Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050B18.3 |
| Conread position: | 345-552 |
| Cow position: | chr25:24406055-24405844 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 358-554 |
| Cow position: | chr25:10449002-10448813 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 362-579 |
| Cow position: | chr25:35612600-35612383 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 68 |
| Conread position: | 372-894 |
| Cow position: | chr25:23772498-23771969 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 376-579 |
| Cow position: | chr25:33978486-33978295 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 383-525 |
| Cow position: | chr25:16691239-16691383 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 383-541 |
| Cow position: | chr25:36037058-36036897 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 47 |
| Conread position: | 387-542 |
| Cow position: | chr25:14196581-14196744 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 388-607 |
| Cow position: | chr25:22910117-22909894 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 391-552 |
| Cow position: | chr25:26087245-26087413 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 392-552 |
| Cow position: | chr25:36761837-36761999 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 37 |
| Conread position: | 392-647 |
| Cow position: | chr25:5568003-5567750 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 392-860 |
| Cow position: | chr25:21961275-21960804 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 134, 39 |
| Conread position: | 400-863 |
| Cow position: | chr25:9625546-9626022 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 153 |
| Conread position: | 400-887 |
| Cow position: | chr25:41044555-41045045 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 404-894 |
| Cow position: | chr25:18262684-18262185 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 406-647 |
| Cow position: | chr25:4049777-4050017 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 423-723 |
| Cow position: | chr25:32472168-32472498 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 153 |
| Conread position: | 557-861 |
| Cow position: | chr25:11962049-11962367 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 603-839 |
| Cow position: | chr25:12440159-12440397 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 37, 134 |
| Conread position: | 631-887 |
| Cow position: | chr25:9573190-9572919 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 211 |
| Conread position: | 669-869 |
| Cow position: | chr25:25716170-25716366 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 671-885 |
| Cow position: | chr25:21225413-21225634 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 163 |
| Conread position: | 671-887 |
| Cow position: | chr25:17726891-17726690 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 672-869 |
| Cow position: | chr25:33094371-33094563 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 675-858 |
| Cow position: | chr25:35262525-35262337 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 680-890 |
| Cow position: | chr25:33402498-33402705 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 120 |
| Conread position: | 691-870 |
| Cow position: | chr25:11188826-11189005 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 39, 116 |
| Conread position: | 706-890 |
| Cow position: | chr25:33953666-33953482 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 120 |
| Conread position: | 708-890 |
| Cow position: | chr25:40828865-40828680 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 22, 121 |
Show alignments to all cow chromosomes.