Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8050B04.5
        

               Conread position:
               343-468
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               343-471
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               343-480
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 85
               

               Conread position:
               633-936
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               167, 171
               

               Conread position:
               649-940
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 70
               

               Conread position:
               656-843
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-933
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               227, 233
               

               Conread position:
               656-939
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               231, 239
               

               Conread position:
               656-940
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               72, 61
               

               Conread position:
               656-945
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               86, 61
               

               Conread position:
               656-946
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               60, 71
               

               Conread position:
               656-946
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               657-878
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               143, 147
               

               Conread position:
               657-881
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-935
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               657-935
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-935
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 58
               

               Conread position:
               657-936
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               91, 60
               

               Conread position:
               657-936
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 60
               

               Conread position:
               657-937
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               155, 148
               

               Conread position:
               657-938
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               236, 249
               

               Conread position:
               657-939
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               657-939
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               657-939
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-939
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               157, 148
               

               Conread position:
               657-939
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 90
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               67, 52
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               143, 151
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 58
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               135, 151
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               657-945
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               47, 58
               

               Conread position:
               657-945
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               657-945
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               163, 155
               

               Conread position:
               657-946
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 68
               

               Conread position:
               657-948
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               143, 147
               

               Conread position:
               657-948
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               658-931
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               58, 70
               

               Conread position:
               658-937
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               658-937
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               55, 65
               

               Conread position:
               658-938
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 70
               

               Conread position:
               658-945
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               80, 65
               

               Conread position:
               658-946
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 74
               

               Conread position:
               659-936
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               659-936
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               659-937
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-938
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               141, 149
               

               Conread position:
               659-940
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 67
               

               Conread position:
               659-945
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-945
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-946
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               660-936
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               158, 144
               

               Conread position:
               661-933
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               6, 55
               

               Conread position:
               664-945
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               220, 242
               

               Conread position:
               665-940
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               149, 136
               

               Conread position:
               670-937
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 47
               

               Conread position:
               670-937
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               670-938
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               670-940
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               670-940
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               145, 131
               

               Conread position:
               670-940
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               670-945
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 62
               

               Conread position:
               670-945
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               670-945
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               127, 132
               

               Conread position:
               670-945
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               671-882
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               130, 145
               

               Conread position:
               671-882
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               130, 145
               

               Conread position:
               671-928
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 44
               

               Conread position:
               671-936
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-945
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-945
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               129, 134
               

               Conread position:
               671-945
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               129, 133
               

               Conread position:
               671-945
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               129, 133
               

               Conread position:
               676-945
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               208, 230
               

               Conread position:
               677-939
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               678-945
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               685-933
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               685-945
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               115, 128
               

               Conread position:
               687-940
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               689-946
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               111, 115
               

               Conread position:
               689-948
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               705-945
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               710-931
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               728-945
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               729-945
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               734-939
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               737-939
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               743-945
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               71, 59
               

               Conread position:
               746-940
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               138, 148
               

               Conread position:
               760-939
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.