Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050B04.5 |
| Conread position: | 656-948 |
| Cow position: | chrX:25310124-25310416 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 144, 153 |
| Conread position: | 657-932 |
| Cow position: | chrX:25324512-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-934 |
| Cow position: | chrX:25324848-25324571 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-936 |
| Cow position: | chrX:25310041-25310320 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 657-936 |
| Cow position: | chrX:25325016-25324737 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-937 |
| Cow position: | chrX:25325268-25324988 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-937 |
| Cow position: | chrX:25325520-25325240 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 143, 150 |
| Conread position: | 657-938 |
| Cow position: | chrX:25324932-25324651 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-939 |
| Cow position: | chrX:29045193-29044911 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 144, 150 |
| Conread position: | 657-940 |
| Cow position: | chrX:25309873-25310156 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 138, 150 |
| Conread position: | 657-940 |
| Cow position: | chrX:25309957-25310240 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 657-940 |
| Cow position: | chrX:25310293-25310576 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-940 |
| Cow position: | chrX:25324764-25324481 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-940 |
| Cow position: | chrX:25325184-25324901 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-940 |
| Cow position: | chrX:25325688-25325405 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 58 |
| Conread position: | 657-944 |
| Cow position: | chrX:29044941-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-940 |
| Cow position: | chrX:25309790-25310072 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-940 |
| Cow position: | chrX:25325435-25325153 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 659-938 |
| Cow position: | chrX:29045758-29045479 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 142, 148 |
| Conread position: | 659-940 |
| Cow position: | chrX:25310211-25310492 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 148, 141 |
| Conread position: | 659-940 |
| Cow position: | chrX:25324678-25324397 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 659-940 |
| Cow position: | chrX:25325098-25324817 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 65 |
| Conread position: | 659-940 |
| Cow position: | chrX:29045023-29044742 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 659-940 |
| Cow position: | chrX:29045107-29044826 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 659-946 |
| Cow position: | chrX:12627340-12627626 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 661-937 |
| Cow position: | chrX:25325348-25325072 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 661-940 |
| Cow position: | chrX:29045273-29044994 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 670-940 |
| Cow position: | chrX:29045831-29045561 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 671-938 |
| Cow position: | chrX:25324582-25324315 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 671-939 |
| Cow position: | chrX:12627436-12627702 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 671-940 |
| Cow position: | chrX:12627770-12628039 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 672-938 |
| Cow position: | chrX:25325589-25325323 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 685-940 |
| Cow position: | chrX:25309733-25309988 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 737-940 |
| Cow position: | chrX:25309701-25309904 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.