Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B04.5

Conread position: 343-468
Cow position: chr22:14465229-14465354 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 343-471
Cow position: chr22:14439803-14439931 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 343-480
Cow position: chr22:14426731-14426867 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 85

Conread position: 633-936
Cow position: chr22:12399464-12399161 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 167, 171

Conread position: 649-940
Cow position: chr22:46654493-46654784 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 70

Conread position: 656-843
Cow position: chr22:12385095-12384908 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 656-933
Cow position: chr22:46654164-46654441 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 227, 233

Conread position: 656-939
Cow position: chr22:11666598-11666881 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 231, 239

Conread position: 656-940
Cow position: chr22:12475734-12475450 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 72, 61

Conread position: 656-945
Cow position: chr22:12458625-12458336 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 86, 61

Conread position: 656-946
Cow position: chr22:12499525-12499815 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 71

Conread position: 656-946
Cow position: chr22:14430217-14430507 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 62

Conread position: 657-878
Cow position: chr22:12458036-12457815 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 143, 147

Conread position: 657-881
Cow position: chr22:12431672-12431448 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 657-935
Cow position: chr22:11640674-11640952 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 11

Conread position: 657-935
Cow position: chr22:12475565-12475287 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 657-935
Cow position: chr22:12499694-12499972 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 58

Conread position: 657-936
Cow position: chr22:12476069-12475790 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 60

Conread position: 657-936
Cow position: chr22:12499190-12499469 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 60

Conread position: 657-937
Cow position: chr22:12458120-12457840 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 155, 148

Conread position: 657-938
Cow position: chr22:12498938-12499219 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 236, 249

Conread position: 657-939
Cow position: chr22:12385262-12384980 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 143, 150

Conread position: 657-939
Cow position: chr22:12399104-12398822 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 67, 60

Conread position: 657-939
Cow position: chr22:12418791-12418509 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 657-939
Cow position: chr22:12476153-12475871 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 179
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 157, 148

Conread position: 657-939
Cow position: chr22:12499106-12499388 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 657-940
Cow position: chr22:12385600-12385315 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 90

Conread position: 657-940
Cow position: chr22:12399188-12398905 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 72

Conread position: 657-940
Cow position: chr22:12399272-12398989 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 67, 52

Conread position: 657-940
Cow position: chr22:12399356-12399073 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 60

Conread position: 657-940
Cow position: chr22:12399692-12399409 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 143, 151

Conread position: 657-940
Cow position: chr22:12431252-12430969 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 657-940
Cow position: chr22:12431756-12431473 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 58

Conread position: 657-940
Cow position: chr22:12432260-12431977 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 151

Conread position: 657-940
Cow position: chr22:12458372-12458089 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 657-940
Cow position: chr22:12475649-12475366 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 657-940
Cow position: chr22:12475901-12475618 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 60

Conread position: 657-940
Cow position: chr22:12476321-12476038 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 657-940
Cow position: chr22:12499610-12499893 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 657-940
Cow position: chr22:46654081-46654364 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 25

Conread position: 657-945
Cow position: chr22:12399524-12399236 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 58

Conread position: 657-945
Cow position: chr22:12399608-12399320 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 59, 67

Conread position: 657-945
Cow position: chr22:14467959-14468247 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 155

Conread position: 657-946
Cow position: chr22:11641094-11641383 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 68

Conread position: 657-948
Cow position: chr22:12419312-12419021 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 147

Conread position: 657-948
Cow position: chr22:12431084-12430793 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 60, 69

Conread position: 658-931
Cow position: chr22:12399019-12398746 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 58, 70

Conread position: 658-937
Cow position: chr22:12385431-12385150 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 61

Conread position: 658-937
Cow position: chr22:14429715-14429994 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 65

Conread position: 658-938
Cow position: chr22:14468044-14468324 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 70

Conread position: 658-945
Cow position: chr22:14430555-14430842 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 80, 65

Conread position: 658-946
Cow position: chr22:14429883-14430171 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 74

Conread position: 659-936
Cow position: chr22:12476235-12475958 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 64

Conread position: 659-936
Cow position: chr22:12499024-12499301 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 64

Conread position: 659-937
Cow position: chr22:12399774-12399496 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 659-938
Cow position: chr22:12430998-12430719 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 141, 149

Conread position: 659-940
Cow position: chr22:12430914-12430633 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 67

Conread position: 659-945
Cow position: chr22:12458286-12458000 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 659-945
Cow position: chr22:14429800-14430086 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 659-946
Cow position: chr22:12432174-12431887 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 181
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 56

Conread position: 660-936
Cow position: chr22:14430473-14430749 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 173
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 158, 144

Conread position: 661-933
Cow position: chr22:46654588-46654863 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 178
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 55

Conread position: 664-945
Cow position: chr22:12475978-12475697 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 220, 242

Conread position: 665-940
Cow position: chr22:14430058-14430333 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 149, 136

Conread position: 670-937
Cow position: chr22:12385333-12385066 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 47

Conread position: 670-937
Cow position: chr22:14468224-14468491 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 39

Conread position: 670-938
Cow position: chr22:46654430-46654698 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 12

Conread position: 670-940
Cow position: chr22:12431575-12431305 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 670-940
Cow position: chr22:14468140-14468410 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 145, 131

Conread position: 670-940
Cow position: chr22:46654262-46654532 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 12

Conread position: 670-945
Cow position: chr22:12432415-12432140 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 62

Conread position: 670-945
Cow position: chr22:12475804-12475529 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 670-945
Cow position: chr22:14429643-14429918 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 127, 132

Conread position: 670-945
Cow position: chr22:14429979-14430254 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 62

Conread position: 671-882
Cow position: chr22:11666697-11666908 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 130, 145

Conread position: 671-882
Cow position: chr22:11701435-11701646 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 130, 145

Conread position: 671-928
Cow position: chr22:12385164-12384907 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 44

Conread position: 671-936
Cow position: chr22:12458526-12458261 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 671-945
Cow position: chr22:11640856-11641130 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 671-945
Cow position: chr22:12432498-12432224 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 134

Conread position: 671-945
Cow position: chr22:12476391-12476117 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 129, 133

Conread position: 671-945
Cow position: chr22:12498868-12499142 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 129, 133

Conread position: 676-945
Cow position: chr22:12499293-12499562 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 208, 230

Conread position: 677-939
Cow position: chr22:12419023-12418761 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 678-945
Cow position: chr22:12431904-12431636 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 40

Conread position: 685-933
Cow position: chr22:46654025-46654273 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 49

Conread position: 685-945
Cow position: chr22:12431308-12431048 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 115, 128

Conread position: 687-940
Cow position: chr22:12431138-12430885 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 164
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 689-946
Cow position: chr22:12431808-12431551 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 111, 115

Conread position: 689-948
Cow position: chr22:12499474-12499733 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 705-945
Cow position: chr22:11640806-11641046 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 710-931
Cow position: chr22:12458403-12458183 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 216, 0

Conread position: 728-945
Cow position: chr22:12399789-12399572 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 729-945
Cow position: chr22:12399866-12399656 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 734-939
Cow position: chr22:11701414-11701619 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 737-939
Cow position: chr22:14467955-14468157 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 743-945
Cow position: chr22:12458118-12457916 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 59

Conread position: 746-940
Cow position: chr22:46654002-46654196 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 138, 148

Conread position: 760-939
Cow position: chr22:12419024-12418845 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.