Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8050B18.3
        

               Conread position:
               356-545
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               114, 74
               

               Conread position:
               356-556
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               361-579
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               103, 67
               

               Conread position:
               361-628
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               22, 111
               

               Conread position:
               365-556
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               136, 64
               

               Conread position:
               366-781
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 22
               

               Conread position:
               367-625
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               64, 127
               

               Conread position:
               369-556
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 61
               

               Conread position:
               370-541
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               103, 54
               

               Conread position:
               370-579
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               110, 63
               

               Conread position:
               372-556
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               129, 59
               

               Conread position:
               372-612
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               95, 58
               

               Conread position:
               374-559
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               139, 56
               

               Conread position:
               374-759
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               51, 223
               

               Conread position:
               380-586
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 51
               

               Conread position:
               380-890
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               382-579
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               88, 48
               

               Conread position:
               383-641
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               88, 48
               

               Conread position:
               383-887
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 120
               

               Conread position:
               388-558
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 43
               

               Conread position:
               391-628
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               392-556
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               109, 93
               

               Conread position:
               392-579
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               393-706
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               74, 107
               

               Conread position:
               394-586
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 107
               

               Conread position:
               395-559
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 36
               

               Conread position:
               396-562
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               74, 35
               

               Conread position:
               397-899
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               370
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               70, 33
               

               Conread position:
               398-629
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               398-841
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               399-887
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               400-578
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 85
               

               Conread position:
               400-707
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               405-894
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               353
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               406-869
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               408-889
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               412-890
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               330
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               415-674
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               474-844
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               474-890
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               545-851
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               579-885
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               581-884
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               581-885
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               7, 257
               

               Conread position:
               586-890
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               6, 88
               

               Conread position:
               593-853
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               9, 199
               

               Conread position:
               605-890
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               33, 229
               

               Conread position:
               619-862
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               630-890
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               636-894
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               670-884
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 156
               

               Conread position:
               671-869
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               672-886
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               58, 135
               

               Conread position:
               672-890
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 54
               

               Conread position:
               673-890
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               86, 54
               

               Conread position:
               675-884
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               676-890
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 109
               

               Conread position:
               698-858
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               699-890
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               699-894
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 128
               

               Conread position:
               725-890
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 102
               

               Conread position:
               756-865
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               757-890
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               65, 0
               
Show alignments to all cow chromosomes.