Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B18.3

Conread position: 345-463
Cow position: chr11:70278905-70278790 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 349-850
Cow position: chr11:50437706-50437181 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 343
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 11

Conread position: 356-556
Cow position: chr11:10620647-10620441 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 123, 74

Conread position: 356-619
Cow position: chr11:46772876-46772601 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 119, 51

Conread position: 358-541
Cow position: chr11:50778050-50778241 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 358-551
Cow position: chr11:42519425-42519618 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 109, 63

Conread position: 358-552
Cow position: chr11:20491254-20491447 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 71

Conread position: 360-550
Cow position: chr11:65827049-65826864 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 165, 70

Conread position: 366-544
Cow position: chr11:8828940-8828757 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 113, 64

Conread position: 366-890
Cow position: chr11:45651294-45650782 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 42

Conread position: 370-512
Cow position: chr11:67600460-67600605 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 60

Conread position: 370-541
Cow position: chr11:46580059-46580223 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 145, 60

Conread position: 372-700
Cow position: chr11:5221722-5221374 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 46

Conread position: 373-544
Cow position: chr11:48982809-48982980 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 97, 127

Conread position: 374-556
Cow position: chr11:21844436-21844249 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 99, 54

Conread position: 376-525
Cow position: chr11:50589786-50589937 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 54

Conread position: 376-579
Cow position: chr11:25165144-25165347 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 118, 54

Conread position: 377-556
Cow position: chr11:63920588-63920405 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 52

Conread position: 380-556
Cow position: chr11:43430744-43430569 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 50

Conread position: 381-558
Cow position: chr11:14949703-14949519 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 86, 172

Conread position: 384-542
Cow position: chr11:7334015-7333854 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 46

Conread position: 384-851
Cow position: chr11:77193985-77193517 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 332
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 254, 55

Conread position: 389-641
Cow position: chr11:72789843-72789591 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 40

Conread position: 390-707
Cow position: chr11:42323821-42323490 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 217
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 115

Conread position: 390-865
Cow position: chr11:21886823-21886330 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 107

Conread position: 390-869
Cow position: chr11:24314273-24314732 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 332
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 77, 44

Conread position: 391-887
Cow position: chr11:27666465-27665939 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 358
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 116

Conread position: 391-887
Cow position: chr11:80809933-80809421 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 339
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 80, 43

Conread position: 392-556
Cow position: chr11:71846634-71846462 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 39

Conread position: 392-579
Cow position: chr11:62019884-62019688 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 37

Conread position: 392-861
Cow position: chr11:51020033-51020514 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 315
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 38

Conread position: 392-886
Cow position: chr11:62040592-62040089 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 329
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 83, 22

Conread position: 393-903
Cow position: chr11:26585694-26586218 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 350
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 74, 41

Conread position: 394-579
Cow position: chr11:29947210-29947026 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 37

Conread position: 395-726
Cow position: chr11:49181395-49181735 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 214
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 36

Conread position: 396-890
Cow position: chr11:29014114-29014629 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 33

Conread position: 397-559
Cow position: chr11:50951270-50951436 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 34

Conread position: 398-727
Cow position: chr11:49074573-49074224 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 204

Conread position: 398-881
Cow position: chr11:55354639-55354155 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 334
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 53

Conread position: 398-897
Cow position: chr11:81337252-81336710 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 399-556
Cow position: chr11:46746357-46746512 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 21

Conread position: 400-604
Cow position: chr11:69119022-69119235 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 31

Conread position: 400-890
Cow position: chr11:35506598-35507073 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 341
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 101, 34

Conread position: 400-894
Cow position: chr11:44244380-44243859 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 352
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 129

Conread position: 401-886
Cow position: chr11:31125995-31126471 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 340
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 33

Conread position: 401-895
Cow position: chr11:44333968-44334454 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 347
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 53

Conread position: 404-542
Cow position: chr11:76768092-76768236 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 25

Conread position: 404-761
Cow position: chr11:43989543-43989157 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 27

Conread position: 404-877
Cow position: chr11:49216521-49216995 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 30

Conread position: 404-890
Cow position: chr11:53307234-53306745 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 312
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 145

Conread position: 406-701
Cow position: chr11:48484394-48484083 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 23

Conread position: 406-737
Cow position: chr11:35920046-35919706 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 65, 25

Conread position: 406-830
Cow position: chr11:11594875-11595322 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 406-847
Cow position: chr11:3681166-3680723 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 23

Conread position: 406-886
Cow position: chr11:8019711-8020180 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 328
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 28

Conread position: 407-894
Cow position: chr11:80002766-80003288 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 27

Conread position: 408-579
Cow position: chr11:45898325-45898148 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 44

Conread position: 414-869
Cow position: chr11:21922212-21922670 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 17

Conread position: 415-642
Cow position: chr11:51177240-51177483 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 16

Conread position: 431-862
Cow position: chr11:42682884-42682459 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 292
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 223, 66

Conread position: 441-860
Cow position: chr11:50134386-50133962 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 286
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 39

Conread position: 473-865
Cow position: chr11:31206065-31206491 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 289
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 55, 23

Conread position: 479-862
Cow position: chr11:2812986-2813375 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 259
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 44

Conread position: 516-875
Cow position: chr11:21544217-21544583 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 249
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 129, 48

Conread position: 594-894
Cow position: chr11:9063287-9062983 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 76

Conread position: 606-863
Cow position: chr11:25379605-25379336 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 229

Conread position: 606-885
Cow position: chr11:15361101-15361379 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 43

Conread position: 607-849
Cow position: chr11:71294757-71295012 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 183

Conread position: 607-869
Cow position: chr11:4484734-4484464 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 43

Conread position: 613-865
Cow position: chr11:32317401-32317141 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 37

Conread position: 619-826
Cow position: chr11:80006916-80006703 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 208

Conread position: 670-865
Cow position: chr11:54668831-54669029 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 60, 151

Conread position: 670-869
Cow position: chr11:64083124-64083316 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 21

Conread position: 671-817
Cow position: chr11:43839506-43839654 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 128

Conread position: 671-864
Cow position: chr11:12010983-12011173 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 98

Conread position: 671-865
Cow position: chr11:53270506-53270312 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 76, 155

Conread position: 671-869
Cow position: chr11:60008219-60008422 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 36

Conread position: 671-869
Cow position: chr11:86925312-86925115 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 158

Conread position: 671-886
Cow position: chr11:84829751-84829539 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 128

Conread position: 671-890
Cow position: chr11:18370929-18371145 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 33

Conread position: 671-890
Cow position: chr11:21849994-21849782 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 100, 0

Conread position: 672-889
Cow position: chr11:48930403-48930197 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 56

Conread position: 677-865
Cow position: chr11:31166934-31167121 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 76

Conread position: 681-890
Cow position: chr11:7443380-7443173 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 54, 146

Conread position: 696-909
Cow position: chr11:48483938-48483713 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 135

Conread position: 697-890
Cow position: chr11:12998894-12999093 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 136

Conread position: 697-890
Cow position: chr11:13828820-13828635 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 38

Conread position: 700-863
Cow position: chr11:9550445-9550276 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 129

Conread position: 722-865
Cow position: chr11:52027640-52027491 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 107

Conread position: 728-927
Cow position: chr11:45940270-45940066 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 101

Conread position: 732-894
Cow position: chr11:13216135-13216301 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 94

Show alignments to all cow chromosomes.