Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B18.3

Conread position: 341-521
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 129, 89

Conread position: 345-474
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 59

Conread position: 348-637
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 122, 8

Conread position: 351-541
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 143, 78

Conread position: 351-552
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 172, 5

Conread position: 353-579
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 141, 67

Conread position: 356-579
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 183, 73

Conread position: 357-559
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 183, 72

Conread position: 358-528
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 91

Conread position: 364-555
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 66

Conread position: 364-586
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 40

Conread position: 366-886
Cow position:
Alignm length: 549
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 66

Conread position: 367-702
Cow position:
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 183

Conread position: 368-706
Cow position:
Alignm length: 370
Alignm identity: 251
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 99, 61

Conread position: 371-890
Cow position:
Alignm length: 536
Alignm identity: 354
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 104, 57

Conread position: 372-542
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 59

Conread position: 372-595
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 156, 57

Conread position: 372-890
Cow position:
Alignm length: 542
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 48

Conread position: 374-595
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 58

Conread position: 376-552
Cow position:
Alignm length: 184
Alignm identity: 146
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 95, 55

Conread position: 376-619
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 54

Conread position: 376-819
Cow position:
Alignm length: 471
Alignm identity: 312
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 8, 49

Conread position: 377-667
Cow position:
Alignm length: 303
Alignm identity: 207
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 63

Conread position: 378-541
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 56

Conread position: 378-556
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 52

Conread position: 379-888
Cow position:
Alignm length: 543
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 49

Conread position: 380-525
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 44

Conread position: 380-706
Cow position:
Alignm length: 337
Alignm identity: 221
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 121, 51

Conread position: 380-862
Cow position:
Alignm length: 520
Alignm identity: 334
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 253

Conread position: 383-559
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 22

Conread position: 383-887
Cow position:
Alignm length: 518
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 44

Conread position: 385-595
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 70, 172

Conread position: 386-545
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 387-555
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 42

Conread position: 388-621
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 79, 113

Conread position: 388-829
Cow position:
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 32

Conread position: 389-642
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 40

Conread position: 389-833
Cow position:
Alignm length: 478
Alignm identity: 322
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 80, 40

Conread position: 390-586
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 41

Conread position: 390-865
Cow position:
Alignm length: 516
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 39

Conread position: 390-890
Cow position:
Alignm length: 525
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 89

Conread position: 391-764
Cow position:
Alignm length: 403
Alignm identity: 275
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 39

Conread position: 391-886
Cow position:
Alignm length: 525
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 39

Conread position: 392-550
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 77

Conread position: 392-890
Cow position:
Alignm length: 518
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 38

Conread position: 394-559
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 143, 34

Conread position: 394-559
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 37

Conread position: 394-633
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 26

Conread position: 394-826
Cow position:
Alignm length: 454
Alignm identity: 292
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 102

Conread position: 394-898
Cow position:
Alignm length: 516
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 396-865
Cow position:
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 34

Conread position: 396-870
Cow position:
Alignm length: 489
Alignm identity: 312
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 68, 33

Conread position: 396-885
Cow position:
Alignm length: 506
Alignm identity: 346
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 75, 38

Conread position: 396-894
Cow position:
Alignm length: 535
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 33

Conread position: 396-894
Cow position:
Alignm length: 539
Alignm identity: 364
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 35

Conread position: 397-645
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 24

Conread position: 400-550
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 94

Conread position: 400-661
Cow position:
Alignm length: 275
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 70, 31

Conread position: 400-832
Cow position:
Alignm length: 446
Alignm identity: 294
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 26

Conread position: 400-894
Cow position:
Alignm length: 519
Alignm identity: 341
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 34

Conread position: 404-551
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 90

Conread position: 404-706
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 25

Conread position: 404-743
Cow position:
Alignm length: 357
Alignm identity: 244
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 25

Conread position: 404-839
Cow position:
Alignm length: 462
Alignm identity: 309
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 63, 26

Conread position: 404-896
Cow position:
Alignm length: 536
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 38

Conread position: 405-885
Cow position:
Alignm length: 512
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 24

Conread position: 406-762
Cow position:
Alignm length: 376
Alignm identity: 246
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 28

Conread position: 406-858
Cow position:
Alignm length: 472
Alignm identity: 302
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 24

Conread position: 406-869
Cow position:
Alignm length: 488
Alignm identity: 311
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 26

Conread position: 406-894
Cow position:
Alignm length: 501
Alignm identity: 331
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 23

Conread position: 407-579
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 24

Conread position: 407-633
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 24

Conread position: 407-819
Cow position:
Alignm length: 426
Alignm identity: 282
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 17, 52

Conread position: 407-889
Cow position:
Alignm length: 510
Alignm identity: 344
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 13

Conread position: 408-862
Cow position:
Alignm length: 468
Alignm identity: 306
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 23

Conread position: 408-890
Cow position:
Alignm length: 492
Alignm identity: 313
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 113, 23

Conread position: 409-756
Cow position:
Alignm length: 356
Alignm identity: 228
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 29

Conread position: 410-900
Cow position:
Alignm length: 533
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 21

Conread position: 412-890
Cow position:
Alignm length: 500
Alignm identity: 340
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 19

Conread position: 415-607
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 14

Conread position: 417-885
Cow position:
Alignm length: 479
Alignm identity: 314
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 102, 14

Conread position: 425-559
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 431-897
Cow position:
Alignm length: 500
Alignm identity: 330
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 96, 19

Conread position: 432-890
Cow position:
Alignm length: 475
Alignm identity: 314
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 104

Conread position: 474-819
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 25

Conread position: 474-846
Cow position:
Alignm length: 402
Alignm identity: 275
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 6, 24

Conread position: 474-886
Cow position:
Alignm length: 428
Alignm identity: 290
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 6, 50

Conread position: 478-869
Cow position:
Alignm length: 415
Alignm identity: 279
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 90

Conread position: 479-884
Cow position:
Alignm length: 423
Alignm identity: 266
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 93

Conread position: 508-886
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 129, 25

Conread position: 544-869
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 28

Conread position: 554-890
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 43, 60

Conread position: 557-917
Cow position:
Alignm length: 392
Alignm identity: 266
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 288

Conread position: 589-890
Cow position:
Alignm length: 313
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 7

Conread position: 590-894
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 21

Conread position: 608-890
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 223

Conread position: 612-887
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 140

Conread position: 613-886
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 91

Conread position: 615-885
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 34, 11

Conread position: 615-914
Cow position:
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 648-894
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 184

Conread position: 671-829
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 157

Conread position: 671-869
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 156

Conread position: 671-869
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 88, 59

Conread position: 671-887
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 158

Conread position: 671-887
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 88, 25

Conread position: 671-890
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 155

Conread position: 671-890
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 671-895
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 81

Conread position: 671-900
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 59, 97

Conread position: 672-849
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 64

Conread position: 674-890
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 44

Conread position: 676-892
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 143

Conread position: 677-885
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 81, 51

Conread position: 679-887
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 109

Conread position: 679-896
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 51, 86

Conread position: 680-844
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 50

Conread position: 682-894
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 14

Conread position: 684-887
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 151

Conread position: 688-895
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 140

Conread position: 689-886
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 137

Conread position: 689-894
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 36, 138

Conread position: 691-890
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 109

Conread position: 697-844
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 31

Conread position: 699-893
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 127

Conread position: 713-865
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 75

Conread position: 713-888
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 110

Conread position: 725-894
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 80

Conread position: 732-861
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 91

Conread position: 733-851
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 90

Conread position: 737-890
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 91

Conread position: 756-894
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 59

Conread position: 766-892
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.