX:3223587-3223203 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 322

Conread position: 377-663
Cow position: chrX:28993685-28993397 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 133, 69

Conread position: 377-678
Cow position: chrX:3596605-3596301 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 176

Conread position: 380-680
Cow position: chrX:35847681-35847981 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 103

Conread position: 380-710
Cow position: chrX:45200427-45200083 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 176, 112

Conread position: 380-766
Cow position: chrX:12853040-12852648 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 264
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 107, 21

Conread position: 383-516
Cow position: chrX:17889154-17889021 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 383-682
Cow position: chrX:48310917-48310610 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 239

Conread position: 383-777
Cow position: chrX:37128320-37128721 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 259
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 68, 139

Conread position: 383-782
Cow position: chrX:15531684-15531275 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 184

Conread position: 383-851
Cow position: chrX:20957483-20957957 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 248

Conread position: 383-857
Cow position: chrX:4123304-4123802 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 47

Conread position: 384-682
Cow position: chrX:42531027-42530715 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 384-782
Cow position: chrX:6196283-6195874 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 27

Conread position: 385-615
Cow position: chrX:11448633-11448398 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 162, 17

Conread position: 385-640
Cow position: chrX:38642490-38642750 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 194

Conread position: 385-665
Cow position: chrX:11115699-11115417 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 69

Conread position: 385-682
Cow position: chrX:46698606-46698305 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 111, 205

Conread position: 385-693
Cow position: chrX:158363-158053 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 63

Conread position: 385-725
Cow position: chrX:42459644-42459992 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 13

Conread position: 385-737
Cow position: chrX:24006354-24005994 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 166, 68

Conread position: 385-777
Cow position: chrX:23932761-23932366 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 258
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 286, 165

Conread position: 385-777
Cow position: chrX:33003722-33004129 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 262
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 166, 69

Conread position: 386-1112
Cow position: chrX:15007680-15006935 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 549

Conread position: 386-1124
Cow position: chrX:20340418-20339659 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 7

Conread position: 387-710
Cow position: chrX:5566351-5566015 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 142, 44

Conread position: 387-717
Cow position: chrX:10409615-10409275 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 163, 0

Conread position: 387-748
Cow position: chrX:24788239-24787878 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 115

Conread position: 387-806
Cow position: chrX:20383065-20382642 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 276

Conread position: 388-782
Cow position: chrX:6566547-6566954 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 164

Conread position: 388-782
Cow position: chrX:16074061-16074456 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 179

Conread position: 389-693
Cow position: chrX:12008206-12007901 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 28

Conread position: 389-775
Cow position: chrX:12111184-12110784 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 257
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 179, 244

Conread position: 389-777
Cow position: chrX:19742038-19741634 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 266
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 99, 374

Conread position: 389-777
Cow position: chrX:36294608-36295002 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 266
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 236

Conread position: 390-540
Cow position: chrX:46040726-46040877 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 390-777
Cow position: chrX:9651571-9651171 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 294

Conread position: 393-507
Cow position: chrX:1185623-1185737 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 393-573
Cow position: chrX:31435805-31435984 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 166, 0

Conread position: 393-672
Cow position: chrX:39294631-39294916 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 154, 83

Conread position: 393-693
Cow position: chrX:18152779-18152477 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 152, 51

Conread position: 393-693
Cow position: chrX:21973417-21973720 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 18

Conread position: 393-693
Cow position: chrX:27105410-27105105 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 154, 15

Conread position: 393-725
Cow position: chrX:48423413-48423747 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 316

Conread position: 393-777
Cow position: chrX:37105647-37106047 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 262
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 154, 194

Conread position: 393-782
Cow position: chrX:2418005-2417604 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 101

Conread position: 393-782
Cow position: chrX:22772133-22772535 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 159

Conread position: 393-782
Cow position: chrX:42591203-42591605 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 393-785
Cow position: chrX:4415328-4415723 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 68

Conread position: 394-677
Cow position: chrX:33707877-33708156 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 168, 100

Conread position: 394-710
Cow position: chrX:13460437-13460106 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 101

Conread position: 395-594
Cow position: chrX:38793976-38794177 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 99

Conread position: 395-601
Cow position: chrX:38584207-38584413 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 150, 157

Conread position: 395-616
Cow position: chrX:19333665-19333444 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 157

Conread position: 395-643
Cow position: chrX:39125791-39126048 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 83

Conread position: 395-665
Cow position: chrX:3471202-3471477 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 199

Conread position: 395-680
Cow position: chrX:30429868-30429560 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 49

Conread position: 395-692
Cow position: chrX:26844988-26845292 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 134, 25

Conread position: 395-693
Cow position: chrX:39316626-39316331 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 160, 76

Conread position: 395-693
Cow position: chrX:40717420-40717718 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 188, 134

Conread position: 395-756
Cow position: chrX:23218553-23218930 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 39, 71

Conread position: 395-766
Cow position: chrX:16354876-16354486 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 253
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 25

Conread position: 395-767
Cow position: chrX:3208080-3207699 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 7

Conread position: 395-767
Cow position: chrX:25205184-25205581 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 55, 66

Conread position: 395-1022
Cow position: chrX:42470456-42469810 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 53

Conread position: 395-1123
Cow position: chrX:31949449-31948699 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 81

Conread position: 396-1061
Cow position: chrX:40481389-40480695 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 104

Conread position: 397-690
Cow position: chrX:21765081-21765381 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 98

Conread position: 397-693
Cow position: chrX:20538761-20539051 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 108, 24

Conread position: 397-693
Cow position: chrX:27749527-27749228 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 0

Conread position: 397-1035
Cow position: chrX:4044362-4043723 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 16

Conread position: 398-538
Cow position: chrX:42380358-42380218 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 398-555
Cow position: chrX:24293215-24293063 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 398-761
Cow position: chrX:19636395-19636766 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 264
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 153, 111

Conread position: 398-761
Cow position: chrX:25150671-25151052 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 149, 42

Conread position: 398-822
Cow position: chrX:4156080-4155646 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 269
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 226, 160

Conread position: 398-881
Cow position: chrX:3154776-3154254 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 180

Conread position: 399-628
Cow position: chrX:30833944-30833709 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 110, 29

Conread position: 399-782
Cow position: chrX:25277015-25276619 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 154

Conread position: 400-555
Cow position: chrX:24174202-24174049 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 400-682
Cow position: chrX:38548892-38549181 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 107

Conread position: 400-772
Cow position: chrX:37014565-37014944 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 251
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 24

Conread position: 400-910
Cow position: chrX:32743030-32743557 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 99

Conread position: 401-810
Cow position: chrX:19595752-19596176 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 289
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 52

Conread position: 402-646
Cow position: chrX:21025553-21025311 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 140

Conread position: 402-665
Cow position: chrX:41754204-41754470 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 145, 29

Conread position: 402-782
Cow position: chrX:3157105-3157498 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 150

Conread position: 403-526
Cow position: chrX:15836185-15836063 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 403-693
Cow position: chrX:30093876-30093586 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 403-898
Cow position: chrX:25337690-25338193 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 16

Conread position: 404-541
Cow position: chrX:46824250-46824115 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 404-657
Cow position: chrX:46701599-46701351 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 84

Conread position: 404-932
Cow position: chrX:42994112-42994653 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 51

Conread position: 407-546
Cow position: chrX:41238826-41238689 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 407-680
Cow position: chrX:36557269-36557555 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 35, 95

Conread position: 410-515
Cow position: chrX:2963767-2963663 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 410-810
Cow position: chrX:3161518-3161099 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 101

Conread position: 410-1051
Cow position: chrX:5871812-5872477 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 111

Conread position: 411-515
Cow position: chrX:21666834-21666730 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 411-757
Cow position: chrX:19447857-19447492 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 136, 0

Conread position: 411-761
Cow position: chrX:17082913-17082550 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 146, 52

Conread position: 411-766
Cow position: chrX:529294-529661 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 145, 0

Conread position: 411-766
Cow position: chrX:25925057-25924675 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 184

Conread position: 411-777
Cow position: chrX:43789361-43788985 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 245
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 15

Conread position: 411-782
Cow position: chrX:14133973-14134355 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 17

Conread position: 411-782
Cow position: chrX:22077824-22078207 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 9

Conread position: 411-819
Cow position: chrX:17965020-17964596 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 121

Conread position: 412-662
Cow position: chrX:38934751-38935002 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 412-662
Cow position: chrX:38940873-38941124 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 412-734
Cow position: chrX:8325773-8326088 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 251, 97

Conread position: 412-773
Cow position: chrX:2351559-2351931 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 412-780
Cow position: chrX:3387603-3387984 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 140

Conread position: 412-823
Cow position: chrX:20976570-20976147 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 378

Conread position: 412-1103
Cow position: chrX:34238218-34238938 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 18

Conread position: 413-546
Cow position: chrX:7381758-7381892 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 413-780
Cow position: chrX:45786628-45787006 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 0

Conread position: 413-1116
Cow position: chrX:8869887-8869176 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 149

Conread position: 414-551
Cow position: chrX:40790031-40789896 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 414-663
Cow position: chrX:31745998-31745749 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 414-680
Cow position: chrX:12980848-12980583 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 0

Conread position: 414-777
Cow position: chrX:13030142-13029787 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 263

Conread position: 414-988
Cow position: chrX:27105757-27106356 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 517

Conread position: 414-1002
Cow position: chrX:35223802-35224407 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 6

Conread position: 414-1066
Cow position: chrX:34754693-34754001 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 495

Conread position: 415-539
Cow position: chrX:4795008-4794884 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 415-725
Cow position: chrX:12691159-12690848 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 283

Conread position: 415-782
Cow position: chrX:47317906-47318286 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 137

Conread position: 415-1152
Cow position: chrX:15232132-15231393 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 416-610
Cow position: chrX:31251766-31251960 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 416-693
Cow position: chrX:19022942-19023200 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 417-539
Cow position: chrX:20789244-20789124 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 417-598
Cow position: chrX:18215433-18215615 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 101, 0

Conread position: 417-634
Cow position: chrX:48013985-48014214 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 46

Conread position: 417-647
Cow position: chrX:36133709-36133479 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 174

Conread position: 417-692
Cow position: chrX:37572666-37572944 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 417-1116
Cow position: chrX:34532033-34532739 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 397

Conread position: 418-775
Cow position: chrX:42841554-42841180 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 142, 10

Conread position: 418-1086
Cow position: chrX:13648281-13647586 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 405

Conread position: 419-693
Cow position: chrX:35694543-35694826 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 126

Conread position: 419-1116
Cow position: chrX:9252667-9251935 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 113

Conread position: 420-690
Cow position: chrX:43980250-43980529 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 142, 232

Conread position: 420-692
Cow position: chrX:15379879-15380160 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 131, 257

Conread position: 420-761
Cow position: chrX:4566425-4566070 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 169

Conread position: 420-762
Cow position: chrX:32803361-32803035 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 293, 126

Conread position: 420-773
Cow position: chrX:21862165-21861801 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 188

Conread position: 420-881
Cow position: chrX:16790312-16789861 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 140

Conread position: 420-932
Cow position: chrX:12115546-12116087 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 517

Conread position: 420-1116
Cow position: chrX:12437727-12437055 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 21

Conread position: 421-1113
Cow position: chrX:47873822-47873111 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 21

Conread position: 422-541
Cow position: chrX:11844857-11844739 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 422-680
Cow position: chrX:38840357-38840626 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 13

Conread position: 422-782
Cow position: chrX:24969309-24968936 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 423-761
Cow position: chrX:18684287-18684632 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 116

Conread position: 423-777
Cow position: chrX:626533-626170 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 35

Conread position: 424-779
Cow position: chrX:26787834-26788199 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 236
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 121, 22

Conread position: 424-779
Cow position: chrX:29864922-29864555 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 0

Conread position: 424-782
Cow position: chrX:5599469-5599098 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 129

Conread position: 425-693
Cow position: chrX:15591112-15591386 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 177
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 86

Conread position: 425-761
Cow position: chrX:38832401-38832070 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 191, 56

Conread position: 426-663
Cow position: chrX:47243794-47243555 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 160

Conread position: 426-692
Cow position: chrX:13266319-13266044 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 79

Conread position: 426-1102
Cow position: chrX:35272878-35273586 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 176

Conread position: 429-515
Cow position: chrX:42247901-42247815 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 429-585
Cow position: chrX:777028-777185 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 429-655
Cow position: chrX:28214848-28215079 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 88

Conread position: 429-663
Cow position: chrX:25425647-25425886 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 118, 166

Conread position: 429-682
Cow position: chrX:11455553-11455302 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 429-712
Cow position: chrX:26728369-26728652 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 123

Conread position: 429-761
Cow position: chrX:23514961-23514614 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 128, 52

Conread position: 429-782
Cow position: chrX:43510930-43511299 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 429-818
Cow position: chrX:9403616-9404031 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 284
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 168

Conread position: 431-598
Cow position: chrX:29859431-29859264 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 431-761
Cow position: chrX:16229461-16229118 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 119, 94

Conread position: 431-777
Cow position: chrX:27760857-27761215 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 79

Conread position: 431-782
Cow position: chrX:37403507-37403142 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 122

Conread position: 433-1112
Cow position: chrX:14974220-14973533 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 232

Conread position: 434-692
Cow position: chrX:31385236-31385495 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 235

Conread position: 434-860
Cow position: chrX:18551425-18551851 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 111, 118

Conread position: 434-1104
Cow position: chrX:15596571-15597244 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 64

Conread position: 436-663
Cow position: chrX:42381908-42381680 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 99

Conread position: 436-824
Cow position: chrX:21319213-21319607 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 194

Conread position: 437-677
Cow position: chrX:22590762-22591000 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 52

Conread position: 437-777
Cow position: chrX:44086826-44087180 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 123

Conread position: 437-780
Cow position: chrX:16713719-16714075 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 110, 115

Conread position: 437-809
Cow position: chrX:28516314-28515937 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 254
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 110, 38

Conread position: 437-818
Cow position: chrX:24193639-24194031 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 268
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 223, 39

Conread position: 437-1053
Cow position: chrX:18695403-18694770 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 56

Conread position: 438-1015
Cow position: chrX:36219059-36219650 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 384
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 226, 56

Conread position: 439-693
Cow position: chrX:31342722-31342967 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 439-760
Cow position: chrX:28855020-28855349 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 213
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 150

Conread position: 439-860
Cow position: chrX:48287907-48287482 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 127

Conread position: 439-1112
Cow position: chrX:17794517-17795203 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 234

Conread position: 440-644
Cow position: chrX:33799423-33799623 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 440-736
Cow position: chrX:47654829-47655132 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 440-767
Cow position: chrX:5127454-5127780 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 118, 58

Conread position: 440-1015
Cow position: chrX:16706324-16706923 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 112

Conread position: 440-1105
Cow position: chrX:13868230-13868921 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 51

Conread position: 441-940
Cow position: chrX:48243925-48243417 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 53

Conread position: 442-777
Cow position: chrX:41306107-41305760 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 443-779
Cow position: chrX:8926242-8926593 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 107, 197

Conread position: 443-1054
Cow position: chrX:27516065-27516683 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 10

Conread position: 444-610
Cow position: chrX:21794463-21794624 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 101, 50

Conread position: 444-639
Cow position: chrX:16049238-16049437 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 104, 88

Conread position: 444-682
Cow position: chrX:22623981-22624223 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 112, 0

Conread position: 444-819
Cow position: chrX:25302206-25301827 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 190, 50

Conread position: 445-761
Cow position: chrX:39288645-39288311 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 446-782
Cow position: chrX:28058263-28057915 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 447-691
Cow position: chrX:24260081-24259833 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 124, 232

Conread position: 447-730
Cow position: chrX:38067181-38066887 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 448-738
Cow position: chrX:47965466-47965151 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 85

Conread position: 448-938
Cow position: chrX:32128461-32127946 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 409

Conread position: 449-881
Cow position: chrX:30162544-30162988 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 319
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 117, 32

Conread position: 450-679
Cow position: chrX:27679886-27680128 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 93, 0

Conread position: 452-782
Cow position: chrX:1781442-1781785 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 100

Conread position: 452-782
Cow position: chrX:34413313-34413656 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 100

Conread position: 453-622
Cow position: chrX:42281935-42282111 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 453-761
Cow position: chrX:24169782-24169458 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 141

Conread position: 453-761
Cow position: chrX:40322451-40322773 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 72

Conread position: 453-999
Cow position: chrX:40180333-40179771 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 440

Conread position: 453-1027
Cow position: chrX:917839-917232 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 384

Conread position: 455-693
Cow position: chrX:11377109-11377354 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 103, 185

Conread position: 455-782
Cow position: chrX:7311533-7311873 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 455-782
Cow position: chrX:11663718-11664058 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 97

Conread position: 455-782
Cow position: chrX:30981628-30981285 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 101

Conread position: 455-782
Cow position: chrX:34285524-34285183 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 455-813
Cow position: chrX:27019745-27020111 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 149

Conread position: 456-815
Cow position: chrX:23696881-23696489 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 176

Conread position: 456-1127
Cow position: chrX:45501685-45502375 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 376

Conread position: 457-761
Cow position: chrX:39952800-39952494 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 222

Conread position: 458-663
Cow position: chrX:4553899-4554120 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 458-693
Cow position: chrX:42530363-42530130 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 458-777
Cow position: chrX:13922985-13923289 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 204, 46

Conread position: 458-782
Cow position: chrX:27626898-27627235 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 459-668
Cow position: chrX:27002204-27002412 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 54

Conread position: 459-824
Cow position: chrX:24200739-24201114 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 118

Conread position: 460-782
Cow position: chrX:6652526-6652192 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 34

Conread position: 461-693
Cow position: chrX:16222172-16222406 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 91

Conread position: 461-841
Cow position: chrX:35633208-35632805 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 56

Conread position: 461-985
Cow position: chrX:23299501-23300052 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 107

Conread position: 462-782
Cow position: chrX:7444631-7444963 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 326

Conread position: 462-1068
Cow position: chrX:24288366-24287757 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 259

Conread position: 463-636
Cow position: chrX:30729950-30729775 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 97, 17

Conread position: 463-678
Cow position: chrX:45566156-45566374 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 201, 0

Conread position: 463-782
Cow position: chrX:11672329-11672661 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 463-940
Cow position: chrX:8899573-8900074 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 102

Conread position: 464-1116
Cow position: chrX:38094976-38094298 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 287

Conread position: 464-1124
Cow position: chrX:23564248-23563554 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 444

Conread position: 465-763
Cow position: chrX:1947171-1946862 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 198, 0

Conread position: 465-1038
Cow position: chrX:3130116-3130718 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 29

Conread position: 466-627
Cow position: chrX:19210844-19210678 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 94, 28

Conread position: 466-657
Cow position: chrX:39015607-39015421 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 466-682
Cow position: chrX:41884885-41884670 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 33, 27

Conread position: 466-792
Cow position: chrX:18118920-18118583 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 101

Conread position: 467-646
Cow position: chrX:9072766-9072950 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 27

Conread position: 467-736
Cow position: chrX:42222016-42221741 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 273

Conread position: 467-767
Cow position: chrX:13686270-13686578 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 197, 14

Conread position: 467-792
Cow position: chrX:2945318-2944979 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 468-624
Cow position: chrX:20709586-20709747 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 86, 26

Conread position: 469-881
Cow position: chrX:21666037-21665603 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 179

Conread position: 470-680
Cow position: chrX:1729020-1728803 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 86, 29

Conread position: 470-766
Cow position: chrX:37575865-37576178 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 470-818
Cow position: chrX:160484-160111 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 28

Conread position: 470-823
Cow position: chrX:36692794-36693165 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 106, 89

Conread position: 470-884
Cow position: chrX:38936247-38936691 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 24

Conread position: 471-761
Cow position: chrX:19320141-19320445 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 83, 23

Conread position: 471-782
Cow position: chrX:7742901-7742577 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 74, 82

Conread position: 472-663
Cow position: chrX:40035912-40035723 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 0

Conread position: 472-782
Cow position: chrX:13396694-13396372 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 42

Conread position: 473-948
Cow position: chrX:10438093-10437610 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 209

Conread position: 473-1120
Cow position: chrX:28847324-28846661 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 428

Conread position: 474-723
Cow position: chrX:43049681-43049917 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 237, 31

Conread position: 474-1057
Cow position: chrX:28133908-28134504 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 431

Conread position: 475-779
Cow position: chrX:13384967-13385284 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 77

Conread position: 475-782
Cow position: chrX:23139873-23140190 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 77

Conread position: 475-782
Cow position: chrX:47607973-47608294 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 79

Conread position: 476-693
Cow position: chrX:30134928-30134705 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 476-1023
Cow position: chrX:37231972-37232539 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 350

Conread position: 477-693
Cow position: chrX:41377173-41377389 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 75

Conread position: 477-809
Cow position: chrX:40515467-40515808 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 83, 45

Conread position: 477-1054
Cow position: chrX:5017842-5017262 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 32

Conread position: 481-717
Cow position: chrX:16530487-16530733 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 198

Conread position: 482-663
Cow position: chrX:12756369-12756187 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 12

Conread position: 485-679
Cow position: chrX:31338509-31338707 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 122

Conread position: 485-779
Cow position: chrX:17980165-17980472 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 67

Conread position: 485-782
Cow position: chrX:13447840-13448150 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 60, 67

Conread position: 485-782
Cow position: chrX:20321197-20320888 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 87, 81

Conread position: 485-782
Cow position: chrX:24809400-24809091 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 179, 224

Conread position: 485-782
Cow position: chrX:46579285-46578975 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 485-909
Cow position: chrX:36840431-36840889 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 405

Conread position: 485-987
Cow position: chrX:26441210-26440689 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 429

Conread position: 487-782
Cow position: chrX:19674220-19674528 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 65

Conread position: 488-1015
Cow position: chrX:25568806-25568266 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 343
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 60, 65

Conread position: 489-761
Cow position: chrX:23034465-23034753 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 8

Conread position: 490-663
Cow position: chrX:16284405-16284226 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 490-666
Cow position: chrX:41682930-41683112 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 490-760
Cow position: chrX:37544517-37544803 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 490-818
Cow position: chrX:24886913-24886583 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 172, 61

Conread position: 490-823
Cow position: chrX:25966624-25966968 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 226

Conread position: 490-1115
Cow position: chrX:15486050-15485406 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 428

Conread position: 491-635
Cow position: chrX:11590046-11589904 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 491-656
Cow position: chrX:16689107-16689272 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 491-663
Cow position: chrX:45448232-45448404 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 491-682
Cow position: chrX:20167729-20167924 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 491-687
Cow position: chrX:44206861-44207054 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 168, 18

Conread position: 491-693
Cow position: chrX:3079011-3078806 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 54, 62

Conread position: 491-755
Cow position: chrX:17887942-17888209 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 54

Conread position: 491-773
Cow position: chrX:6654741-6654433 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 491-777
Cow position: chrX:9970498-9970791 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 191

Conread position: 491-780
Cow position: chrX:12810690-12810996 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 15

Conread position: 491-782
Cow position: chrX:14134757-14135061 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 173, 0

Conread position: 491-782
Cow position: chrX:23047356-23047658 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 61

Conread position: 491-786
Cow position: chrX:24102555-24102864 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 21

Conread position: 491-791
Cow position: chrX:12096670-12096361 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 92

Conread position: 491-818
Cow position: chrX:10916324-10916671 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 277

Conread position: 491-851
Cow position: chrX:48370671-48371055 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 338

Conread position: 491-870
Cow position: chrX:38967227-38967628 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 156

Conread position: 491-873
Cow position: chrX:39556240-39555854 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 27

Conread position: 491-880
Cow position: chrX:48247261-48246860 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 150

Conread position: 491-884
Cow position: chrX:19019519-19019111 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 186

Conread position: 491-1063
Cow position: chrX:14599112-14599704 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 118

Conread position: 494-666
Cow position: chrX:1332456-1332278 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 494-682
Cow position: chrX:39071263-39071451 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 177, 58

Conread position: 494-782
Cow position: chrX:11975908-11975615 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 169, 215

Conread position: 494-782
Cow position: chrX:19495381-19495080 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 59

Conread position: 494-819
Cow position: chrX:17271704-17271362 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 34

Conread position: 494-1026
Cow position: chrX:42171720-42171162 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 342

Conread position: 494-1054
Cow position: chrX:43730612-43730061 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 54

Conread position: 494-1112
Cow position: chrX:21626381-21625724 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 424

Conread position: 495-678
Cow position: chrX:32419770-32419952 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 152
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 88, 9

Conread position: 495-682
Cow position: chrX:22284088-22284281 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 495-766
Cow position: chrX:40581566-40581852 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 25

Conread position: 495-776
Cow position: chrX:42142053-42141767 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 235

Conread position: 495-1104
Cow position: chrX:1616477-1615842 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 342

Conread position: 496-680
Cow position: chrX:15344004-15344193 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 11

Conread position: 496-782
Cow position: chrX:38442543-38442842 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 56

Conread position: 496-785
Cow position: chrX:19772038-19771746 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 182

Conread position: 496-1137
Cow position: chrX:21063879-21064534 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 18

Conread position: 497-679
Cow position: chrX:38641783-38641960 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 166, 50

Conread position: 497-711
Cow position: chrX:36351455-36351670 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 56

Conread position: 498-794
Cow position: chrX:47219672-47219364 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 163, 294

Conread position: 498-807
Cow position: chrX:15341449-15341134 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 85, 42

Conread position: 499-643
Cow position: chrX:16416046-16416195 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 38

Conread position: 499-656
Cow position: chrX:28878671-28878513 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 61

Conread position: 499-925
Cow position: chrX:11581521-11581966 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 92

Conread position: 500-680
Cow position: chrX:34663275-34663095 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 175

Conread position: 500-782
Cow position: chrX:45467635-45467339 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 164, 0

Conread position: 500-783
Cow position: chrX:2362083-2362380 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 9, 53

Conread position: 501-693
Cow position: chrX:34006899-34007094 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 163, 0

Conread position: 501-782
Cow position: chrX:32010617-32010911 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 501-785
Cow position: chrX:38577118-38577411 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 184

Conread position: 502-777
Cow position: chrX:21495345-21495633 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 165, 0

Conread position: 502-777
Cow position: chrX:37377673-37377393 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 61

Conread position: 503-663
Cow position: chrX:6277873-6277708 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 91

Conread position: 503-693
Cow position: chrX:36373131-36373325 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 50

Conread position: 503-729
Cow position: chrX:5856929-5856691 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 20

Conread position: 504-633
Cow position: chrX:48021002-48020872 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 504-662
Cow position: chrX:14050395-14050553 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 41, 48

Conread position: 504-782
Cow position: chrX:10992207-10992498 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 48

Conread position: 504-1116
Cow position: chrX:42247592-42246953 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 62

Conread position: 505-625
Cow position: chrX:42242883-42242764 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 505-682
Cow position: chrX:4943417-4943238 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 173

Conread position: 505-767
Cow position: chrX:17282405-17282127 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 272

Conread position: 505-824
Cow position: chrX:48224598-48224256 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 505-1049
Cow position: chrX:17888798-17888265 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 129

Conread position: 505-1051
Cow position: chrX:8796841-8797409 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 505-1127
Cow position: chrX:20888054-20887410 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 250

Conread position: 506-732
Cow position: chrX:43199021-43199263 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 506-893
Cow position: chrX:25946249-25945828 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 18

Conread position: 506-1137
Cow position: chrX:15147591-15146947 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 63

Conread position: 507-777
Cow position: chrX:16529597-16529880 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 41, 52

Conread position: 507-779
Cow position: chrX:2499747-2499463 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 163, 25

Conread position: 507-782
Cow position: chrX:828472-828771 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 160

Conread position: 507-1116
Cow position: chrX:34376546-34377167 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 67

Conread position: 507-1157
Cow position: chrX:39174621-39173945 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 385

Conread position: 509-657
Cow position: chrX:4177651-4177798 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 509-679
Cow position: chrX:7341398-7341573 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 23

Conread position: 509-778
Cow position: chrX:14409794-14409511 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 509-782
Cow position: chrX:15504885-15505171 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 43

Conread position: 509-830
Cow position: chrX:25452144-25452481 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 154, 109

Conread position: 510-649
Cow position: chrX:14901390-14901246 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 71

Conread position: 510-896
Cow position: chrX:42587834-42587423 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 280
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 153, 317

Conread position: 510-947
Cow position: chrX:34192277-34192726 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 22

Conread position: 510-1033
Cow position: chrX:23583153-23583705 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 409

Conread position: 511-663
Cow position: chrX:41083499-41083653 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 511-1015
Cow position: chrX:15590276-15589750 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 403

Conread position: 512-782
Cow position: chrX:10495830-10496113 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 33, 40

Conread position: 512-782
Cow position: chrX:12776389-12776106 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 152, 0

Conread position: 512-782
Cow position: chrX:29066049-29066317 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 182, 118

Conread position: 512-782
Cow position: chrX:44557676-44557959 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 155, 0

Conread position: 512-1112
Cow position: chrX:6413643-6414256 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 235

Conread position: 513-663
Cow position: chrX:33519177-33519327 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 125
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 82, 89

Conread position: 513-665
Cow position: chrX:45599301-45599149 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 513-693
Cow position: chrX:10831914-10831731 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 150
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 39, 35

Conread position: 513-767
Cow position: chrX:29723049-29723311 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 243

Conread position: 513-852
Cow position: chrX:45674442-45674807 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 119

Conread position: 513-974
Cow position: chrX:42508046-42507565 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 513-1014
Cow position: chrX:44737393-44736878 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 347
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 149, 373

Conread position: 513-1015
Cow position: chrX:7054134-7053612 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 353
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 156, 55

Conread position: 513-1029
Cow position: chrX:30543689-30543146 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 514-663
Cow position: chrX:44839781-44839930 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 514-775
Cow position: chrX:36678074-36677799 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 79

Conread position: 514-778
Cow position: chrX:22325672-22325950 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 43, 9

Conread position: 514-782
Cow position: chrX:9593536-9593255 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 150, 0

Conread position: 514-787
Cow position: chrX:19196919-19196633 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 146, 0

Conread position: 514-831
Cow position: chrX:31450021-31449682 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 150, 34

Conread position: 514-1112
Cow position: chrX:22821013-22821661 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 423
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 403

Conread position: 515-663
Cow position: chrX:48221322-48221174 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 515-700
Cow position: chrX:17010702-17010513 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 38

Conread position: 515-799
Cow position: chrX:37205313-37205627 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 33, 243

Conread position: 516-712
Cow position: chrX:38668039-38667833 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 516-820
Cow position: chrX:21795096-21795420 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 47

Conread position: 516-830
Cow position: chrX:32584210-32583874 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 151, 51

Conread position: 516-931
Cow position: chrX:126386-126811 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 313

Conread position: 516-1015
Cow position: chrX:21749857-21749338 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 100

Conread position: 517-817
Cow position: chrX:44907918-44908240 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 152, 119

Conread position: 517-1015
Cow position: chrX:23024305-23024833 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 343
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 169

Conread position: 519-822
Cow position: chrX:48248423-48248751 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 311

Conread position: 521-670
Cow position: chrX:46721184-46721030 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 521-690
Cow position: chrX:12671881-12671709 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 27, 32

Conread position: 521-782
Cow position: chrX:5112950-5112676 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 143, 0

Conread position: 521-782
Cow position: chrX:15561209-15560934 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 143, 188

Conread position: 521-782
Cow position: chrX:20617191-20616917 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 143, 0

Conread position: 521-785
Cow position: chrX:40602570-40602845 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 29, 40

Conread position: 521-792
Cow position: chrX:6655660-6655376 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 146, 62

Conread position: 522-780
Cow position: chrX:25741507-25741236 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 141, 0

Conread position: 522-826
Cow position: chrX:32978650-32978323 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 236

Conread position: 522-918
Cow position: chrX:32309701-32310131 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 299
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 328

Conread position: 524-682
Cow position: chrX:27288139-27287975 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 524-1054
Cow position: chrX:34401607-34402168 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 112

Conread position: 525-793
Cow position: chrX:40142590-40142311 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 209

Conread position: 525-1112
Cow position: chrX:38218328-38218937 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 194

Conread position: 526-792
Cow position: chrX:21062828-21063105 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 141, 99

Conread position: 527-782
Cow position: chrX:43979230-43979498 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 137, 0

Conread position: 527-884
Cow position: chrX:39700825-39701217 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 18, 314

Conread position: 527-1124
Cow position: chrX:2300537-2301161 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 299

Conread position: 528-780
Cow position: chrX:34095174-34095439 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 17, 25

Conread position: 528-831
Cow position: chrX:32188746-32188423 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 135, 239

Conread position: 529-782
Cow position: chrX:23235444-23235710 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 24

Conread position: 531-808
Cow position: chrX:31373194-31373478 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 121

Conread position: 532-711
Cow position: chrX:41198703-41198882 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 144, 157

Conread position: 532-945
Cow position: chrX:7718469-7718903 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 296

Conread position: 532-1128
Cow position: chrX:16722200-16721549 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 426
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 343

Conread position: 533-782
Cow position: chrX:44851709-44851974 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 20

Conread position: 535-1029
Cow position: chrX:47054891-47054387 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 341
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 179, 31

Conread position: 536-663
Cow position: chrX:10394265-10394391 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 536-671
Cow position: chrX:45228438-45228305 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 536-1125
Cow position: chrX:25035765-25035145 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 124

Conread position: 537-766
Cow position: chrX:17691883-17692122 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 126, 51

Conread position: 537-930
Cow position: chrX:41743535-41743952 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 373

Conread position: 538-992
Cow position: chrX:19290395-19290863 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 310
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 124, 304

Conread position: 538-1015
Cow position: chrX:16289939-16289437 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 332
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 132, 371

Conread position: 541-676
Cow position: chrX:41167402-41167269 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 542-1116
Cow position: chrX:31250019-31250618 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 78

Conread position: 545-682
Cow position: chrX:1514796-1514656 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 13

Conread position: 547-782
Cow position: chrX:30950160-30950408 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 117, 0

Conread position: 547-945
Cow position: chrX:28105558-28105972 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 88

Conread position: 547-1054
Cow position: chrX:11718146-11717618 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 40

Conread position: 547-1068
Cow position: chrX:34502555-34503104 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 276

Conread position: 548-656
Cow position: chrX:41673508-41673617 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 548-668
Cow position: chrX:22866887-22866767 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 548-693
Cow position: chrX:11583509-11583365 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 5

Conread position: 548-773
Cow position: chrX:5292257-5292021 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 10

Conread position: 550-779
Cow position: chrX:5640984-5640760 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 123

Conread position: 550-782
Cow position: chrX:15578006-15577761 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 114, 0

Conread position: 550-810
Cow position: chrX:31058795-31059061 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 22, 130

Conread position: 551-658
Cow position: chrX:40183999-40183892 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 551-671
Cow position: chrX:11412151-11412031 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 551-682
Cow position: chrX:46044656-46044784 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 551-692
Cow position: chrX:1823698-1823842 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 0

Conread position: 551-692
Cow position: chrX:19842246-19842106 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 551-693
Cow position: chrX:48490248-48490106 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 551-761
Cow position: chrX:32214825-32214614 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 26

Conread position: 551-775
Cow position: chrX:47362250-47362015 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 551-777
Cow position: chrX:22578524-22578293 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 143, 66

Conread position: 551-777
Cow position: chrX:30141689-30141450 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 551-777
Cow position: chrX:39386629-39386391 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 118, 0

Conread position: 551-779
Cow position: chrX:27616474-27616709 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 143, 122

Conread position: 551-779
Cow position: chrX:48328751-48328510 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 551-780
Cow position: chrX:9096303-9096544 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 551-780
Cow position: chrX:36240031-36240271 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chrX:6828771-6829016 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 551-782
Cow position: chrX:7509773-7510016 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 113, 237

Conread position: 551-782
Cow position: chrX:29508419-29508657 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chrX:30538516-30538272 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chrX:30863563-30863319 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chrX:30899752-30899507 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 551-782
Cow position: chrX:36479568-36479812 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chrX:37497811-37497567 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chrX:39548966-39549210 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 113, 0

Conread position: 551-782
Cow position: chrX:44980401-44980158 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 551-782
Cow position: chrX:48165159-48165403 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 551-785
Cow position: chrX:27982509-27982264 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 117, 0

Conread position: 551-792
Cow position: chrX:45399862-45399609 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 551-830
Cow position: chrX:12179604-12179900 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 116, 0

Conread position: 551-1015
Cow position: chrX:40648302-40648774 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 218

Conread position: 551-1022
Cow position: chrX:46606862-46606377 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 327
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 37

Conread position: 551-1048
Cow position: chrX:20697967-20697454 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 124

Conread position: 551-1102
Cow position: chrX:47343928-47344513 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 302

Conread position: 551-1142
Cow position: chrX:30338283-30337699 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 62

Conread position: 551-1150
Cow position: chrX:11844602-11843972 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 200

Conread position: 552-777
Cow position: chrX:10718147-10718384 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 552-782
Cow position: chrX:5739576-5739333 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 112, 0

Conread position: 552-782
Cow position: chrX:43767899-43767657 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 112, 16

Conread position: 552-782
Cow position: chrX:47386294-47386052 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 552-819
Cow position: chrX:25283503-25283226 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 110

Conread position: 552-825
Cow position: chrX:11981757-11982062 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 286

Conread position: 552-837
Cow position: chrX:48227982-48227668 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 552-999
Cow position: chrX:4864915-4865341 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 297
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 159, 49

Conread position: 553-691
Cow position: chrX:20787572-20787438 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 553-693
Cow position: chrX:20038580-20038437 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 553-813
Cow position: chrX:6659013-6659297 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 72

Conread position: 553-884
Cow position: chrX:2786908-2786564 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 285

Conread position: 553-908
Cow position: chrX:25848553-25848930 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 276

Conread position: 553-1046
Cow position: chrX:11614359-11614847 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 197

Conread position: 553-1063
Cow position: chrX:630655-630138 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 349
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 158, 50

Conread position: 554-693
Cow position: chrX:40321266-40321410 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 554-839
Cow position: chrX:11806377-11806069 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 115, 75

Conread position: 554-898
Cow position: chrX:25419521-25419149 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 117, 0

Conread position: 554-1113
Cow position: chrX:5118844-5118273 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 190

Conread position: 554-1116
Cow position: chrX:33855601-33854998 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 78

Conread position: 554-1124
Cow position: chrX:7178551-7179120 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 181

Conread position: 555-667
Cow position: chrX:6262791-6262679 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-668
Cow position: chrX:16542066-16541953 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-693
Cow position: chrX:45263428-45263287 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 555-780
Cow position: chrX:29877541-29877303 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 555-782
Cow position: chrX:39731153-39731393 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 109, 0

Conread position: 555-793
Cow position: chrX:22873037-22873288 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 112, 0

Conread position: 555-823
Cow position: chrX:7381964-7382251 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 76

Conread position: 556-693
Cow position: chrX:14009012-14008872 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 556-782
Cow position: chrX:35612903-35612665 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 108, 125

Conread position: 556-857
Cow position: chrX:44731241-44731562 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 140, 111

Conread position: 556-872
Cow position: chrX:37843361-37843703 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 322

Conread position: 557-1014
Cow position: chrX:20029889-20030377 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 318
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 351

Conread position: 559-925
Cow position: chrX:10306314-10306708 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 372

Conread position: 560-780
Cow position: chrX:24966914-24967147 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 560-830
Cow position: chrX:5808854-5809131 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 18

Conread position: 560-1021
Cow position: chrX:19689860-19690345 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 561-704
Cow position: chrX:47177949-47177802 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 561-819
Cow position: chrX:28787017-28787275 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 108, 34

Conread position: 561-833
Cow position: chrX:32747304-32747585 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 106, 235

Conread position: 561-1063
Cow position: chrX:36010246-36009741 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 327
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 102, 192

Conread position: 562-686
Cow position: chrX:32012409-32012283 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 562-777
Cow position: chrX:34333553-34333325 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 562-782
Cow position: chrX:44387637-44387865 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 130, 98

Conread position: 562-1016
Cow position: chrX:45945280-45945722 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 299
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 132, 191

Conread position: 562-1070
Cow position: chrX:20945215-20945745 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 349
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 105, 204

Conread position: 563-782
Cow position: chrX:14846426-14846194 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 563-824
Cow position: chrX:37299240-37299516 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 57, 235

Conread position: 563-1003
Cow position: chrX:47967248-47967719 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 563-1015
Cow position: chrX:48205265-48204794 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 296
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 100, 342

Conread position: 564-782
Cow position: chrX:22567179-22567412 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 564-1068
Cow position: chrX:46771323-46770786 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 348

Conread position: 567-807
Cow position: chrX:24231467-24231215 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 68

Conread position: 567-884
Cow position: chrX:25232238-25232585 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 261

Conread position: 568-667
Cow position: chrX:26883496-26883397 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 568-766
Cow position: chrX:37079886-37079677 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 568-766
Cow position: chrX:39954885-39954676 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 568-777
Cow position: chrX:21255690-21255911 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 568-779
Cow position: chrX:9227331-9227105 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 568-782
Cow position: chrX:11860589-11860362 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 568-782
Cow position: chrX:35803467-35803694 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 568-1039
Cow position: chrX:32171229-32170741 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 196

Conread position: 568-1109
Cow position: chrX:31436133-31436690 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 254

Conread position: 568-1112
Cow position: chrX:44396673-44397235 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 376
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 104, 255

Conread position: 568-1116
Cow position: chrX:29048686-29049266 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 20

Conread position: 569-692
Cow position: chrX:23091460-23091583 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 569-761
Cow position: chrX:12640952-12641144 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 98

Conread position: 570-680
Cow position: chrX:9417098-9416985 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 570-693
Cow position: chrX:45851586-45851713 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 570-772
Cow position: chrX:21844289-21844505 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 570-932
Cow position: chrX:18999553-18999928 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 139

Conread position: 571-720
Cow position: chrX:20954260-20954412 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 571-782
Cow position: chrX:11725611-11725383 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 571-782
Cow position: chrX:24758041-24757817 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 571-1023
Cow position: chrX:47481456-47481928 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 327
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 91, 58

Conread position: 572-1117
Cow position: chrX:31443163-31442610 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 58

Conread position: 573-1116
Cow position: chrX:40558018-40557430 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 198

Conread position: 574-711
Cow position: chrX:6487659-6487801 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 576-779
Cow position: chrX:33205333-33205117 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 576-1035
Cow position: chrX:43527163-43527652 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 347

Conread position: 576-1148
Cow position: chrX:15545558-15546140 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 272

Conread position: 577-687
Cow position: chrX:26754123-26754010 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 577-693
Cow position: chrX:2425460-2425341 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 577-1127
Cow position: chrX:34454336-34454898 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 44

Conread position: 578-766
Cow position: chrX:27419319-27419120 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 578-780
Cow position: chrX:36820569-36820354 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 578-782
Cow position: chrX:13196308-13196091 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 578-782
Cow position: chrX:30686933-30686713 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 579-1125
Cow position: chrX:43114836-43115386 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 162

Conread position: 580-777
Cow position: chrX:27458920-27459131 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 583-782
Cow position: chrX:23452930-23452718 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 583-793
Cow position: chrX:45421005-45420783 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 13

Conread position: 583-932
Cow position: chrX:6234766-6234410 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 32

Conread position: 583-1029
Cow position: chrX:7645926-7646394 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 239

Conread position: 584-1034
Cow position: chrX:36778074-36778541 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 308

Conread position: 585-761
Cow position: chrX:8103423-8103236 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 585-777
Cow position: chrX:30060861-30060656 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 585-782
Cow position: chrX:29083795-29084000 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 586-839
Cow position: chrX:42855082-42855359 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 588-787
Cow position: chrX:12850805-12851017 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 588-1060
Cow position: chrX:38007095-38006603 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 240

Conread position: 589-782
Cow position: chrX:15008758-15008552 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 589-782
Cow position: chrX:29356261-29356467 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 589-782
Cow position: chrX:29844802-29844596 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 589-1123
Cow position: chrX:26492676-26493243 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 327

Conread position: 590-782
Cow position: chrX:23215782-23215987 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 590-1008
Cow position: chrX:16783169-16783608 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 286
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 323

Conread position: 590-1116
Cow position: chrX:5638493-5637951 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 235

Conread position: 591-693
Cow position: chrX:10348158-10348053 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 593-1066
Cow position: chrX:36311277-36311745 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 164

Conread position: 595-897
Cow position: chrX:12826427-12826753 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 253

Conread position: 596-1138
Cow position: chrX:41238679-41238111 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 16

Conread position: 597-782
Cow position: chrX:3658372-3658174 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 597-782
Cow position: chrX:27469972-27469774 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 597-874
Cow position: chrX:9161270-9161569 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 597-923
Cow position: chrX:28157169-28157531 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 16

Conread position: 597-1051
Cow position: chrX:33639650-33640135 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 35

Conread position: 599-782
Cow position: chrX:14152531-14152335 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 600-763
Cow position: chrX:616718-616547 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 149
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 0

Conread position: 600-782
Cow position: chrX:42779441-42779246 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 600-787
Cow position: chrX:43101212-43101412 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 600-830
Cow position: chrX:39704390-39704633 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 67, 35

Conread position: 600-945
Cow position: chrX:28845529-28845887 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 161

Conread position: 601-686
Cow position: chrX:5899909-5899994 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 601-782
Cow position: chrX:42165761-42165955 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 601-881
Cow position: chrX:19188622-19188929 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 602-737
Cow position: chrX:37129010-37129152 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 602-782
Cow position: chrX:3895289-3895096 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 603-795
Cow position: chrX:26619673-26619473 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 12

Conread position: 603-819
Cow position: chrX:20376658-20376889 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 89, 0

Conread position: 603-1112
Cow position: chrX:7350990-7351525 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 132

Conread position: 606-779
Cow position: chrX:30021407-30021221 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 606-884
Cow position: chrX:23061145-23061428 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 158

Conread position: 606-933
Cow position: chrX:14924691-14925041 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 129

Conread position: 607-884
Cow position: chrX:20709767-20710067 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 87, 76

Conread position: 608-767
Cow position: chrX:45410350-45410179 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 609-874
Cow position: chrX:33466311-33466594 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 223

Conread position: 609-932
Cow position: chrX:11314084-11313740 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 246

Conread position: 610-761
Cow position: chrX:5919165-5919327 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 610-1048
Cow position: chrX:45414605-45414148 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 308
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 214

Conread position: 611-818
Cow position: chrX:5047201-5046981 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 131

Conread position: 615-873
Cow position: chrX:33020186-33020467 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 249

Conread position: 616-1015
Cow position: chrX:14221784-14222199 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 277
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 112

Conread position: 616-1141
Cow position: chrX:1176273-1175737 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 80

Conread position: 617-928
Cow position: chrX:19015144-19015473 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 203

Conread position: 619-1004
Cow position: chrX:754662-755077 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 279
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 313

Conread position: 621-830
Cow position: chrX:48536946-48536728 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 58

Conread position: 622-932
Cow position: chrX:25237885-25238219 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 247

Conread position: 622-1112
Cow position: chrX:22482982-22482465 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 350
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 45, 205

Conread position: 623-809
Cow position: chrX:37102333-37102141 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 624-907
Cow position: chrX:35041931-35042241 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 304

Conread position: 625-1014
Cow position: chrX:44835106-44834674 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 298
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 299

Conread position: 625-1137
Cow position: chrX:4269357-4268821 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 278

Conread position: 629-1014
Cow position: chrX:48195327-48194913 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 411

Conread position: 629-1068
Cow position: chrX:31294826-31294393 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 100

Conread position: 629-1120
Cow position: chrX:46033004-46032495 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 277

Conread position: 631-757
Cow position: chrX:42928066-42927933 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 632-1001
Cow position: chrX:2467597-2467994 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 48

Conread position: 633-1126
Cow position: chrX:16762490-16763007 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 133

Conread position: 634-931
Cow position: chrX:42874697-42875022 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 287

Conread position: 634-1080
Cow position: chrX:37836308-37836770 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 274

Conread position: 635-929
Cow position: chrX:9997611-9997297 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 31, 185

Conread position: 635-932
Cow position: chrX:40647698-40648026 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 30, 196

Conread position: 635-1104
Cow position: chrX:8730799-8731310 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 351

Conread position: 637-1014
Cow position: chrX:8925428-8925822 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 182

Conread position: 638-945
Cow position: chrX:12017998-12018346 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 279

Conread position: 638-1019
Cow position: chrX:35413353-35413739 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 153

Conread position: 640-884
Cow position: chrX:7496974-7497234 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 25

Conread position: 640-940
Cow position: chrX:34270141-34270449 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 69, 63

Conread position: 642-793
Cow position: chrX:5856596-5856437 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 642-1004
Cow position: chrX:37416348-37415963 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 255
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 261

Conread position: 642-1123
Cow position: chrX:40183623-40183119 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 339
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 249

Conread position: 643-1127
Cow position: chrX:32020391-32019894 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 19

Conread position: 644-1120
Cow position: chrX:27509292-27508792 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 202

Conread position: 645-1014
Cow position: chrX:45404104-45403703 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 24, 270

Conread position: 649-1053
Cow position: chrX:17725712-17726138 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 171

Conread position: 652-943
Cow position: chrX:41198852-41199158 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 24

Conread position: 655-888
Cow position: chrX:20752007-20752253 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 21

Conread position: 655-1112
Cow position: chrX:9635439-9634968 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 325
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 167

Conread position: 660-884
Cow position: chrX:1728670-1728434 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 159

Conread position: 660-1060
Cow position: chrX:17631055-17630632 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 283
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 160

Conread position: 660-1068
Cow position: chrX:34663090-34662670 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 661-1065
Cow position: chrX:28878413-28878001 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 112

Conread position: 661-1116
Cow position: chrX:24366080-24365594 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 57

Conread position: 661-1124
Cow position: chrX:25816147-25815664 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 186

Conread position: 662-915
Cow position: chrX:23497913-23497644 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 153

Conread position: 662-1039
Cow position: chrX:17541714-17542108 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 159

Conread position: 662-1112
Cow position: chrX:46073063-46072606 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 316
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 58, 17

Conread position: 663-885
Cow position: chrX:42282186-42282423 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 154

Conread position: 663-1112
Cow position: chrX:4768502-4768951 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 8

Conread position: 665-813
Cow position: chrX:45787407-45787569 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 665-1106
Cow position: chrX:20151603-20152066 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 321
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 300

Conread position: 665-1125
Cow position: chrX:27432166-27431687 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 160

Conread position: 666-1051
Cow position: chrX:9416938-9416524 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 5

Conread position: 668-888
Cow position: chrX:39938761-39938525 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 202

Conread position: 670-1039
Cow position: chrX:678810-678427 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 144

Conread position: 670-1112
Cow position: chrX:34313797-34314245 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 302
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 99

Conread position: 671-844
Cow position: chrX:19930416-19930606 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 9

Conread position: 671-884
Cow position: chrX:30833079-30832855 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 35

Conread position: 672-923
Cow position: chrX:44053018-44053291 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 149

Conread position: 672-1012
Cow position: chrX:21004444-21004804 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 23, 156

Conread position: 672-1088
Cow position: chrX:21672311-21672762 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 238

Conread position: 673-1113
Cow position: chrX:11939163-11938728 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 311
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 154

Conread position: 674-945
Cow position: chrX:41167202-41166908 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 241

Conread position: 674-1000
Cow position: chrX:27680165-27680507 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 23, 142

Conread position: 674-1142
Cow position: chrX:42492748-42492268 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 171

Conread position: 675-918
Cow position: chrX:40116188-40116443 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 142

Conread position: 675-1051
Cow position: chrX:27772193-27771808 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 61

Conread position: 675-1143
Cow position: chrX:16541910-16541401 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 337
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 676-888
Cow position: chrX:46315611-46315379 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 142

Conread position: 678-879
Cow position: chrX:877257-877044 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 189

Conread position: 680-1047
Cow position: chrX:40809458-40809849 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 233

Conread position: 687-839
Cow position: chrX:18195724-18195879 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 687-1123
Cow position: chrX:32329943-32330406 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 693-1148
Cow position: chrX:3579732-3580205 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 198

Conread position: 696-830
Cow position: chrX:16324173-16324030 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 696-835
Cow position: chrX:6639916-6640069 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 696-873
Cow position: chrX:44063926-44063737 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 141

Conread position: 696-874
Cow position: chrX:45015377-45015563 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 696-875
Cow position: chrX:48684432-48684239 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 696-881
Cow position: chrX:42339145-42338955 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 112

Conread position: 696-885
Cow position: chrX:13265829-13265630 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 114

Conread position: 696-887
Cow position: chrX:2206753-2206558 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 91

Conread position: 696-887
Cow position: chrX:4750507-4750309 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 16

Conread position: 696-889
Cow position: chrX:35284414-35284619 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 696-895
Cow position: chrX:47757138-47756923 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 696-912
Cow position: chrX:7513307-7513530 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 15

Conread position: 696-918
Cow position: chrX:28836110-28835876 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 112

Conread position: 696-928
Cow position: chrX:10123554-10123317 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 169

Conread position: 696-931
Cow position: chrX:42499238-42499008 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 86

Conread position: 696-937
Cow position: chrX:40567390-40567643 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 163

Conread position: 696-944
Cow position: chrX:36961428-36961692 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 15

Conread position: 696-999
Cow position: chrX:40692947-40692643 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 205
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 46

Conread position: 696-1012
Cow position: chrX:11856220-11856551 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 72, 163

Conread position: 696-1022
Cow position: chrX:1514610-1514288 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 18, 142

Conread position: 696-1022
Cow position: chrX:37574647-37574971 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 18, 113

Conread position: 696-1023
Cow position: chrX:39558556-39558217 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 124

Conread position: 696-1029
Cow position: chrX:17662806-17662460 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 122

Conread position: 696-1031
Cow position: chrX:37910243-37910583 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 112

Conread position: 696-1034
Cow position: chrX:11073398-11073049 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 347

Conread position: 696-1041
Cow position: chrX:23091672-23092023 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 118

Conread position: 696-1048
Cow position: chrX:6265795-6265442 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 66

Conread position: 696-1049
Cow position: chrX:6690457-6690102 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 79

Conread position: 696-1051
Cow position: chrX:32623373-32623730 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 89

Conread position: 696-1051
Cow position: chrX:41884627-41884252 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 122

Conread position: 696-1054
Cow position: chrX:13382116-13382488 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 18, 210

Conread position: 696-1054
Cow position: chrX:27394223-27393863 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 114

Conread position: 696-1071
Cow position: chrX:47046729-47046334 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 18, 208

Conread position: 696-1097
Cow position: chrX:22821838-22822264 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 129

Conread position: 696-1105
Cow position: chrX:6488378-6488782 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 288
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 10

Conread position: 696-1111
Cow position: chrX:29602040-29601606 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 15

Conread position: 696-1112
Cow position: chrX:22074591-22075019 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 118

Conread position: 696-1112
Cow position: chrX:29542428-29542004 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 299
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 18, 118

Conread position: 696-1116
Cow position: chrX:40035655-40035214 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 133

Conread position: 696-1119
Cow position: chrX:9425951-9425531 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 696-1119
Cow position: chrX:38549239-38549678 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 130

Conread position: 696-1124
Cow position: chrX:42381309-42380875 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 214

Conread position: 696-1131
Cow position: chrX:23514227-23513761 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 335
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 18, 26

Conread position: 696-1135
Cow position: chrX:12980040-12979589 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 696-1135
Cow position: chrX:28013649-28013192 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 309
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 15, 197

Conread position: 697-810
Cow position: chrX:18812049-18812169 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 15

Conread position: 697-831
Cow position: chrX:4942958-4942819 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 113

Conread position: 697-884
Cow position: chrX:14900930-14900735 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 117

Conread position: 697-931
Cow position: chrX:23970180-23970418 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 113

Conread position: 697-932
Cow position: chrX:9953933-9954179 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 173

Conread position: 697-933
Cow position: chrX:29509652-29509397 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 212

Conread position: 697-970
Cow position: chrX:11589801-11589509 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 214

Conread position: 697-1000
Cow position: chrX:15814889-15815192 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 17, 60

Conread position: 697-1014
Cow position: chrX:48652936-48652599 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 202

Conread position: 697-1029
Cow position: chrX:1503130-1503465 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 118

Conread position: 697-1054
Cow position: chrX:33493566-33493940 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 121

Conread position: 697-1068
Cow position: chrX:16416300-16416679 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 267
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 16

Conread position: 697-1098
Cow position: chrX:35542683-35543094 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 295
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 17, 120

Conread position: 697-1105
Cow position: chrX:34543579-34544003 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 697-1112
Cow position: chrX:38852988-38853435 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 17, 118

Conread position: 697-1112
Cow position: chrX:45598812-45598384 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 17, 118

Conread position: 697-1116
Cow position: chrX:11633470-11633910 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 206

Conread position: 697-1116
Cow position: chrX:21663101-21663523 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 68, 146

Conread position: 697-1116
Cow position: chrX:44961539-44961983 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 298
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 17, 229

Conread position: 697-1123
Cow position: chrX:30963080-30962640 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 199

Conread position: 697-1124
Cow position: chrX:17231526-17231973 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 200

Conread position: 697-1124
Cow position: chrX:21642687-21642245 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 302
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 32

Conread position: 697-1127
Cow position: chrX:1465979-1466403 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 289
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 72

Conread position: 697-1127
Cow position: chrX:27174786-27175239 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 261

Conread position: 697-1127
Cow position: chrX:45110447-45110889 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 297
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 119

Conread position: 697-1128
Cow position: chrX:6278714-6278257 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 400

Conread position: 697-1137
Cow position: chrX:48236603-48237065 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 309
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 209

Conread position: 697-1159
Cow position: chrX:34411631-34412122 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 698-884
Cow position: chrX:43049137-43049343 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 698-941
Cow position: chrX:26285772-26286030 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 698-946
Cow position: chrX:26876089-26875826 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 115

Conread position: 698-1104
Cow position: chrX:10831704-10831265 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 122

Conread position: 698-1116
Cow position: chrX:38935074-38935507 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 144

Conread position: 698-1116
Cow position: chrX:48010387-48010833 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 297
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 698-1136
Cow position: chrX:32420011-32420458 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 193

Conread position: 698-1154
Cow position: chrX:33000697-33001161 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 115

Conread position: 699-1067
Cow position: chrX:841952-842334 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 15, 193

Conread position: 699-1123
Cow position: chrX:9201340-9201778 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 119

Conread position: 699-1124
Cow position: chrX:16996300-16996730 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 292
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 15, 142

Conread position: 699-1124
Cow position: chrX:46587611-46588056 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 360

Conread position: 700-1029
Cow position: chrX:29120851-29121185 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 76

Conread position: 700-1099
Cow position: chrX:36975744-36976163 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 239

Conread position: 702-925
Cow position: chrX:17908487-17908255 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 110

Conread position: 702-1113
Cow position: chrX:29545083-29544662 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 193

Conread position: 703-1126
Cow position: chrX:36355921-36356343 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 294
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 41

Conread position: 704-1112
Cow position: chrX:1499468-1499878 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 297
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 190

Conread position: 704-1119
Cow position: chrX:36283144-36283571 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 310
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 200

Conread position: 706-1014
Cow position: chrX:47303079-47302755 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 138

Conread position: 714-1035
Cow position: chrX:31311835-31312173 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 103

Conread position: 714-1063
Cow position: chrX:3489075-3488719 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 63, 69

Conread position: 714-1068
Cow position: chrX:44657155-44656786 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 221

Conread position: 716-1023
Cow position: chrX:7161883-7162188 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 112, 12

Conread position: 716-1053
Cow position: chrX:42235722-42235361 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 113

Conread position: 718-860
Cow position: chrX:31256681-31256833 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 94

Conread position: 720-1054
Cow position: chrX:36067835-36068182 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 99

Conread position: 722-1128
Cow position: chrX:32820847-32821280 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 305
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 11

Conread position: 723-1067
Cow position: chrX:7336645-7337018 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 161

Conread position: 725-946
Cow position: chrX:13785537-13785305 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 35

Conread position: 726-1124
Cow position: chrX:36060973-36061395 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 273
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 291

Conread position: 727-1071
Cow position: chrX:47186498-47186147 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 168

Conread position: 729-1068
Cow position: chrX:169701-169365 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 108, 39

Conread position: 729-1112
Cow position: chrX:27145447-27145823 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 5, 96

Conread position: 731-1127
Cow position: chrX:22387421-22387004 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 288
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 179

Conread position: 731-1148
Cow position: chrX:35885903-35885472 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 325

Conread position: 732-1127
Cow position: chrX:6407376-6407780 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 92

Conread position: 733-1116
Cow position: chrX:34792482-34792095 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 83

Conread position: 733-1119
Cow position: chrX:37955666-37956076 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 285
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 56, 86

Conread position: 733-1127
Cow position: chrX:4398954-4399357 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 289
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 94

Conread position: 734-1148
Cow position: chrX:14955938-14955509 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 281
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 18

Conread position: 742-1048
Cow position: chrX:22454252-22453942 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 128

Conread position: 742-1106
Cow position: chrX:45875239-45875608 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 47

Conread position: 744-1068
Cow position: chrX:5680085-5679754 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 215
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 94, 11

Conread position: 747-1104
Cow position: chrX:27227966-27228345 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 158

Conread position: 750-1126
Cow position: chrX:9651165-9650794 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 86, 29

Conread position: 754-1142
Cow position: chrX:8917251-8917653 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 260
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 8

Conread position: 755-1054
Cow position: chrX:29680404-29680099 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 5

Conread position: 755-1137
Cow position: chrX:870310-869933 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 23, 5

Conread position: 765-1068
Cow position: chrX:31252289-31252584 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 72, 14

Conread position: 765-1133
Cow position: chrX:18204598-18204220 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 266
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 123

Conread position: 765-1134
Cow position: chrX:29723606-29723998 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 118

Conread position: 765-1134
Cow position: chrX:41027022-41027408 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 14, 51

Conread position: 768-1125
Cow position: chrX:34315398-34315764 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 37

Conread position: 773-1127
Cow position: chrX:24331655-24332016 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 6, 117

Conread position: 774-1127
Cow position: chrX:43049940-43050309 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 228

Conread position: 779-995
Cow position: chrX:27685131-27685353 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 135

Conread position: 779-1035
Cow position: chrX:5679682-5679428 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 117

Conread position: 779-1047
Cow position: chrX:38728621-38728890 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 116

Conread position: 779-1053
Cow position: chrX:46433370-46433652 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 27, 117

Conread position: 779-1054
Cow position: chrX:616378-616095 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 36

Conread position: 779-1054
Cow position: chrX:9365791-9365513 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 35

Conread position: 779-1106
Cow position: chrX:40685447-40685111 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 58, 26

Conread position: 779-1112
Cow position: chrX:21986408-21986077 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 36

Conread position: 779-1112
Cow position: chrX:26881684-26881338 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 59, 36

Conread position: 779-1113
Cow position: chrX:36393463-36393116 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 151

Conread position: 779-1126
Cow position: chrX:4403198-4403557 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 58, 115

Conread position: 779-1127
Cow position: chrX:25207959-25207622 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 36, 56

Conread position: 779-1137
Cow position: chrX:18111274-18111627 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 62

Conread position: 779-1137
Cow position: chrX:40320289-40320654 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 35, 103

Conread position: 782-1049
Cow position: chrX:7710656-7710380 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 114

Conread position: 782-1112
Cow position: chrX:42927932-42927606 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 34

Conread position: 783-1065
Cow position: chrX:27119587-27119862 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 53, 103

Conread position: 783-1127
Cow position: chrX:5919384-5919729 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 76, 32

Conread position: 784-1113
Cow position: chrX:46022677-46023000 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 55

Conread position: 784-1116
Cow position: chrX:33654958-33654615 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 22, 58

Conread position: 784-1138
Cow position: chrX:17949601-17949244 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 101

Conread position: 785-1136
Cow position: chrX:46546987-46546626 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 55

Conread position: 785-1157
Cow position: chrX:34505157-34504783 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 30

Conread position: 791-1057
Cow position: chrX:29937983-29938257 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 793-1125
Cow position: chrX:21327801-21328151 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 796-1113
Cow position: chrX:10516157-10516479 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 19

Conread position: 799-1054
Cow position: chrX:37129172-37129432 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 799-1054
Cow position: chrX:45884071-45883808 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 15

Conread position: 799-1148
Cow position: chrX:12095870-12095507 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 81

Conread position: 801-1120
Cow position: chrX:27261093-27261422 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 248

Conread position: 805-1125
Cow position: chrX:20168467-20168792 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 32, 94

Conread position: 805-1128
Cow position: chrX:29050156-29050479 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 32, 127

Conread position: 806-1127
Cow position: chrX:42855365-42855702 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 807-1064
Cow position: chrX:33205053-33204796 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 88

Conread position: 807-1124
Cow position: chrX:48071072-48071398 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 210
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 76

Conread position: 808-1126
Cow position: chrX:40680523-40680853 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 29, 0

Conread position: 808-1143
Cow position: chrX:22283744-22284092 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 172

Conread position: 812-1112
Cow position: chrX:27075127-27074827 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 31

Conread position: 813-1128
Cow position: chrX:16575040-16575347 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 85

Conread position: 814-1129
Cow position: chrX:6559527-6559213 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 69

Conread position: 816-1112
Cow position: chrX:39220000-39220312 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 36

Conread position: 818-1068
Cow position: chrX:4515606-4515864 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 74

Conread position: 827-1116
Cow position: chrX:4109124-4109413 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 35, 66

Conread position: 834-1125
Cow position: chrX:13146922-13147221 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 45

Conread position: 834-1164
Cow position: chrX:2675018-2674678 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 43

Conread position: 839-1123
Cow position: chrX:44339378-44339086 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 23, 101

Conread position: 840-1124
Cow position: chrX:44090872-44091159 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 184
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 37

Conread position: 844-1123
Cow position: chrX:43152203-43151916 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 5

Conread position: 844-1124
Cow position: chrX:44660635-44660353 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 5

Conread position: 844-1136
Cow position: chrX:47013450-47013153 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 5

Conread position: 847-1116
Cow position: chrX:44202090-44201817 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 60

Conread position: 847-1116
Cow position: chrX:48532271-48532542 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 30

Conread position: 847-1124
Cow position: chrX:44859906-44859626 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 30

Conread position: 847-1124
Cow position: chrX:48198690-48198412 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 30

Conread position: 847-1124
Cow position: chrX:48570887-48570607 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 30

Conread position: 847-1137
Cow position: chrX:46793789-46793500 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 30

Conread position: 847-1148
Cow position: chrX:26205496-26205197 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 39

Conread position: 847-1158
Cow position: chrX:48473864-48474179 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 207
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 30

Conread position: 852-1124
Cow position: chrX:45254621-45254346 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 25

Conread position: 852-1124
Cow position: chrX:48397866-48397590 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 25

Conread position: 852-1126
Cow position: chrX:48574608-48574885 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 25

Conread position: 852-1137
Cow position: chrX:44736894-44736600 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 25

Conread position: 852-1159
Cow position: chrX:44591100-44590793 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 83, 25

Conread position: 859-1104
Cow position: chrX:4645943-4645698 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 76, 32

Conread position: 859-1106
Cow position: chrX:36866140-36866391 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 18

Conread position: 859-1112
Cow position: chrX:17956664-17956913 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 211, 31

Conread position: 859-1127
Cow position: chrX:24457584-24457308 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 18

Conread position: 859-1127
Cow position: chrX:41941595-41941863 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 76, 26

Conread position: 859-1135
Cow position: chrX:42893886-42894172 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 210

Conread position: 860-1116
Cow position: chrX:48003817-48004074 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 75, 17

Conread position: 861-1127
Cow position: chrX:19394523-19394795 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 16

Conread position: 862-1127
Cow position: chrX:38321415-38321143 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 169

Conread position: 863-1054
Cow position: chrX:20743575-20743768 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 30

Conread position: 863-1144
Cow position: chrX:6599811-6599517 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 21

Conread position: 866-1117
Cow position: chrX:28940221-28940473 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 26

Conread position: 866-1138
Cow position: chrX:1088167-1087899 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 72

Conread position: 870-1156
Cow position: chrX:24336098-24335810 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 15

Conread position: 871-1157
Cow position: chrX:32574293-32574585 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 191

Conread position: 873-1148
Cow position: chrX:42450033-42449749 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 20

Conread position: 881-1116
Cow position: chrX:40574953-40574715 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 55

Conread position: 882-1116
Cow position: chrX:38587854-38587617 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 5

Conread position: 886-1141
Cow position: chrX:35658793-35659048 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 72

Conread position: 887-1127
Cow position: chrX:7648416-7648174 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 120

Conread position: 888-1135
Cow position: chrX:42479828-42480075 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 145

Conread position: 888-1158
Cow position: chrX:27668963-27668691 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 149

Conread position: 891-1105
Cow position: chrX:42836179-42836398 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 142

Conread position: 891-1113
Cow position: chrX:2935955-2936178 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 144

Conread position: 891-1145
Cow position: chrX:20957240-20957498 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 10

Conread position: 891-1145
Cow position: chrX:25049283-25049025 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 174

Conread position: 893-1113
Cow position: chrX:29478724-29478947 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 75

Conread position: 893-1125
Cow position: chrX:5063251-5063473 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 40

Conread position: 893-1129
Cow position: chrX:13121940-13122186 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 14

Conread position: 896-1116
Cow position: chrX:35392289-35392077 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 39, 11

Conread position: 896-1124
Cow position: chrX:29451544-29451309 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 7

Conread position: 899-1114
Cow position: chrX:3494816-3494595 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 900-1127
Cow position: chrX:17292963-17293195 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 901-1128
Cow position: chrX:32877366-32877139 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 131

Conread position: 901-1141
Cow position: chrX:26843260-26843013 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 161
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 905-1126
Cow position: chrX:8493079-8493306 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 30, 195

Conread position: 909-1067
Cow position: chrX:39180216-39180058 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 86

Conread position: 909-1112
Cow position: chrX:1122526-1122323 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 49

Conread position: 909-1113
Cow position: chrX:19761771-19761974 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 132

Conread position: 909-1124
Cow position: chrX:43008626-43008846 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 909-1128
Cow position: chrX:20583683-20583900 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 127

Conread position: 909-1136
Cow position: chrX:26979772-26979543 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 68

Conread position: 909-1137
Cow position: chrX:36313989-36313761 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 145

Conread position: 909-1141
Cow position: chrX:20345470-20345701 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 161, 33

Conread position: 911-1127
Cow position: chrX:19018812-19018589 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 911-1137
Cow position: chrX:4328164-4327932 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 69

Conread position: 912-1116
Cow position: chrX:40336931-40337139 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 45

Conread position: 912-1124
Cow position: chrX:24170709-24170489 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 76

Conread position: 912-1127
Cow position: chrX:34420754-34420974 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 203

Conread position: 912-1128
Cow position: chrX:35285193-35285414 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 67

Conread position: 912-1153
Cow position: chrX:28067870-28068112 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 214

Conread position: 915-1132
Cow position: chrX:36260706-36260928 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 115, 31

Conread position: 917-1128
Cow position: chrX:16763902-16763690 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 126

Conread position: 917-1141
Cow position: chrX:19717546-19717761 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 34

Conread position: 918-1119
Cow position: chrX:44040207-44040408 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 152, 18

Conread position: 921-1124
Cow position: chrX:46909844-46910044 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 37

Conread position: 921-1126
Cow position: chrX:17524355-17524146 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 43

Conread position: 921-1129
Cow position: chrX:2314590-2314376 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 921-1134
Cow position: chrX:34398755-34398537 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 922-1130
Cow position: chrX:37749953-37749749 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 40

Conread position: 922-1138
Cow position: chrX:4091954-4092171 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 13, 149

Conread position: 927-1143
Cow position: chrX:35681603-35681823 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 143, 104

Conread position: 928-1127
Cow position: chrX:10415215-10415013 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 7

Conread position: 929-1163
Cow position: chrX:30958766-30959006 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 17

Conread position: 930-1116
Cow position: chrX:44870392-44870208 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 150, 20

Conread position: 936-1127
Cow position: chrX:8642091-8642284 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 134, 40

Conread position: 936-1127
Cow position: chrX:35409797-35409991 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 134, 57

Conread position: 943-1124
Cow position: chrX:1121315-1121130 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 949-1112
Cow position: chrX:6480538-6480371 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 953-1119
Cow position: chrX:30789469-30789298 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 954-1113
Cow position: chrX:48574294-48574129 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 954-1126
Cow position: chrX:41435486-41435305 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 171

Conread position: 956-1104
Cow position: chrX:11813138-11813290 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 956-1116
Cow position: chrX:296456-296620 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 956-1116
Cow position: chrX:4602873-4602710 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 114, 15

Conread position: 956-1116
Cow position: chrX:41215387-41215551 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 956-1127
Cow position: chrX:16770129-16770304 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 956-1128
Cow position: chrX:27459930-27460107 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 168

Conread position: 958-1127
Cow position: chrX:11589300-11589128 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 99

Conread position: 959-1104
Cow position: chrX:10237845-10237697 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 108, 66

Conread position: 959-1104
Cow position: chrX:31986506-31986356 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 70

Conread position: 959-1106
Cow position: chrX:46533237-46533086 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 959-1111
Cow position: chrX:40556391-40556240 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 79

Conread position: 959-1111
Cow position: chrX:45759739-45759892 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 81

Conread position: 959-1112
Cow position: chrX:11653838-11653991 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 959-1112
Cow position: chrX:42760320-42760477 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 959-1113
Cow position: chrX:22552911-22552754 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 111, 131

Conread position: 959-1116
Cow position: chrX:1960357-1960197 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 111, 92

Conread position: 959-1116
Cow position: chrX:31983517-31983350 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 959-1122
Cow position: chrX:4559801-4559968 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 959-1124
Cow position: chrX:26882012-26881844 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 161

Conread position: 959-1125
Cow position: chrX:8759694-8759860 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 17

Conread position: 959-1125
Cow position: chrX:23335908-23335738 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 959-1125
Cow position: chrX:37752038-37751874 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 109, 72

Conread position: 959-1127
Cow position: chrX:45044520-45044693 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 959-1128
Cow position: chrX:9451413-9451581 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 47

Conread position: 959-1128
Cow position: chrX:14925340-14925515 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 959-1130
Cow position: chrX:48558814-48558989 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 959-1136
Cow position: chrX:41010966-41011138 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 66

Conread position: 959-1137
Cow position: chrX:14135746-14135926 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 76

Conread position: 959-1141
Cow position: chrX:17498390-17498578 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 959-1146
Cow position: chrX:27270443-27270627 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 82

Conread position: 959-1148
Cow position: chrX:1938082-1938272 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 75

Conread position: 959-1149
Cow position: chrX:33466692-33466884 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 68

Conread position: 959-1152
Cow position: chrX:44995566-44995763 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 166

Conread position: 960-1113
Cow position: chrX:28106916-28107071 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 110, 86

Conread position: 960-1123
Cow position: chrX:37867322-37867489 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 960-1142
Cow position: chrX:37867501-37867687 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 961-1119
Cow position: chrX:16801193-16801036 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 18

Conread position: 961-1120
Cow position: chrX:33678403-33678239 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 160

Conread position: 961-1127
Cow position: chrX:32215298-32215468 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 961-1128
Cow position: chrX:51831-51664 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 109, 73

Conread position: 961-1158
Cow position: chrX:47100527-47100319 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 962-1112
Cow position: chrX:8326975-8327129 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 963-1126
Cow position: chrX:34194009-34193842 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 966-1135
Cow position: chrX:42506874-42506699 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 966-1157
Cow position: chrX:13923939-13924132 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 104, 74

Conread position: 967-1124
Cow position: chrX:11670762-11670923 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 969-1129
Cow position: chrX:37717800-37717966 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 101, 10

Conread position: 971-1149
Cow position: chrX:35509599-35509419 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 70

Conread position: 974-1127
Cow position: chrX:19356546-19356703 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 977-1120
Cow position: chrX:876761-876616 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 141

Conread position: 979-1135
Cow position: chrX:1996364-1996204 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 984-1112
Cow position: chrX:10479842-10479974 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 987-1124
Cow position: chrX:597383-597242 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 987-1128
Cow position: chrX:42159037-42159183 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 990-1113
Cow position: chrX:13347367-13347494 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 993-1143
Cow position: chrX:41194007-41194159 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 16

Conread position: 1006-1136
Cow position: chrX:23185223-23185089 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 1007-1133
Cow position: chrX:19162015-19161885 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.