Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B18.3

Conread position: 309-542
Cow position: chr13:7262729-7262492 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 45

Conread position: 326-586
Cow position: chr13:9247032-9246771 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 97

Conread position: 345-548
Cow position: chr13:9570282-9570086 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 81

Conread position: 348-555
Cow position: chr13:52879698-52879494 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 48

Conread position: 351-890
Cow position: chr13:19451438-19451972 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 5

Conread position: 356-566
Cow position: chr13:42200906-42200693 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 73

Conread position: 356-633
Cow position: chr13:21694271-21694549 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 19

Conread position: 360-545
Cow position: chr13:6621314-6621504 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 70

Conread position: 364-552
Cow position: chr13:48251712-48251895 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 366-556
Cow position: chr13:14063250-14063438 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 65

Conread position: 368-463
Cow position: chr13:53069741-53069647 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 368-576
Cow position: chr13:57745824-57746032 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 61

Conread position: 369-873
Cow position: chr13:18056585-18056087 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 334
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 7

Conread position: 370-542
Cow position: chr13:43594842-43595013 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 103, 59

Conread position: 371-552
Cow position: chr13:9665348-9665153 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 59

Conread position: 371-595
Cow position: chr13:4604564-4604326 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 53

Conread position: 372-586
Cow position: chr13:30693973-30693760 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 58

Conread position: 372-760
Cow position: chr13:26255681-26255294 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 260
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 61

Conread position: 374-544
Cow position: chr13:25927062-25926889 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 56

Conread position: 374-552
Cow position: chr13:30673874-30674056 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 56

Conread position: 375-739
Cow position: chr13:40789188-40789560 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 245
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 92, 56

Conread position: 376-734
Cow position: chr13:8498450-8498815 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 245
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 154, 55

Conread position: 380-762
Cow position: chr13:43849046-43848659 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 256
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 54

Conread position: 380-813
Cow position: chr13:11316293-11316731 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 49

Conread position: 382-559
Cow position: chr13:29631114-29630938 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 48

Conread position: 382-593
Cow position: chr13:29671179-29671379 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 48

Conread position: 384-579
Cow position: chr13:25261547-25261747 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 166

Conread position: 386-687
Cow position: chr13:52379499-52379807 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 74, 44

Conread position: 387-550
Cow position: chr13:16343943-16343776 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 43

Conread position: 389-556
Cow position: chr13:19556007-19555838 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 42

Conread position: 389-814
Cow position: chr13:28844878-28844452 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 275
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 199, 15

Conread position: 389-851
Cow position: chr13:179248-179709 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 327
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 82, 42

Conread position: 389-887
Cow position: chr13:26983872-26983383 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 40

Conread position: 390-545
Cow position: chr13:3315419-3315581 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 390-633
Cow position: chr13:3480001-3479746 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 164

Conread position: 392-585
Cow position: chr13:17886753-17886551 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 81, 41

Conread position: 393-728
Cow position: chr13:33049074-33048740 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 224
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 110, 36

Conread position: 393-894
Cow position: chr13:30773162-30772630 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 14

Conread position: 394-585
Cow position: chr13:15957055-15956856 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 157

Conread position: 394-586
Cow position: chr13:35853100-35853296 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 35

Conread position: 394-658
Cow position: chr13:10755166-10754906 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 35

Conread position: 394-728
Cow position: chr13:60221184-60221529 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 72, 37

Conread position: 394-793
Cow position: chr13:11025678-11025287 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 35, 160

Conread position: 395-635
Cow position: chr13:47852281-47852034 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 36

Conread position: 395-761
Cow position: chr13:4546603-4546212 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 72, 36

Conread position: 395-821
Cow position: chr13:37622058-37621635 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 288
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 41

Conread position: 396-580
Cow position: chr13:38277889-38278073 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 122, 35

Conread position: 396-703
Cow position: chr13:48626993-48626677 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 34

Conread position: 398-552
Cow position: chr13:37516890-37517046 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 33

Conread position: 398-627
Cow position: chr13:24373650-24373415 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 177

Conread position: 399-625
Cow position: chr13:18963234-18963003 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 32

Conread position: 400-556
Cow position: chr13:33352123-33352281 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 31

Conread position: 400-999
Cow position: chr13:25882982-25883601 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 415
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 71, 20

Conread position: 401-751
Cow position: chr13:6651019-6651385 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 32

Conread position: 401-894
Cow position: chr13:20792690-20792215 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 327
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 66, 33

Conread position: 404-885
Cow position: chr13:4441783-4441283 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 341
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 63, 19

Conread position: 406-646
Cow position: chr13:17982027-17981775 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 23

Conread position: 406-890
Cow position: chr13:6178108-6178630 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 358
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 8

Conread position: 406-890
Cow position: chr13:11570925-11570420 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 23

Conread position: 406-894
Cow position: chr13:16041272-16040760 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 28

Conread position: 416-585
Cow position: chr13:43384406-43384580 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 54, 17

Conread position: 417-886
Cow position: chr13:11523229-11522756 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 322
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 7, 133

Conread position: 422-840
Cow position: chr13:24739729-24740149 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 290
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 17

Conread position: 431-890
Cow position: chr13:4947621-4947122 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 337
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 435

Conread position: 443-890
Cow position: chr13:47287119-47287577 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 311
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 59

Conread position: 447-910
Cow position: chr13:46131887-46131422 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 310
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 150, 20

Conread position: 479-869
Cow position: chr13:3564432-3564040 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 263
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 128, 49

Conread position: 508-890
Cow position: chr13:17127587-17127188 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 24

Conread position: 557-885
Cow position: chr13:46710862-46711209 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 110

Conread position: 588-890
Cow position: chr13:21677267-21676958 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 45

Conread position: 595-874
Cow position: chr13:9714673-9714958 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 43, 100

Conread position: 601-899
Cow position: chr13:56516753-56516442 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 13

Conread position: 607-843
Cow position: chr13:57313930-57313688 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 43

Conread position: 613-865
Cow position: chr13:1639148-1639408 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 199

Conread position: 614-865
Cow position: chr13:33767768-33767519 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 202

Conread position: 632-890
Cow position: chr13:19427132-19427409 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 17, 206

Conread position: 650-851
Cow position: chr13:9083450-9083664 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 186

Conread position: 671-884
Cow position: chr13:61121481-61121690 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 108

Conread position: 671-886
Cow position: chr13:20490266-20490051 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 39

Conread position: 671-904
Cow position: chr13:16342897-16342664 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 19

Conread position: 674-887
Cow position: chr13:37829430-37829627 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 674-890
Cow position: chr13:22976928-22976714 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 56, 29

Conread position: 677-865
Cow position: chr13:18052341-18052536 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 153

Conread position: 679-832
Cow position: chr13:17271725-17271878 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 125

Conread position: 685-865
Cow position: chr13:29671685-29671870 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 13

Conread position: 705-891
Cow position: chr13:1424058-1424249 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 85

Conread position: 713-861
Cow position: chr13:26011056-26011211 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 22

Conread position: 728-865
Cow position: chr13:9167336-9167477 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 99

Conread position: 729-899
Cow position: chr13:31453812-31453639 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 95

Conread position: 732-887
Cow position: chr13:11921331-11921485 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 93

Conread position: 756-893
Cow position: chr13:32985789-32985922 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 69

Show alignments to all cow chromosomes.