Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B18.3

Conread position: 346-520
Cow position: chr23:34612097-34611922 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 6, 85

Conread position: 350-890
Cow position: chr23:9392951-9392410 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 13

Conread position: 358-556
Cow position: chr23:29242643-29242854 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 114

Conread position: 361-894
Cow position: chr23:12003978-12004527 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 367
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 53

Conread position: 363-570
Cow position: chr23:26948896-26949114 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 115, 68

Conread position: 364-865
Cow position: chr23:11932942-11933454 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 68

Conread position: 368-553
Cow position: chr23:26795193-26795010 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 62

Conread position: 374-538
Cow position: chr23:29742101-29742273 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 376-541
Cow position: chr23:11209728-11209898 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 54

Conread position: 378-776
Cow position: chr23:11054839-11055214 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 53

Conread position: 383-745
Cow position: chr23:30912569-30912184 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 47

Conread position: 384-555
Cow position: chr23:8063280-8063458 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 69

Conread position: 384-557
Cow position: chr23:38414230-38414056 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 95, 46

Conread position: 387-549
Cow position: chr23:2041550-2041715 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 44

Conread position: 387-562
Cow position: chr23:9711859-9711684 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 43

Conread position: 390-545
Cow position: chr23:14896070-14895909 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 39

Conread position: 392-558
Cow position: chr23:38455450-38455279 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 75, 39

Conread position: 392-579
Cow position: chr23:16610075-16609883 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 38

Conread position: 392-726
Cow position: chr23:19166862-19167209 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 39

Conread position: 393-894
Cow position: chr23:25565939-25566451 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 342
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 74, 95

Conread position: 394-579
Cow position: chr23:26462112-26461926 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 37

Conread position: 394-865
Cow position: chr23:7289468-7288977 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 37

Conread position: 394-865
Cow position: chr23:28831376-28831820 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 334
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 86, 34

Conread position: 394-886
Cow position: chr23:9421206-9420702 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 101

Conread position: 396-586
Cow position: chr23:15728949-15728750 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 35

Conread position: 398-556
Cow position: chr23:13511474-13511639 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 81, 33

Conread position: 398-583
Cow position: chr23:21630976-21631161 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 117, 77

Conread position: 399-861
Cow position: chr23:39899134-39899629 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 341
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 68, 32

Conread position: 400-845
Cow position: chr23:11973602-11974063 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 312
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 64, 41

Conread position: 401-869
Cow position: chr23:778217-777717 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 30

Conread position: 404-552
Cow position: chr23:12408764-12408612 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 27

Conread position: 405-644
Cow position: chr23:8930363-8930121 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 93

Conread position: 409-768
Cow position: chr23:28046836-28047201 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 25

Conread position: 409-786
Cow position: chr23:27990961-27991347 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 25

Conread position: 409-860
Cow position: chr23:28199800-28200271 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 319
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 25

Conread position: 431-771
Cow position: chr23:15723350-15723685 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 232
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 106

Conread position: 431-815
Cow position: chr23:28044572-28044967 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 261
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 71

Conread position: 449-890
Cow position: chr23:40920390-40920836 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 474-887
Cow position: chr23:32194933-32194536 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 273
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 25

Conread position: 502-869
Cow position: chr23:31026416-31026032 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 13, 48

Conread position: 507-890
Cow position: chr23:35270415-35270783 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 131, 25

Conread position: 545-834
Cow position: chr23:38107196-38107498 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 5, 23

Conread position: 597-869
Cow position: chr23:37639560-37639281 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 151

Conread position: 601-804
Cow position: chr23:9470579-9470354 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 212

Conread position: 611-864
Cow position: chr23:14276930-14276678 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 39

Conread position: 633-860
Cow position: chr23:40539089-40538856 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 198

Conread position: 671-851
Cow position: chr23:40498849-40499033 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 139

Conread position: 671-855
Cow position: chr23:7709174-7709366 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 143

Conread position: 671-864
Cow position: chr23:15289825-15290016 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 21

Conread position: 671-865
Cow position: chr23:5418691-5418889 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 131

Conread position: 671-869
Cow position: chr23:19913742-19913542 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 25

Conread position: 677-886
Cow position: chr23:26184317-26184102 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 112

Conread position: 680-890
Cow position: chr23:35383968-35383746 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 153

Conread position: 681-815
Cow position: chr23:28846853-28846989 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 49

Conread position: 693-890
Cow position: chr23:4602236-4602038 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 121

Conread position: 714-890
Cow position: chr23:18154616-18154792 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 16, 112

Conread position: 718-889
Cow position: chr23:1529898-1529721 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 109

Conread position: 733-890
Cow position: chr23:11093283-11093442 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 95

Show alignments to all cow chromosomes.