Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050B04.5 |
| Conread position: | 629-945 |
| Cow position: | chr24:17078306-17077990 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 637-937 |
| Cow position: | chr24:17036163-17035863 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 163, 170 |
| Conread position: | 657-923 |
| Cow position: | chr24:17077774-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 81, 76 |
| Conread position: | 657-928 |
| Cow position: | chr24:17077858-17077587 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-932 |
| Cow position: | chr24:17013231-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-934 |
| Cow position: | chr24:17035303-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 228, 234 |
| Conread position: | 657-936 |
| Cow position: | chr24:17035471-17035192 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 143, 147 |
| Conread position: | 657-936 |
| Cow position: | chr24:17036059-17035780 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 143, 147 |
| Conread position: | 657-937 |
| Cow position: | chr24:17035891-17035611 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-937 |
| Cow position: | chr24:17036311-17036031 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 143, 147 |
| Conread position: | 657-937 |
| Cow position: | chr24:17036479-17036199 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 143, 147 |
| Conread position: | 657-938 |
| Cow position: | chr24:17035639-17035358 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-938 |
| Cow position: | chr24:17070778-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-940 |
| Cow position: | chr24:17013147-17013430 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 162, 152 |
| Conread position: | 657-940 |
| Cow position: | chr24:17035387-17035104 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 143, 148 |
| Conread position: | 657-940 |
| Cow position: | chr24:17070526-17070809 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-940 |
| Cow position: | chr24:17070694-17070977 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-945 |
| Cow position: | chr24:17036227-17035939 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 143, 147 |
| Conread position: | 657-945 |
| Cow position: | chr24:17078110-17077822 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 143, 147 |
| Conread position: | 658-938 |
| Cow position: | chr24:17070443-17070723 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-945 |
| Cow position: | chr24:17070611-17070898 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 225, 238 |
| Conread position: | 659-937 |
| Cow position: | chr24:17035721-17035443 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 659-937 |
| Cow position: | chr24:17077940-17077662 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 74 |
| Conread position: | 659-945 |
| Cow position: | chr24:17035553-17035267 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 141, 145 |
| Conread position: | 670-939 |
| Cow position: | chr24:17035962-17035693 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 670-939 |
| Cow position: | chr24:17078013-17077744 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 670-940 |
| Cow position: | chr24:17036382-17036112 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 204, 192 |
| Conread position: | 676-940 |
| Cow position: | chr24:17036544-17036280 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 686-938 |
| Cow position: | chr24:17070387-17070639 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 689-936 |
| Cow position: | chr24:17035775-17035528 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 726-939 |
| Cow position: | chr24:17078125-17077912 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 740-936 |
| Cow position: | chr24:17013146-17013342 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 65 |
Show alignments to all cow chromosomes.