Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050B04.5 |
| Conread position: | 638-945 |
| Cow position: | chr14:25783982-25784289 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 258, 254 |
| Conread position: | 646-946 |
| Cow position: | chr14:25783402-25783702 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 237, 250 |
| Conread position: | 647-945 |
| Cow position: | chr14:25784327-25784625 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 249, 245 |
| Conread position: | 656-879 |
| Cow position: | chr14:25784504-25784727 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 656-940 |
| Cow position: | chr14:25794526-25794241 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 656-945 |
| Cow position: | chr14:25784168-25784457 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 227, 240 |
| Conread position: | 656-946 |
| Cow position: | chr14:25783748-25784038 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 656-947 |
| Cow position: | chr14:25783580-25783871 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 227, 240 |
| Conread position: | 657-879 |
| Cow position: | chr14:25794693-25794471 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 657-881 |
| Cow position: | chr14:3156051-3156275 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-935 |
| Cow position: | chr14:25910984-25911262 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 657-936 |
| Cow position: | chr14:3100934-3100657 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 657-936 |
| Cow position: | chr14:3101434-3101156 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 143, 110 |
| Conread position: | 657-936 |
| Cow position: | chr14:25836368-25836647 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-936 |
| Cow position: | chr14:25836620-25836899 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 143, 150 |
| Conread position: | 657-936 |
| Cow position: | chr14:25876724-25877003 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 81, 74 |
| Conread position: | 657-936 |
| Cow position: | chr14:25876892-25877171 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 24 |
| Conread position: | 657-938 |
| Cow position: | chr14:3156135-3156416 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-940 |
| Cow position: | chr14:25784253-25784536 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-945 |
| Cow position: | chr14:25783665-25783953 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 236, 213 |
| Conread position: | 657-946 |
| Cow position: | chr14:25783329-25783618 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 657-946 |
| Cow position: | chr14:25783497-25783786 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-946 |
| Cow position: | chr14:25783917-25784206 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-946 |
| Cow position: | chr14:25784085-25784374 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-946 |
| Cow position: | chr14:25784421-25784710 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-946 |
| Cow position: | chr14:25794861-25794572 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 657-946 |
| Cow position: | chr14:25794945-25794656 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 657-946 |
| Cow position: | chr14:25795449-25795160 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 657-946 |
| Cow position: | chr14:25859589-25859878 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 659-936 |
| Cow position: | chr14:3127615-3127338 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 659-937 |
| Cow position: | chr14:3127699-3127421 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 659-945 |
| Cow position: | chr14:25794775-25794489 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 140, 148 |
| Conread position: | 661-937 |
| Cow position: | chr14:25795277-25795001 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 232, 215 |
| Conread position: | 665-933 |
| Cow position: | chr14:25860185-25860453 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 135, 142 |
| Conread position: | 665-935 |
| Cow position: | chr14:25794433-25794162 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 104, 227 |
| Conread position: | 667-938 |
| Cow position: | chr14:3155404-3155675 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 670-939 |
| Cow position: | chr14:3155980-3156249 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 670-945 |
| Cow position: | chr14:25795352-25795077 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 671-881 |
| Cow position: | chr14:25836970-25837180 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 671-936 |
| Cow position: | chr14:3080175-3079910 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 214, 241 |
| Conread position: | 671-936 |
| Cow position: | chr14:3127771-3127506 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 671-937 |
| Cow position: | chr14:3080091-3079825 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 671-937 |
| Cow position: | chr14:25836550-25836816 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 671-945 |
| Cow position: | chr14:25876654-25876928 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 672-935 |
| Cow position: | chr14:447925-448188 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 675-945 |
| Cow position: | chr14:25794591-25794320 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 689-939 |
| Cow position: | chr14:3101151-3100904 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 728-945 |
| Cow position: | chr14:25783904-25784121 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 155, 168 |
| Conread position: | 735-940 |
| Cow position: | chr14:447568-447773 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 152, 176 |
| Conread position: | 749-939 |
| Cow position: | chr14:3127777-3127587 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.