Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8050F16.5.5
        

               Conread position:
               1-209
               

               Cow position:
               chr19:13384135-13383927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               209-291
               

               Cow position:
               chr19:13382595-13382513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-389
               

               Cow position:
               chr19:13381674-13381574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               369-486
               

               Cow position:
               chr19:13380935-13380817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               487-564
               

               Cow position:
               chr19:13380647-13380570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               78
               

               Alignm identity:
               73
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-680
               

               Cow position:
               chr19:13380343-13380221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               669-808
               

               Cow position:
               chr19:13379805-13379666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               135
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               834-961
               

               Cow position:
               chr19:13378628-13378501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               125
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               960-1041
               

               Cow position:
               chr19:13377589-13377508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1040-1502
               

               Cow position:
               chr19:13376782-13376329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 148
               
Show alignments to all cow chromosomes.