Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050B18.3 |
| Conread position: | 345-542 |
| Cow position: | chr26:14924202-14924386 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 166, 85 |
| Conread position: | 345-620 |
| Cow position: | chr26:2409003-2408729 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 132, 59 |
| Conread position: | 348-579 |
| Cow position: | chr26:16921643-16921878 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 351-561 |
| Cow position: | chr26:22622690-22622905 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 71, 6 |
| Conread position: | 359-559 |
| Cow position: | chr26:1673771-1673969 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 120, 58 |
| Conread position: | 360-638 |
| Cow position: | chr26:5394379-5394656 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 73, 176 |
| Conread position: | 368-595 |
| Cow position: | chr26:34035401-34035620 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 371-554 |
| Cow position: | chr26:33011930-33011754 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 374-549 |
| Cow position: | chr26:12254381-12254565 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 374-579 |
| Cow position: | chr26:613941-613739 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 105, 124 |
| Conread position: | 375-545 |
| Cow position: | chr26:25442157-25441982 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 55 |
| Conread position: | 376-579 |
| Cow position: | chr26:19769351-19769145 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 54 |
| Conread position: | 377-579 |
| Cow position: | chr26:17675995-17675793 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 144, 53 |
| Conread position: | 384-550 |
| Cow position: | chr26:14080459-14080626 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 384-701 |
| Cow position: | chr26:34031843-34032190 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 386-569 |
| Cow position: | chr26:2246692-2246882 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 386-865 |
| Cow position: | chr26:19537250-19537751 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 387-559 |
| Cow position: | chr26:5685190-5685365 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 390-578 |
| Cow position: | chr26:17604847-17605042 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 393-886 |
| Cow position: | chr26:2725319-2724832 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 394-829 |
| Cow position: | chr26:12654857-12655294 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 395-588 |
| Cow position: | chr26:28479457-28479662 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 127, 84 |
| Conread position: | 396-558 |
| Cow position: | chr26:13801865-13802031 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 396-826 |
| Cow position: | chr26:14429386-14428954 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 399-612 |
| Cow position: | chr26:20129919-20129685 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 400-639 |
| Cow position: | chr26:22657460-22657218 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 400-740 |
| Cow position: | chr26:14359356-14358987 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 401-865 |
| Cow position: | chr26:23782429-23782908 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 30 |
| Conread position: | 404-624 |
| Cow position: | chr26:20186002-20186235 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 213 |
| Conread position: | 404-860 |
| Cow position: | chr26:26665994-26665529 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 406-675 |
| Cow position: | chr26:9079148-9079418 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 118 |
| Conread position: | 410-750 |
| Cow position: | chr26:35580161-35580505 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 410-832 |
| Cow position: | chr26:19791326-19790890 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 441-894 |
| Cow position: | chr26:16510584-16511080 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 348 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 475-860 |
| Cow position: | chr26:11793206-11793585 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 5, 72 |
| Conread position: | 614-838 |
| Cow position: | chr26:9641324-9641561 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 614-886 |
| Cow position: | chr26:29433207-29432916 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 23, 231 |
| Conread position: | 671-863 |
| Cow position: | chr26:2967880-2968078 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 671-865 |
| Cow position: | chr26:11304181-11304375 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 671-891 |
| Cow position: | chr26:4713421-4713201 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 671-891 |
| Cow position: | chr26:29278483-29278261 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 157 |
| Conread position: | 672-975 |
| Cow position: | chr26:14165852-14166147 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 118 |
| Conread position: | 674-890 |
| Cow position: | chr26:26933860-26933640 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 56, 148 |
| Conread position: | 676-890 |
| Cow position: | chr26:6649673-6649465 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 679-894 |
| Cow position: | chr26:15940544-15940330 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 51, 147 |
| Conread position: | 689-865 |
| Cow position: | chr26:4292713-4292534 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 704-890 |
| Cow position: | chr26:35558336-35558143 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 127 |
| Conread position: | 732-865 |
| Cow position: | chr26:24937302-24937166 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 761-886 |
| Cow position: | chr26:5313217-5313347 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 109, 61 |
Show alignments to all cow chromosomes.