Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8050B18.3
        

               Conread position:
               339-579
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               345-552
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               125, 166
               

               Conread position:
               345-636
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               345-890
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               366
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               348-550
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 7
               

               Conread position:
               350-549
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               352-760
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 5
               

               Conread position:
               356-542
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               358-560
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 84
               

               Conread position:
               364-550
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               115, 56
               

               Conread position:
               366-477
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               366-555
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               113, 64
               

               Conread position:
               366-894
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               370
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               160, 62
               

               Conread position:
               368-542
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               102, 62
               

               Conread position:
               368-763
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               112, 61
               

               Conread position:
               370-541
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               370-549
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               372-579
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               151, 59
               

               Conread position:
               373-625
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               90, 56
               

               Conread position:
               374-645
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               91, 54
               

               Conread position:
               376-837
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 55
               

               Conread position:
               380-530
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               91, 51
               

               Conread position:
               380-644
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               91, 50
               

               Conread position:
               380-761
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               380-887
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               366
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               87, 53
               

               Conread position:
               383-544
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 47
               

               Conread position:
               384-647
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               6, 51
               

               Conread position:
               384-852
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 158
               

               Conread position:
               386-579
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               386-613
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               388-554
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               113, 41
               

               Conread position:
               390-885
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               374
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               390-890
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 50
               

               Conread position:
               390-890
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               391-564
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               88, 39
               

               Conread position:
               391-579
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               137, 24
               

               Conread position:
               391-604
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               89, 42
               

               Conread position:
               391-612
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 40
               

               Conread position:
               392-549
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               104, 39
               

               Conread position:
               392-579
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               78, 39
               

               Conread position:
               393-579
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               393-593
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               74, 36
               

               Conread position:
               393-616
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               396-658
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 35
               

               Conread position:
               396-862
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               396-869
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               72, 38
               

               Conread position:
               397-578
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               398-886
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               343
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               69, 31
               

               Conread position:
               400-614
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               400-629
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 67
               

               Conread position:
               400-706
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               400-786
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 143
               

               Conread position:
               400-862
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 29
               

               Conread position:
               400-865
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               400-865
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               337
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               148, 31
               

               Conread position:
               401-887
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               359
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               402-629
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               404-577
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               404-873
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               323
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               69, 36
               

               Conread position:
               406-610
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 23
               

               Conread position:
               406-826
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               304
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               408-703
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               5, 72
               

               Conread position:
               408-817
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               409-881
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               412-799
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               59, 17
               

               Conread position:
               417-605
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               426-900
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 73
               

               Conread position:
               479-851
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               479-864
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               484-886
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               304
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               557-851
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 167
               

               Conread position:
               574-890
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               586-864
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 190
               

               Conread position:
               588-890
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               64, 5
               

               Conread position:
               593-890
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               9, 219
               

               Conread position:
               596-816
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               602-890
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 50
               

               Conread position:
               609-843
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               609-890
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               29, 174
               

               Conread position:
               614-889
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               657-894
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               670-865
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               671-839
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               59, 156
               

               Conread position:
               671-865
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               671-871
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               671-890
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               671-890
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               59, 155
               

               Conread position:
               671-894
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               59, 156
               

               Conread position:
               673-826
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               674-908
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               231, 148
               

               Conread position:
               685-865
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               693-896
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               695-880
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 33
               

               Conread position:
               696-861
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               5, 33
               

               Conread position:
               700-893
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               706-885
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 119
               

               Conread position:
               718-884
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 119
               

               Conread position:
               728-865
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 97
               

               Conread position:
               729-890
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               759-890
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.