Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B18.3

Conread position: 345-553
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 123, 45

Conread position: 345-556
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 196, 134

Conread position: 345-560
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 122, 57

Conread position: 345-579
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 150, 85

Conread position: 345-585
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 122, 54

Conread position: 345-607
Cow position:
Alignm length: 276
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 88

Conread position: 351-552
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 41

Conread position: 351-607
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 150, 5

Conread position: 352-579
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 5, 78

Conread position: 356-762
Cow position:
Alignm length: 417
Alignm identity: 260
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 77

Conread position: 357-574
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 160, 74

Conread position: 358-466
Cow position:
Alignm length: 109
Alignm identity: 93
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 358-488
Cow position:
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 112, 72

Conread position: 358-574
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 135, 72

Conread position: 362-632
Cow position:
Alignm length: 283
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 62

Conread position: 364-512
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 130, 66

Conread position: 364-547
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 126, 66

Conread position: 364-570
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 66

Conread position: 365-889
Cow position:
Alignm length: 556
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 187

Conread position: 366-550
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 113, 26

Conread position: 366-585
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 64

Conread position: 368-552
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 102, 83

Conread position: 370-541
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 60

Conread position: 371-550
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 104, 59

Conread position: 372-531
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 98, 33

Conread position: 372-552
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 57

Conread position: 372-561
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 58

Conread position: 372-579
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 48

Conread position: 372-579
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 129, 58

Conread position: 374-549
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 127, 54

Conread position: 374-557
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 30

Conread position: 374-894
Cow position:
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 56

Conread position: 378-552
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 52

Conread position: 378-561
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 42

Conread position: 378-644
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 195

Conread position: 380-552
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 121

Conread position: 381-542
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 138, 48

Conread position: 383-586
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 27

Conread position: 384-629
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 47

Conread position: 390-541
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 390-555
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 39

Conread position: 390-633
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 33

Conread position: 390-638
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 111, 39

Conread position: 392-555
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 39

Conread position: 396-559
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 132, 38

Conread position: 398-894
Cow position:
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 33

Conread position: 399-586
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 162

Conread position: 400-628
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 29

Conread position: 400-729
Cow position:
Alignm length: 346
Alignm identity: 231
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 36

Conread position: 400-869
Cow position:
Alignm length: 485
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 34

Conread position: 400-887
Cow position:
Alignm length: 509
Alignm identity: 335
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 59, 31

Conread position: 400-890
Cow position:
Alignm length: 514
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 400-890
Cow position:
Alignm length: 520
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 31

Conread position: 400-894
Cow position:
Alignm length: 519
Alignm identity: 361
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 33

Conread position: 400-904
Cow position:
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 38

Conread position: 404-555
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 25

Conread position: 404-559
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 27

Conread position: 404-579
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 27

Conread position: 404-787
Cow position:
Alignm length: 401
Alignm identity: 264
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 27

Conread position: 408-549
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 23

Conread position: 409-559
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 22

Conread position: 409-633
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 14

Conread position: 420-890
Cow position:
Alignm length: 510
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 11

Conread position: 430-890
Cow position:
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 297

Conread position: 432-842
Cow position:
Alignm length: 428
Alignm identity: 282
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 72

Conread position: 434-795
Cow position:
Alignm length: 390
Alignm identity: 260
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 170

Conread position: 434-891
Cow position:
Alignm length: 475
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 97

Conread position: 453-890
Cow position:
Alignm length: 453
Alignm identity: 307
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 83

Conread position: 496-894
Cow position:
Alignm length: 423
Alignm identity: 293
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 7, 51

Conread position: 521-890
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 78, 29

Conread position: 525-885
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 24, 327

Conread position: 527-932
Cow position:
Alignm length: 426
Alignm identity: 292
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 23, 115

Conread position: 536-887
Cow position:
Alignm length: 379
Alignm identity: 260
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 31

Conread position: 541-887
Cow position:
Alignm length: 360
Alignm identity: 246
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 24

Conread position: 543-894
Cow position:
Alignm length: 378
Alignm identity: 256
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 212

Conread position: 554-886
Cow position:
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 280

Conread position: 590-885
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 16

Conread position: 596-944
Cow position:
Alignm length: 364
Alignm identity: 244
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 6, 15

Conread position: 598-909
Cow position:
Alignm length: 335
Alignm identity: 230
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 224

Conread position: 601-890
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 97

Conread position: 602-886
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 136

Conread position: 613-819
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 87

Conread position: 668-890
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 41

Conread position: 670-834
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 671-882
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 77

Conread position: 671-892
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 25

Conread position: 671-894
Cow position:
Alignm length: 229
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 156

Conread position: 671-894
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 42

Conread position: 671-969
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 57, 86

Conread position: 672-896
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 123

Conread position: 673-884
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 95, 34

Conread position: 673-886
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 34

Conread position: 674-826
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 674-864
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 12

Conread position: 674-890
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 56, 109

Conread position: 678-894
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 151

Conread position: 679-869
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 51, 34

Conread position: 688-887
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 143

Conread position: 696-864
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 135

Conread position: 697-920
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 132

Conread position: 701-890
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 125

Conread position: 713-896
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 52

Show alignments to all cow chromosomes.