Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B04.5

Conread position: 128-266
Cow position: chr7:11486455-11486591 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 62

Conread position: 341-477
Cow position: chr7:11488085-11488220 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 123
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 0

Conread position: 571-661
Cow position: chr7:11601776-11601686 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 618-940
Cow position: chr7:42879329-42879010 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 183, 36

Conread position: 626-946
Cow position: chr7:11434859-11434544 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 116, 8

Conread position: 646-948
Cow position: chr7:8243777-8244078 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 218

Conread position: 648-946
Cow position: chr7:3180343-3180641 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 655-945
Cow position: chr7:11601206-11600916 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 656-879
Cow position: chr7:8243872-8244092 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 162, 123

Conread position: 656-921
Cow position: chr7:11434505-11434240 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 82, 69

Conread position: 656-925
Cow position: chr7:8325891-8326163 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 68

Conread position: 656-933
Cow position: chr7:8243452-8243729 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 82

Conread position: 656-935
Cow position: chr7:8243033-8243312 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 177
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 83

Conread position: 656-937
Cow position: chr7:8243704-8243985 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 61, 80

Conread position: 656-940
Cow position: chr7:8277746-8278030 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 91, 69

Conread position: 656-940
Cow position: chr7:8325387-8325671 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 656-940
Cow position: chr7:11434666-11434389 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 72

Conread position: 656-945
Cow position: chr7:1014837-1015126 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 656-945
Cow position: chr7:8243620-8243909 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 656-945
Cow position: chr7:8325135-8325424 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 82, 66

Conread position: 656-945
Cow position: chr7:8325303-8325592 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 82

Conread position: 656-945
Cow position: chr7:8325639-8325928 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 69

Conread position: 656-945
Cow position: chr7:8325807-8326096 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 165, 154

Conread position: 656-946
Cow position: chr7:8242949-8243239 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 656-946
Cow position: chr7:8325051-8325341 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 656-946
Cow position: chr7:11434750-11434467 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 66

Conread position: 656-947
Cow position: chr7:8325555-8325846 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 66

Conread position: 656-948
Cow position: chr7:8324799-8325091 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 75, 60

Conread position: 657-867
Cow position: chr7:11600616-11600411 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 190, 0

Conread position: 657-879
Cow position: chr7:1440041-1440263 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 150, 135

Conread position: 657-880
Cow position: chr7:1439453-1439674 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 43

Conread position: 657-931
Cow position: chr7:3180604-3180877 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 59

Conread position: 657-933
Cow position: chr7:3179932-3180208 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 143, 148

Conread position: 657-936
Cow position: chr7:42879041-42878762 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 144, 150

Conread position: 657-937
Cow position: chr7:3179764-3180044 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 657-937
Cow position: chr7:42878621-42878341 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 143, 150

Conread position: 657-938
Cow position: chr7:1015006-1015287 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 59

Conread position: 657-938
Cow position: chr7:3180016-3180297 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 657-939
Cow position: chr7:42879125-42878843 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 657-940
Cow position: chr7:1014754-1015037 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 67, 60

Conread position: 657-940
Cow position: chr7:1439958-1440240 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 85, 11

Conread position: 657-940
Cow position: chr7:11600868-11600585 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 657-940
Cow position: chr7:11601036-11600753 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 657-940
Cow position: chr7:42878957-42878674 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 144, 150

Conread position: 657-945
Cow position: chr7:1014340-1014628 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 657-945
Cow position: chr7:1015090-1015378 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 657-945
Cow position: chr7:3180268-3180556 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 243, 249

Conread position: 657-945
Cow position: chr7:18390481-18390768 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 282, 0

Conread position: 657-948
Cow position: chr7:18390229-18390520 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 58

Conread position: 658-918
Cow position: chr7:11600699-11600439 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 46

Conread position: 658-937
Cow position: chr7:8325221-8325500 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 57

Conread position: 658-939
Cow position: chr7:11600951-11600670 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 658-939
Cow position: chr7:18390314-18390595 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 658-940
Cow position: chr7:3179849-3180131 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 658-940
Cow position: chr7:8325473-8325755 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 70

Conread position: 658-948
Cow position: chr7:8243119-8243408 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 28

Conread position: 659-935
Cow position: chr7:1015176-1015452 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 69, 49

Conread position: 659-936
Cow position: chr7:8278001-8278278 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 79, 58

Conread position: 659-937
Cow position: chr7:3180186-3180464 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 659-938
Cow position: chr7:42878787-42878508 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 659-940
Cow position: chr7:8277917-8278198 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 79

Conread position: 659-940
Cow position: chr7:42878871-42878590 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 659-945
Cow position: chr7:3180102-3180388 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 659-945
Cow position: chr7:11600782-11600496 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 659-945
Cow position: chr7:11601118-11600832 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 659-946
Cow position: chr7:3180438-3180725 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 81, 89

Conread position: 659-946
Cow position: chr7:8278253-8278538 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 185
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 58

Conread position: 660-939
Cow position: chr7:8324887-8325166 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 56

Conread position: 660-940
Cow position: chr7:8278170-8278450 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 78

Conread position: 660-940
Cow position: chr7:42879206-42878926 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 661-937
Cow position: chr7:1014926-1015202 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 661-938
Cow position: chr7:42878701-42878424 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 139, 145

Conread position: 664-932
Cow position: chr7:3180527-3180795 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 670-936
Cow position: chr7:1439806-1440068 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 7

Conread position: 670-940
Cow position: chr7:8278096-8278366 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 68, 46

Conread position: 670-945
Cow position: chr7:8243382-8243657 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 56

Conread position: 670-945
Cow position: chr7:8324729-8325004 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 72, 48

Conread position: 671-940
Cow position: chr7:1438414-1438683 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 172
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 10

Conread position: 671-940
Cow position: chr7:8277677-8277946 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 671-948
Cow position: chr7:42878523-42878244 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 44

Conread position: 676-883
Cow position: chr7:18390584-18390791 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 676-940
Cow position: chr7:8277598-8277862 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 40

Conread position: 676-940
Cow position: chr7:18390164-18390428 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 677-937
Cow position: chr7:18390417-18390677 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 677-946
Cow position: chr7:1014276-1014545 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 39, 46

Conread position: 685-939
Cow position: chr7:18390005-18390259 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 163
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 121, 129

Conread position: 689-945
Cow position: chr7:3179712-3179968 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 732-945
Cow position: chr7:11601213-11601000 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 737-938
Cow position: chr7:18390141-18390342 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 741-936
Cow position: chr7:11434504-11434309 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 741-945
Cow position: chr7:8277579-8277783 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 59

Conread position: 741-946
Cow position: chr7:8243621-8243826 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 741-946
Cow position: chr7:8277915-8278120 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 68

Conread position: 741-946
Cow position: chr7:8325808-8326013 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 743-936
Cow position: chr7:1014672-1014865 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 745-946
Cow position: chr7:1014260-1014461 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 62

Conread position: 754-945
Cow position: chr7:8277256-8277447 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.