Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050B18.3 |
| Conread position: | 345-641 |
| Cow position: | chr27:15200965-15200658 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 126, 57 |
| Conread position: | 351-496 |
| Cow position: | chr27:6641490-6641341 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 358-552 |
| Cow position: | chr27:8048482-8048680 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 112, 66 |
| Conread position: | 358-559 |
| Cow position: | chr27:6523303-6523097 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 109, 62 |
| Conread position: | 363-487 |
| Cow position: | chr27:12112483-12112610 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 104, 69 |
| Conread position: | 365-865 |
| Cow position: | chr27:28685388-28684881 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 5 |
| Conread position: | 372-609 |
| Cow position: | chr27:31216920-31217158 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 98, 52 |
| Conread position: | 373-579 |
| Cow position: | chr27:19577916-19577708 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 375-620 |
| Cow position: | chr27:27632370-27632628 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 6 |
| Conread position: | 377-549 |
| Cow position: | chr27:19661181-19661003 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 378-579 |
| Cow position: | chr27:9159430-9159228 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 380-610 |
| Cow position: | chr27:10284084-10284318 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 390-549 |
| Cow position: | chr27:29019521-29019690 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 392-552 |
| Cow position: | chr27:14902426-14902590 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 31 |
| Conread position: | 400-861 |
| Cow position: | chr27:16099804-16100281 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 404-890 |
| Cow position: | chr27:4962251-4962745 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 346 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 404-890 |
| Cow position: | chr27:17924098-17924601 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 406-556 |
| Cow position: | chr27:7495466-7495308 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 406-558 |
| Cow position: | chr27:3256252-3256097 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 96 |
| Conread position: | 406-885 |
| Cow position: | chr27:12261592-12261118 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 25 |
| Conread position: | 406-890 |
| Cow position: | chr27:6292580-6292105 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 339 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 424-890 |
| Cow position: | chr27:20012418-20012901 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 328 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 450-826 |
| Cow position: | chr27:24743129-24743510 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 480-836 |
| Cow position: | chr27:30149561-30149927 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 47, 121 |
| Conread position: | 521-890 |
| Cow position: | chr27:4295435-4295821 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 553-897 |
| Cow position: | chr27:9918082-9917732 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 601-890 |
| Cow position: | chr27:14867229-14867518 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 613-887 |
| Cow position: | chr27:17442975-17443259 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 25, 90 |
| Conread position: | 617-834 |
| Cow position: | chr27:11376618-11376832 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 671-886 |
| Cow position: | chr27:14910742-14910958 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 156 |
| Conread position: | 671-890 |
| Cow position: | chr27:31262724-31262945 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 62, 113 |
| Conread position: | 676-887 |
| Cow position: | chr27:23955425-23955207 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 136 |
| Conread position: | 676-890 |
| Cow position: | chr27:1088183-1087968 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 133 |
| Conread position: | 677-817 |
| Cow position: | chr27:26016068-26016209 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 88 |
| Conread position: | 695-890 |
| Cow position: | chr27:13635978-13635781 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 35, 133 |
| Conread position: | 713-890 |
| Cow position: | chr27:19960908-19960736 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 766-890 |
| Cow position: | chr27:12440860-12440739 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.