Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8050B18.3
        

               Conread position:
               354-570
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               117, 77
               

               Conread position:
               356-547
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               356-550
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               115, 73
               

               Conread position:
               356-569
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               114, 73
               

               Conread position:
               358-542
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               110, 72
               

               Conread position:
               358-547
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               165, 66
               

               Conread position:
               358-552
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 123
               

               Conread position:
               358-556
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               143, 72
               

               Conread position:
               358-579
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               110, 73
               

               Conread position:
               364-579
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               110, 66
               

               Conread position:
               366-560
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               112, 64
               

               Conread position:
               367-620
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               160, 64
               

               Conread position:
               368-511
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 65
               

               Conread position:
               372-542
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               99, 59
               

               Conread position:
               372-550
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               372-580
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               148, 57
               

               Conread position:
               372-868
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 76
               

               Conread position:
               378-552
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               148, 52
               

               Conread position:
               378-579
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               92, 52
               

               Conread position:
               379-869
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               327
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               380-595
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               75, 49
               

               Conread position:
               382-545
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               145, 47
               

               Conread position:
               387-604
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               88, 42
               

               Conread position:
               388-559
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               392-553
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 78
               

               Conread position:
               392-557
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               394-585
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               394-837
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 35
               

               Conread position:
               398-559
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 31
               

               Conread position:
               398-776
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               398-890
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               399-559
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               404-894
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               407-837
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               304
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               407-894
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 24
               

               Conread position:
               415-890
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               355
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               425-594
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               428-706
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               460-886
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               305
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               522-781
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               557-815
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               557-849
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 107
               

               Conread position:
               557-886
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               6, 172
               

               Conread position:
               570-860
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               603-872
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               35, 232
               

               Conread position:
               613-804
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               613-890
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               670-890
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               671-887
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               59, 107
               

               Conread position:
               671-897
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               671-900
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               673-894
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               86, 55
               

               Conread position:
               674-869
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               689-885
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               693-890
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 137
               

               Conread position:
               714-890
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               715-894
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 114
               

               Conread position:
               719-876
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               729-898
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 97
               
Show alignments to all cow chromosomes.