Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B18.3

Conread position: 345-523
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 11, 87

Conread position: 345-556
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 134, 85

Conread position: 345-559
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 123, 60

Conread position: 345-740
Cow position:
Alignm length: 409
Alignm identity: 280
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 15, 91

Conread position: 351-579
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 128, 7

Conread position: 356-542
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 74

Conread position: 356-559
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 111, 74

Conread position: 358-541
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 358-552
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 136, 71

Conread position: 358-579
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 110, 72

Conread position: 358-643
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 72

Conread position: 358-904
Cow position:
Alignm length: 576
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 72

Conread position: 361-604
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 69

Conread position: 366-519
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 63

Conread position: 366-584
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 64

Conread position: 366-634
Cow position:
Alignm length: 279
Alignm identity: 205
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 45, 66

Conread position: 368-549
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 102, 37

Conread position: 370-578
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 59

Conread position: 370-579
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 6

Conread position: 370-890
Cow position:
Alignm length: 547
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 60

Conread position: 371-578
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 38

Conread position: 372-524
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 60

Conread position: 372-542
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 58

Conread position: 372-556
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 169, 57

Conread position: 372-613
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 61

Conread position: 374-541
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 56

Conread position: 374-549
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 58

Conread position: 380-555
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 49

Conread position: 384-541
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 119, 47

Conread position: 387-734
Cow position:
Alignm length: 357
Alignm identity: 229
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 42

Conread position: 389-546
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 137, 42

Conread position: 390-869
Cow position:
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 42

Conread position: 390-870
Cow position:
Alignm length: 519
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 139

Conread position: 391-885
Cow position:
Alignm length: 529
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 40

Conread position: 392-541
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 78, 17

Conread position: 393-865
Cow position:
Alignm length: 500
Alignm identity: 334
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 64, 37

Conread position: 394-579
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 47

Conread position: 394-720
Cow position:
Alignm length: 342
Alignm identity: 223
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 35

Conread position: 394-768
Cow position:
Alignm length: 398
Alignm identity: 254
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 35

Conread position: 394-896
Cow position:
Alignm length: 521
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 194

Conread position: 395-625
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 72, 36

Conread position: 396-709
Cow position:
Alignm length: 321
Alignm identity: 212
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 72, 140

Conread position: 398-595
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 73, 96

Conread position: 398-794
Cow position:
Alignm length: 410
Alignm identity: 273
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 36

Conread position: 399-726
Cow position:
Alignm length: 344
Alignm identity: 232
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 16

Conread position: 400-579
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 166

Conread position: 400-817
Cow position:
Alignm length: 439
Alignm identity: 298
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 30

Conread position: 400-886
Cow position:
Alignm length: 534
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 400-890
Cow position:
Alignm length: 505
Alignm identity: 316
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 31

Conread position: 401-672
Cow position:
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 16

Conread position: 401-890
Cow position:
Alignm length: 511
Alignm identity: 330
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 68

Conread position: 404-548
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 25

Conread position: 404-556
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 27

Conread position: 404-698
Cow position:
Alignm length: 327
Alignm identity: 222
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 97, 81

Conread position: 404-887
Cow position:
Alignm length: 514
Alignm identity: 333
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 67, 25

Conread position: 407-579
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 24

Conread position: 407-763
Cow position:
Alignm length: 368
Alignm identity: 241
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 24

Conread position: 407-887
Cow position:
Alignm length: 494
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 408-887
Cow position:
Alignm length: 497
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 23

Conread position: 408-890
Cow position:
Alignm length: 510
Alignm identity: 334
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 94

Conread position: 422-892
Cow position:
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 99

Conread position: 423-892
Cow position:
Alignm length: 487
Alignm identity: 321
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 8, 57

Conread position: 435-869
Cow position:
Alignm length: 455
Alignm identity: 300
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 93, 43

Conread position: 446-886
Cow position:
Alignm length: 469
Alignm identity: 312
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 57

Conread position: 474-803
Cow position:
Alignm length: 340
Alignm identity: 225
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 10, 75

Conread position: 479-890
Cow position:
Alignm length: 434
Alignm identity: 280
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 111, 53

Conread position: 480-865
Cow position:
Alignm length: 396
Alignm identity: 266
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 158, 16

Conread position: 480-890
Cow position:
Alignm length: 432
Alignm identity: 282
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 86

Conread position: 516-894
Cow position:
Alignm length: 398
Alignm identity: 267
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 12, 38

Conread position: 520-894
Cow position:
Alignm length: 410
Alignm identity: 281
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 24

Conread position: 526-819
Cow position:
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 10

Conread position: 533-860
Cow position:
Alignm length: 340
Alignm identity: 217
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 105, 18

Conread position: 533-893
Cow position:
Alignm length: 397
Alignm identity: 268
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 21

Conread position: 567-869
Cow position:
Alignm length: 318
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 270

Conread position: 578-890
Cow position:
Alignm length: 326
Alignm identity: 225
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 32

Conread position: 584-894
Cow position:
Alignm length: 322
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 146, 134

Conread position: 586-852
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 119

Conread position: 587-885
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 233

Conread position: 593-870
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 22

Conread position: 596-792
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 61

Conread position: 596-907
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 54

Conread position: 601-884
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 87

Conread position: 601-894
Cow position:
Alignm length: 319
Alignm identity: 214
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 150

Conread position: 602-893
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 132

Conread position: 603-889
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 127, 45

Conread position: 606-884
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 228

Conread position: 610-884
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 42

Conread position: 612-890
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 214

Conread position: 616-863
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 22, 190

Conread position: 617-833
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 215

Conread position: 628-890
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 102, 21

Conread position: 670-865
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 671-813
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 108

Conread position: 671-835
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 159

Conread position: 671-875
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 58

Conread position: 671-885
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 94

Conread position: 671-886
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 59, 157

Conread position: 671-886
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 102

Conread position: 671-890
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 131

Conread position: 671-890
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 157

Conread position: 671-891
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 154

Conread position: 673-865
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 60, 48

Conread position: 674-869
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 159

Conread position: 675-890
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 87, 53

Conread position: 677-865
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 680-869
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 48, 130

Conread position: 680-894
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 137

Conread position: 688-890
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 54

Conread position: 691-890
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 135

Conread position: 704-887
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 126

Conread position: 705-887
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 123

Conread position: 713-890
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 113

Conread position: 720-890
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 8

Conread position: 735-894
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 92

Conread position: 756-862
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 69

Conread position: 767-890
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.