Cow genome map

Conread name: Ss1.1-Pig4-TMW8050B18.3

Conread position: 339-579
Cow position: chr8:10263473-10263233 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 105

Conread position: 345-552
Cow position: chr8:44437464-44437671 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 166

Conread position: 345-636
Cow position: chr8:23160649-23160956 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 84

Conread position: 345-890
Cow position: chr8:26877146-26877706 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 366
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 87

Conread position: 348-550
Cow position: chr8:44664884-44664672 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 7

Conread position: 350-549
Cow position: chr8:41905901-41905706 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 352-760
Cow position: chr8:36686687-36687109 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 275
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 5

Conread position: 356-542
Cow position: chr8:38042696-38042514 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 358-560
Cow position: chr8:25677345-25677151 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 84

Conread position: 364-550
Cow position: chr8:39039745-39039935 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 115, 56

Conread position: 366-477
Cow position: chr8:55323398-55323508 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 366-555
Cow position: chr8:47136293-47136098 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 113, 64

Conread position: 366-894
Cow position: chr8:24889974-24890503 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 370
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 160, 62

Conread position: 368-542
Cow position: chr8:32491278-32491452 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 62

Conread position: 368-763
Cow position: chr8:20672398-20672006 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 112, 61

Conread position: 370-541
Cow position: chr8:24868024-24867846 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 61

Conread position: 370-549
Cow position: chr8:41914789-41914614 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 372-579
Cow position: chr8:7149962-7149761 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 151, 59

Conread position: 373-625
Cow position: chr8:51303411-51303667 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 90, 56

Conread position: 374-645
Cow position: chr8:38261853-38261569 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 91, 54

Conread position: 376-837
Cow position: chr8:1386034-1386490 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 55

Conread position: 380-530
Cow position: chr8:34663581-34663734 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 91, 51

Conread position: 380-644
Cow position: chr8:31637567-31637833 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 50

Conread position: 380-761
Cow position: chr8:38986905-38987296 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 264
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 91, 24

Conread position: 380-887
Cow position: chr8:31289230-31288701 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 366
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 87, 53

Conread position: 383-544
Cow position: chr8:47678257-47678425 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 47

Conread position: 384-647
Cow position: chr8:20926271-20926012 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 51

Conread position: 384-852
Cow position: chr8:42151944-42151461 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 318
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 158

Conread position: 386-579
Cow position: chr8:49687486-49687286 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 44

Conread position: 386-613
Cow position: chr8:55925936-55926180 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 45

Conread position: 388-554
Cow position: chr8:4940569-4940401 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 113, 41

Conread position: 390-885
Cow position: chr8:26398112-26397580 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 374
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 77, 20

Conread position: 390-890
Cow position: chr8:16648641-16648140 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 50

Conread position: 390-890
Cow position: chr8:43974930-43974463 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 41

Conread position: 391-564
Cow position: chr8:20339028-20339203 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 39

Conread position: 391-579
Cow position: chr8:45245271-45245084 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 137, 24

Conread position: 391-604
Cow position: chr8:10337285-10337066 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 42

Conread position: 391-612
Cow position: chr8:47469727-47469964 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 40

Conread position: 392-549
Cow position: chr8:48513263-48513109 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 104, 39

Conread position: 392-579
Cow position: chr8:38358169-38358362 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 39

Conread position: 393-579
Cow position: chr8:39630515-39630707 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 86, 38

Conread position: 393-593
Cow position: chr8:72825-72624 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 36

Conread position: 393-616
Cow position: chr8:57404077-57404305 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 38

Conread position: 396-658
Cow position: chr8:6746402-6746122 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 35

Conread position: 396-862
Cow position: chr8:55091679-55092156 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 310
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 34

Conread position: 396-869
Cow position: chr8:21115614-21115125 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 318
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 72, 38

Conread position: 397-578
Cow position: chr8:8134759-8134570 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 73, 34

Conread position: 398-886
Cow position: chr8:59061421-59061927 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 343
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 69, 31

Conread position: 400-614
Cow position: chr8:50412374-50412156 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 71, 30

Conread position: 400-629
Cow position: chr8:29262534-29262776 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 67

Conread position: 400-706
Cow position: chr8:22103430-22103105 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 31

Conread position: 400-786
Cow position: chr8:3645390-3644983 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 268
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 143

Conread position: 400-862
Cow position: chr8:46451991-46451530 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 325
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 29

Conread position: 400-865
Cow position: chr8:18791626-18791176 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 302
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 31

Conread position: 400-865
Cow position: chr8:46714610-46714144 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 337
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 148, 31

Conread position: 401-887
Cow position: chr8:11057905-11058413 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 359
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 29

Conread position: 402-629
Cow position: chr8:21948076-21947845 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 29

Conread position: 404-577
Cow position: chr8:25349464-25349643 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 27

Conread position: 404-873
Cow position: chr8:58291625-58291146 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 323
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 36

Conread position: 406-610
Cow position: chr8:40030704-40030497 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 23

Conread position: 406-826
Cow position: chr8:31954407-31954827 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 65, 25

Conread position: 408-703
Cow position: chr8:41951378-41951687 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 72

Conread position: 408-817
Cow position: chr8:11377977-11378392 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 286
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 25

Conread position: 409-881
Cow position: chr8:7415031-7415487 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 319
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 71, 21

Conread position: 412-799
Cow position: chr8:9649636-9649240 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 17

Conread position: 417-605
Cow position: chr8:42315262-42315073 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 14

Conread position: 426-900
Cow position: chr8:4999108-4999602 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 312
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 73

Conread position: 479-851
Cow position: chr8:8724281-8723904 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 243
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 69

Conread position: 479-864
Cow position: chr8:41411372-41411765 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 17

Conread position: 484-886
Cow position: chr8:23849665-23850101 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 304
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 43, 10

Conread position: 557-851
Cow position: chr8:36608829-36608518 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 167

Conread position: 574-890
Cow position: chr8:59727832-59728151 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 586-864
Cow position: chr8:8278245-8277959 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 190

Conread position: 588-890
Cow position: chr8:26928976-26928674 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 5

Conread position: 593-890
Cow position: chr8:21945687-21945994 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 219

Conread position: 596-816
Cow position: chr8:19128250-19128028 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 64

Conread position: 602-890
Cow position: chr8:21585840-21586129 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 50

Conread position: 609-843
Cow position: chr8:25676830-25676587 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 41

Conread position: 609-890
Cow position: chr8:49393051-49392772 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 174

Conread position: 614-889
Cow position: chr8:17128893-17128607 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 35

Conread position: 657-894
Cow position: chr8:53106515-53106287 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 35

Conread position: 670-865
Cow position: chr8:58424891-58425074 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 105, 58

Conread position: 671-839
Cow position: chr8:26867663-26867835 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 156

Conread position: 671-865
Cow position: chr8:5185873-5186066 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 25

Conread position: 671-871
Cow position: chr8:25050073-25050280 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 0

Conread position: 671-890
Cow position: chr8:31495162-31495380 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 38

Conread position: 671-890
Cow position: chr8:43399040-43398824 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 59, 155

Conread position: 671-894
Cow position: chr8:51919867-51919634 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 156

Conread position: 673-826
Cow position: chr8:21130194-21130355 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 674-908
Cow position: chr8:28382993-28383220 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 231, 148

Conread position: 685-865
Cow position: chr8:26158489-26158669 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 29

Conread position: 693-896
Cow position: chr8:26195074-26194867 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 74

Conread position: 695-880
Cow position: chr8:44127893-44127702 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 33

Conread position: 696-861
Cow position: chr8:61465668-61465830 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 33

Conread position: 700-893
Cow position: chr8:34396069-34396257 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 33

Conread position: 706-885
Cow position: chr8:53887052-53887230 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 119

Conread position: 718-884
Cow position: chr8:38234045-38233871 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 119

Conread position: 728-865
Cow position: chr8:32828854-32828995 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 97

Conread position: 729-890
Cow position: chr8:29559638-29559800 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 122

Conread position: 759-890
Cow position: chr8:24351585-24351459 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.