Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050B18.3 |
| Conread position: | 342-559 |
| Cow position: | chrX:2147043-2147267 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 343-512 |
| Cow position: | chrX:1105091-1104921 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 136, 14 |
| Conread position: | 345-545 |
| Cow position: | chrX:38549160-38549368 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 345-548 |
| Cow position: | chrX:7425177-7425388 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 73, 87 |
| Conread position: | 345-552 |
| Cow position: | chrX:16416221-16416433 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 134, 85 |
| Conread position: | 348-552 |
| Cow position: | chrX:29032132-29032330 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 348-595 |
| Cow position: | chrX:20129257-20129012 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 348-756 |
| Cow position: | chrX:42530735-42530364 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 296 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 119, 82 |
| Conread position: | 352-517 |
| Cow position: | chrX:33519338-33519505 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 127, 5 |
| Conread position: | 356-550 |
| Cow position: | chrX:18989387-18989587 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 356-554 |
| Cow position: | chrX:21672275-21672479 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 356-556 |
| Cow position: | chrX:27394294-27394092 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 358-539 |
| Cow position: | chrX:20167930-20168117 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 112, 72 |
| Conread position: | 358-605 |
| Cow position: | chrX:6203281-6203533 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 116, 72 |
| Conread position: | 358-764 |
| Cow position: | chrX:37138248-37137816 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 132, 73 |
| Conread position: | 359-466 |
| Cow position: | chrX:48578142-48578248 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 360-539 |
| Cow position: | chrX:22624209-22624394 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 110, 70 |
| Conread position: | 361-559 |
| Cow position: | chrX:21815990-21816185 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 361-595 |
| Cow position: | chrX:17933730-17933489 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 109, 9 |
| Conread position: | 364-558 |
| Cow position: | chrX:8519243-8519436 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 99, 66 |
| Conread position: | 366-556 |
| Cow position: | chrX:21004418-21004611 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 107, 49 |
| Conread position: | 366-824 |
| Cow position: | chrX:4554134-4554604 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 28 |
| Conread position: | 367-466 |
| Cow position: | chrX:42757414-42757513 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-887 |
| Cow position: | chrX:19210661-19210132 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 368-526 |
| Cow position: | chrX:47243543-47243381 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 62 |
| Conread position: | 368-886 |
| Cow position: | chrX:6277696-6277182 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 61 |
| Conread position: | 370-545 |
| Cow position: | chrX:34543525-34543702 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 107, 60 |
| Conread position: | 370-554 |
| Cow position: | chrX:7513254-7513437 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 124, 60 |
| Conread position: | 370-556 |
| Cow position: | chrX:23514280-23514087 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 370-559 |
| Cow position: | chrX:46044782-46044975 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 54 |
| Conread position: | 370-579 |
| Cow position: | chrX:16284209-16283996 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 370-642 |
| Cow position: | chrX:37906701-37906978 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 102, 195 |
| Conread position: | 374-556 |
| Cow position: | chrX:2206802-2206622 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 127, 56 |
| Conread position: | 374-557 |
| Cow position: | chrX:41884676-41884485 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 91, 56 |
| Conread position: | 374-559 |
| Cow position: | chrX:1514662-1514478 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 374-595 |
| Cow position: | chrX:40692996-40692774 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 375-586 |
| Cow position: | chrX:33631919-33632138 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 96, 59 |
| Conread position: | 376-555 |
| Cow position: | chrX:23970133-23970311 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 376-556 |
| Cow position: | chrX:39558605-39558422 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 376-576 |
| Cow position: | chrX:2029134-2029340 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 53 |
| Conread position: | 376-604 |
| Cow position: | chrX:6639868-6640097 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 147, 194 |
| Conread position: | 378-892 |
| Cow position: | chrX:13852226-13852745 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 354 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 379-545 |
| Cow position: | chrX:41403722-41403892 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 379-545 |
| Cow position: | chrX:41410270-41410440 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 379-563 |
| Cow position: | chrX:9538306-9538495 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 380-560 |
| Cow position: | chrX:19228310-19228133 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 380-561 |
| Cow position: | chrX:47249040-47248851 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 380-593 |
| Cow position: | chrX:16732987-16732765 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 382-550 |
| Cow position: | chrX:6607171-6607345 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 46 |
| Conread position: | 382-566 |
| Cow position: | chrX:26625927-26625733 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 382-570 |
| Cow position: | chrX:8558713-8558519 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 384-550 |
| Cow position: | chrX:619256-619082 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 95, 46 |
| Conread position: | 384-574 |
| Cow position: | chrX:31745295-31745098 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 384-583 |
| Cow position: | chrX:13058332-13058538 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 386-739 |
| Cow position: | chrX:31571149-31571510 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 164, 44 |
| Conread position: | 388-554 |
| Cow position: | chrX:25419405-25419235 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 388-570 |
| Cow position: | chrX:12249561-12249741 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 82, 136 |
| Conread position: | 389-544 |
| Cow position: | chrX:38840645-38840804 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 390-593 |
| Cow position: | chrX:10373065-10373292 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 392-579 |
| Cow position: | chrX:1616291-1616095 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 392-629 |
| Cow position: | chrX:678808-678561 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 392-633 |
| Cow position: | chrX:20653155-20653400 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 129 |
| Conread position: | 392-724 |
| Cow position: | chrX:25281708-25281352 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 393-790 |
| Cow position: | chrX:38140276-38139868 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 78, 205 |
| Conread position: | 395-887 |
| Cow position: | chrX:37067096-37067631 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 167 |
| Conread position: | 396-607 |
| Cow position: | chrX:31473286-31473500 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 140 |
| Conread position: | 396-863 |
| Cow position: | chrX:4794408-4793935 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 397-700 |
| Cow position: | chrX:29925813-29925516 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 164, 32 |
| Conread position: | 397-887 |
| Cow position: | chrX:4629926-4629407 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 417 |
| Conread position: | 398-531 |
| Cow position: | chrX:20511258-20511394 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 398-558 |
| Cow position: | chrX:38094759-38094594 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 78, 31 |
| Conread position: | 398-560 |
| Cow position: | chrX:39347020-39346851 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 398-645 |
| Cow position: | chrX:7692697-7692449 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 398-865 |
| Cow position: | chrX:25848685-25849176 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 398-885 |
| Cow position: | chrX:40142431-40141953 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 400-725 |
| Cow position: | chrX:18990031-18989697 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 400-738 |
| Cow position: | chrX:6659141-6659490 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 400-842 |
| Cow position: | chrX:24169547-24169091 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 401-869 |
| Cow position: | chrX:10462406-10462888 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 401-877 |
| Cow position: | chrX:24193878-24194368 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 101 |
| Conread position: | 404-579 |
| Cow position: | chrX:42247412-42247237 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 404-885 |
| Cow position: | chrX:31058920-31059388 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 337 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 404-890 |
| Cow position: | chrX:46372971-46372470 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 405-560 |
| Cow position: | chrX:13245364-13245526 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 405-890 |
| Cow position: | chrX:20716135-20715647 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 407-706 |
| Cow position: | chrX:7362078-7361758 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 408-862 |
| Cow position: | chrX:25163594-25164047 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 415-886 |
| Cow position: | chrX:25404554-25404071 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 185 |
| Conread position: | 424-863 |
| Cow position: | chrX:31385983-31386445 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 321 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 130, 24 |
| Conread position: | 431-869 |
| Cow position: | chrX:35695072-35695522 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 475-890 |
| Cow position: | chrX:17265231-17264825 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 5, 49 |
| Conread position: | 479-876 |
| Cow position: | chrX:6380686-6381083 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 479-890 |
| Cow position: | chrX:17200580-17200988 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 556-864 |
| Cow position: | chrX:42218798-42219115 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 143 |
| Conread position: | 570-852 |
| Cow position: | chrX:25824351-25824049 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 27, 274 |
| Conread position: | 590-890 |
| Cow position: | chrX:4424942-4425250 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 599-887 |
| Cow position: | chrX:37139590-37139885 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 38, 106 |
| Conread position: | 603-1023 |
| Cow position: | chrX:32049261-32049691 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 136 |
| Conread position: | 608-843 |
| Cow position: | chrX:28016891-28017112 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 615-886 |
| Cow position: | chrX:20128886-20128610 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 618-885 |
| Cow position: | chrX:263821-263543 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 218 |
| Conread position: | 619-890 |
| Cow position: | chrX:2650106-2649835 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 671-864 |
| Cow position: | chrX:34134235-34134426 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 16 |
| Conread position: | 671-886 |
| Cow position: | chrX:21989882-21990086 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 671-888 |
| Cow position: | chrX:21206075-21205861 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 671-890 |
| Cow position: | chrX:25707770-25707558 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 671-890 |
| Cow position: | chrX:36044352-36044139 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 675-894 |
| Cow position: | chrX:34424227-34424450 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 676-887 |
| Cow position: | chrX:47314509-47314723 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 10, 155 |
| Conread position: | 681-865 |
| Cow position: | chrX:38693623-38693808 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 681-890 |
| Cow position: | chrX:15844161-15843948 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 197 |
| Conread position: | 705-890 |
| Cow position: | chrX:19093948-19093764 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 716-894 |
| Cow position: | chrX:40334005-40333820 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 747-894 |
| Cow position: | chrX:32011468-32011311 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 12, 84 |
| Conread position: | 766-890 |
| Cow position: | chrX:36029091-36029211 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.