Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8050B18.3
        

               Conread position:
               346-894
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               371
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               352-545
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               5, 66
               

               Conread position:
               356-743
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               111, 73
               

               Conread position:
               358-527
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 70
               

               Conread position:
               358-552
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               112, 72
               

               Conread position:
               362-463
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               366-632
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               122, 63
               

               Conread position:
               372-552
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               372-579
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               374-551
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               97, 57
               

               Conread position:
               374-579
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               375-833
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 57
               

               Conread position:
               376-555
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               94, 54
               

               Conread position:
               377-924
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               378-562
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               123, 51
               

               Conread position:
               380-558
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               151, 50
               

               Conread position:
               380-595
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               382-887
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 152
               

               Conread position:
               384-560
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               385-552
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               385-628
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               386-585
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               85, 116
               

               Conread position:
               387-544
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               85, 44
               

               Conread position:
               389-545
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 42
               

               Conread position:
               389-627
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               236, 150
               

               Conread position:
               390-578
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 175
               

               Conread position:
               390-633
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               77, 40
               

               Conread position:
               390-887
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               349
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               81, 41
               

               Conread position:
               391-571
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 42
               

               Conread position:
               392-629
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 39
               

               Conread position:
               393-555
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               394-675
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               394-894
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               396-585
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 62
               

               Conread position:
               396-890
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               338
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               397-566
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               97, 34
               

               Conread position:
               399-861
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               333
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               404-579
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               404-623
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               404-708
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               404-742
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               67, 25
               

               Conread position:
               404-815
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               404-887
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               338
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               67, 25
               

               Conread position:
               516-904
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               540-887
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               614-890
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               35, 166
               

               Conread position:
               614-890
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               651-847
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               664-885
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 120
               

               Conread position:
               671-862
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 95
               

               Conread position:
               671-897
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 152
               

               Conread position:
               671-899
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               59, 158
               

               Conread position:
               673-865
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               57, 125
               

               Conread position:
               675-829
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               675-870
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 92
               

               Conread position:
               685-849
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 144
               

               Conread position:
               691-890
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 195
               

               Conread position:
               697-890
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 134
               

               Conread position:
               729-890
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               733-865
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 23
               
Show alignments to all cow chromosomes.