Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B18.3

Conread position: 313-542
Cow position:
Alignm length: 234
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 210, 13

Conread position: 345-548
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 125, 85

Conread position: 345-550
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 85

Conread position: 345-556
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 134, 93

Conread position: 345-890
Cow position:
Alignm length: 577
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 94

Conread position: 348-552
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 122, 55

Conread position: 352-541
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 115, 5

Conread position: 356-557
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 123, 73

Conread position: 358-432
Cow position:
Alignm length: 75
Alignm identity: 71
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 358-525
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 121, 72

Conread position: 358-551
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 49

Conread position: 360-525
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 134, 69

Conread position: 360-540
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 107, 142

Conread position: 360-555
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 107, 70

Conread position: 362-552
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 108, 0

Conread position: 366-561
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 65, 41

Conread position: 366-579
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 64

Conread position: 367-915
Cow position:
Alignm length: 581
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 135

Conread position: 368-535
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 62

Conread position: 368-538
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 56

Conread position: 368-557
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 64

Conread position: 368-559
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 61

Conread position: 369-558
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 168

Conread position: 372-552
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 9

Conread position: 372-556
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 58

Conread position: 372-828
Cow position:
Alignm length: 473
Alignm identity: 295
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 118, 56

Conread position: 373-564
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 57

Conread position: 373-578
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 97

Conread position: 374-804
Cow position:
Alignm length: 450
Alignm identity: 315
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 56, 157

Conread position: 376-547
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 71

Conread position: 376-869
Cow position:
Alignm length: 523
Alignm identity: 333
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 154

Conread position: 377-586
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 52

Conread position: 378-596
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 185

Conread position: 380-579
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 54

Conread position: 380-615
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 53

Conread position: 381-588
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 89, 48

Conread position: 381-643
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 38

Conread position: 381-842
Cow position:
Alignm length: 478
Alignm identity: 307
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 49

Conread position: 382-554
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 119, 47

Conread position: 382-595
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 47

Conread position: 383-654
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 24

Conread position: 384-540
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 46

Conread position: 385-550
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 386-541
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 44

Conread position: 388-554
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 41

Conread position: 388-756
Cow position:
Alignm length: 377
Alignm identity: 249
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 43

Conread position: 388-865
Cow position:
Alignm length: 498
Alignm identity: 335
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 204, 19

Conread position: 390-864
Cow position:
Alignm length: 495
Alignm identity: 327
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 77, 39

Conread position: 390-890
Cow position:
Alignm length: 514
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 89

Conread position: 391-564
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 110, 40

Conread position: 392-885
Cow position:
Alignm length: 515
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 42

Conread position: 393-586
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 146, 38

Conread position: 394-706
Cow position:
Alignm length: 330
Alignm identity: 219
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 37

Conread position: 395-633
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 36

Conread position: 396-552
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 37

Conread position: 396-716
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 107

Conread position: 396-851
Cow position:
Alignm length: 470
Alignm identity: 318
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 71, 35

Conread position: 396-869
Cow position:
Alignm length: 501
Alignm identity: 343
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 131, 19

Conread position: 397-574
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 38

Conread position: 398-551
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 398-619
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 31

Conread position: 398-633
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 9

Conread position: 398-832
Cow position:
Alignm length: 467
Alignm identity: 323
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 73, 36

Conread position: 398-890
Cow position:
Alignm length: 524
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 31

Conread position: 400-552
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 31

Conread position: 400-558
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 31

Conread position: 400-586
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 31

Conread position: 400-862
Cow position:
Alignm length: 478
Alignm identity: 297
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 30

Conread position: 400-869
Cow position:
Alignm length: 516
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 32

Conread position: 400-890
Cow position:
Alignm length: 499
Alignm identity: 319
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 147, 29

Conread position: 401-633
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 141

Conread position: 404-783
Cow position:
Alignm length: 405
Alignm identity: 266
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 27

Conread position: 404-860
Cow position:
Alignm length: 468
Alignm identity: 310
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 123, 26

Conread position: 404-865
Cow position:
Alignm length: 493
Alignm identity: 324
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 123, 26

Conread position: 404-887
Cow position:
Alignm length: 520
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 25

Conread position: 404-890
Cow position:
Alignm length: 497
Alignm identity: 316
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 63, 27

Conread position: 406-644
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 25

Conread position: 406-803
Cow position:
Alignm length: 412
Alignm identity: 269
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 25

Conread position: 406-853
Cow position:
Alignm length: 458
Alignm identity: 305
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 25

Conread position: 408-890
Cow position:
Alignm length: 514
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 22

Conread position: 410-886
Cow position:
Alignm length: 499
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 9

Conread position: 414-887
Cow position:
Alignm length: 490
Alignm identity: 338
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 125

Conread position: 415-886
Cow position:
Alignm length: 505
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 16

Conread position: 417-894
Cow position:
Alignm length: 492
Alignm identity: 329
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 48, 14

Conread position: 432-724
Cow position:
Alignm length: 299
Alignm identity: 194
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 47

Conread position: 441-862
Cow position:
Alignm length: 447
Alignm identity: 291
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 112

Conread position: 483-893
Cow position:
Alignm length: 436
Alignm identity: 299
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 44, 264

Conread position: 496-887
Cow position:
Alignm length: 425
Alignm identity: 295
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 10, 359

Conread position: 499-895
Cow position:
Alignm length: 425
Alignm identity: 289
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 26

Conread position: 508-887
Cow position:
Alignm length: 403
Alignm identity: 279
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 18, 48

Conread position: 536-885
Cow position:
Alignm length: 366
Alignm identity: 248
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 16

Conread position: 563-890
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 94

Conread position: 595-817
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 107

Conread position: 596-887
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 30

Conread position: 606-894
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 232

Conread position: 607-890
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 131

Conread position: 607-890
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 231

Conread position: 631-878
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 16

Conread position: 631-890
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 69

Conread position: 634-895
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 196

Conread position: 654-890
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 17

Conread position: 661-865
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 69, 47

Conread position: 670-859
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 87, 58

Conread position: 670-915
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 150

Conread position: 671-822
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 671-851
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 72

Conread position: 671-865
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 132

Conread position: 671-870
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 59

Conread position: 671-886
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 159

Conread position: 671-886
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 155

Conread position: 671-890
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 135

Conread position: 671-890
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 59, 162

Conread position: 671-890
Cow position:
Alignm length: 229
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 161

Conread position: 671-892
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 60

Conread position: 673-880
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 36

Conread position: 673-890
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 112

Conread position: 680-890
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 53

Conread position: 685-860
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 143

Conread position: 685-894
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 125

Conread position: 699-886
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 29

Conread position: 708-869
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 122

Conread position: 713-870
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 24

Conread position: 713-890
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 39

Conread position: 714-887
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 14

Conread position: 715-881
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 53

Conread position: 729-957
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 99

Conread position: 732-890
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 93

Conread position: 733-890
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 93

Conread position: 750-890
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 73

Conread position: 757-913
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 758-865
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 66

Show alignments to all cow chromosomes.