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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8050K11.5
        

               
Conread position:
               
1-119
               

               
Cow position:
               
chr11:80591609-80591727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr11:50198443-50198322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr11:75354455-75354579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr11:77237095-77237219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr11:1492619-1492494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr11:40290075-40289948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr11:74389447-74389574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr11:41093613-41093486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr11:79868857-79868986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr11:21620673-21620807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr11:47757732-47757595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr11:62880375-62880511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr11:18116605-18116744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr11:16229395-16229262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr11:19507583-19507723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 129
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr11:67453905-67454047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr11:37753075-37752927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr11:2285965-2286116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr11:63507760-63507904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr11:42292530-42292375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr11:44233661-44233816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr11:4266903-4266747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr11:12895997-12896159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr11:57753971-57753815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr11:65282262-65282418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr11:10876520-10876676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr11:38578496-38578339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr11:5766294-5766135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr11:8246436-8246595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr11:18328415-18328256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr11:26550728-26550887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr11:38641189-38641348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr11:45155491-45155335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr11:5657303-5657141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr11:861674-861841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr11:36765746-36765910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr11:75558743-75558572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr11:86721226-86721058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr11:26482827-26482997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr11:31834009-31833836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr11:34409789-34409958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr11:42793685-42793512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr11:4053111-4052946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr11:13224467-13224641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr11:17980713-17980887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr11:38811017-38810845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr11:44870771-44870945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr11:19238867-19238699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr11:30255690-30255866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr11:67246115-67246289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr11:4625517-4625340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr11:14469753-14469929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr11:15836165-15836341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr11:31865901-31866077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr11:56916471-56916293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:4032234-4032055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:6153721-6153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:46246741-46246920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:60778032-60777853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:61426960-61427133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:66858732-66858556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr11:77745954-77745781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 119
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:1625914-1625734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:3999260-3999087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
140, 15
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:36230129-36229949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:40402531-40402351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:44488252-44488432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:47124576-47124755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:59942642-59942821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:80520078-80520257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:378569-378388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:1268253-1268072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:1473637-1473458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 145
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:2345692-2345511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:2350771-2350951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:2421719-2421900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:2534941-2535122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:2772590-2772769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:2801007-2800827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:3238554-3238735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:4596819-4597000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:4734535-4734716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:5229778-5229597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:5584195-5584012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:6343711-6343892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:7120697-7120517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:7152248-7152429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:7719263-7719077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:8020601-8020782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:8366812-8366993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:8443739-8443558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:9432627-9432807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:10043496-10043677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:10698494-10698316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 144
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:10810769-10810588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:10871573-10871392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:10949169-10948988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:11315577-11315396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:12178340-12178521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:13015571-13015394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:13087415-13087234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:14426355-14426174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:15047709-15047890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:15495640-15495820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:15988549-15988729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:16547698-16547517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:17078217-17078398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:17104454-17104273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:17549410-17549591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:18372206-18372025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:18587444-18587263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:19997481-19997300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:20285366-20285185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:20428514-20428695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:20730971-20730790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:22617694-22617513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:23773510-23773687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:23904530-23904711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:24333741-24333560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:24397146-24396964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:26254049-26254230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:26592525-26592345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:27724649-27724475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:27943865-27944046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:28125765-28125946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:28226526-28226345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:28619872-28620053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:29999913-30000094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:30088128-30088309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:30200117-30199936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:30777215-30777396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:30929634-30929815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:32455306-32455486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 174
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:33001123-33001305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:34638252-34638071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:34962280-34962457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:35142083-35141903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:36167506-36167325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:36930282-36930102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:38097488-38097309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:38504979-38504798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:38574233-38574052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:38599462-38599281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:38648886-38649068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:38819246-38819065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:40139324-40139142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:41025068-41025249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:41162066-41162247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:41260677-41260496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:41261420-41261601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:41314547-41314728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:44043484-44043657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:44106931-44107110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:44356635-44356455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:44579982-44579801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:44893627-44893446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:46142737-46142556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:47573284-47573103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:47676477-47676658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:47846242-47846423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:48109008-48109189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:48428392-48428572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:50282158-50281973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:51034528-51034709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:52424380-52424561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:52450797-52450616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:52846727-52846908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:54302789-54302970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:54304155-54304336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:56826853-56827034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:57594839-57594658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:57624774-57624593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:57760103-57760284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:58136968-58137144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:58380797-58380977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:61397369-61397188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:61431485-61431304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:61876069-61876250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:62792146-62792324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 110
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:63260960-63260779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:63390230-63390049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:63860392-63860211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:64053073-64052892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:65347076-65346898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:65670593-65670775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:65760355-65760174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:66389763-66389582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:66664168-66663987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:67920090-67919909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:70399140-70399315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:70978140-70977959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:71271784-71271605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:71957627-71957446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:72050230-72050413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:73465962-73465781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:75256442-75256623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:75711001-75710820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:81576435-81576254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:83001280-83001461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:84184033-84184214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:84967360-84967541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:87147965-87147784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr11:49935496-49935314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:456838-456656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:3393907-3393721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:5273322-5273137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:8713570-8713756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:10302901-10302716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:10851366-10851552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:10875023-10875209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:11534806-11534624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:12353640-12353454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:13043622-13043436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:14259714-14259527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 168
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:15372940-15373126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:15640795-15640981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:15695513-15695325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:16757845-16757659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:16795842-16795659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:17781791-17781606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:17890417-17890234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:18389567-18389383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:18920346-18920161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:19099236-19099050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:19592964-19592785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:20601563-20601751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:21631410-21631596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:21820153-21819967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:22103068-22103251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:22593164-22593346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:23138768-23138584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:26146026-26145840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:26328175-26327987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 169
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:27660490-27660675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:27923086-27923274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:29614602-29614784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:31236151-31235967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:31310336-31310147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:31836436-31836621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:32956586-32956398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:32977776-32977588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:33601387-33601201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:34841896-34841710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:38220010-38220197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 162
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:40133548-40133363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:40458430-40458611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:41167442-41167256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:41577704-41577517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:42358432-42358619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 160
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:42373054-42373231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:43361487-43361301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:44031304-44031488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:44255323-44255509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:44914636-44914446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 162
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:44915434-44915249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 117
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:48484826-48484640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:49099401-49099213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:49171252-49171067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:50950220-50950406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:51028667-51028853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:52127738-52127552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:52297909-52297724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:52463754-52463938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:53150768-53150582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:56463614-56463799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:56752075-56751891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:58139942-58140128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:59872060-59872243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:62238788-62238974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:64029936-64029747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:67295755-67295571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:67863011-67862826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:70424638-70424828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:70602031-70601846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:71332751-71332937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:72313843-72314029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:73513117-73512933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:74564560-74564376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 110
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:75195892-75195706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:75510948-75510764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:78819407-78819592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:79995499-79995317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:84774415-84774600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:85390610-85390427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:87154652-87154463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr11:28394321-28394503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr11:4024106-4023916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:2309178-2309363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:21471876-21472065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr11:27934941-27934750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr11:46780818-46780626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr11:14683465-14683654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr11:5482194-5481997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr11:9388588-9388783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr11:12316810-12316613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr11:23495004-23495201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 167
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr11:44153831-44153634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr11:53772916-53773115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr11:38235517-38235323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
2-114
               

               
Cow position:
               
chr11:35241630-35241517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-150
               

               
Cow position:
               
chr11:48271517-48271663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
2-152
               

               
Cow position:
               
chr11:45280718-45280567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr11:33687235-33687077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr11:82345901-82345742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr11:41178205-41178373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr11:64904354-64904522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:10100301-10100479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr11:76767663-76767841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr11:9654241-9654063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
145, 154
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr11:83322910-83323084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:2293807-2293627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:9153004-9152827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 160
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:17854347-17854527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:21852991-21852811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:25759995-25760177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:27938845-27939025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:35541817-35541644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:39587199-39587380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:43644806-43644626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:47595619-47595797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:48884953-48885133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:58049395-58049215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:62009548-62009368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr11:73137831-73138011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:11991252-11991436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:13061909-13061724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:17037281-17037095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:25336390-25336571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:27906577-27906759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:37346178-37346361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:39151849-39152027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:48658984-48659168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:51477879-51478064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:62225303-62225480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:67599835-67600021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:68130642-68130824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:69402968-69402785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr11:71078678-71078860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr11:5222267-5222077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 167
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr11:42231901-42232090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr11:7681210-7681403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr11:37304437-37304629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
3-153
               

               
Cow position:
               
chr11:60515659-60515508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr11:75402271-75402097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 125
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr11:19113028-19112852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr11:38842874-38843048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr11:63652392-63652216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr11:49632160-49631981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
10, 109
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr11:37159807-37159991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr11:40300513-40300332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
10, 125
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr11:45647529-45647349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
4-136
               

               
Cow position:
               
chr11:25808428-25808295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-141
               

               
Cow position:
               
chr11:74929063-74929199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr11:77705075-77705252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr11:11592237-11592419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
143, 157
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr11:41599438-41599251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr11:37068989-37068801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr11:17279344-17279148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr11:55014693-55014523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr11:37278882-37278703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr11:14649985-14649809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
11, 172
               

               
Conread position:
               
6-180
               

               
Cow position:
               
chr11:72369308-72369484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
7-185
               

               
Cow position:
               
chr11:77767298-77767119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 76
               

               
Conread position:
               
8-180
               

               
Cow position:
               
chr11:24601264-24601437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
8-180
               

               
Cow position:
               
chr11:40404869-40404695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
8-189
               

               
Cow position:
               
chr11:58399578-58399761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr11:3915719-3915544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
9-185
               

               
Cow position:
               
chr11:72005543-72005721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 100
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr11:52515777-52515925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr11:33147184-33147013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr11:40375639-40375468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
137, 151
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr11:72291055-72291224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
10-194
               

               
Cow position:
               
chr11:46691000-46691185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
12-124
               

               
Cow position:
               
chr11:18912292-18912404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr11:25565011-25565180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr11:29662799-29662628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr11:68136457-68136626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr11:73798441-73798273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
135, 84
               

               
Conread position:
               
13-185
               

               
Cow position:
               
chr11:44877743-44877915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
134, 61
               

               
Conread position:
               
14-185
               

               
Cow position:
               
chr11:259867-259693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
14-185
               

               
Cow position:
               
chr11:10128677-10128505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 7
               

               
Conread position:
               
14-185
               

               
Cow position:
               
chr11:10622118-10621953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 47
               

               
Conread position:
               
14-185
               

               
Cow position:
               
chr11:26399663-26399487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
15-176
               

               
Cow position:
               
chr11:49411309-49411152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
15-179
               

               
Cow position:
               
chr11:5710153-5710321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
15-185
               

               
Cow position:
               
chr11:2337409-2337580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
15-185
               

               
Cow position:
               
chr11:20760835-20761004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
16-124
               

               
Cow position:
               
chr11:80827054-80826946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-131
               

               
Cow position:
               
chr11:56651961-56651846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-178
               

               
Cow position:
               
chr11:15279556-15279393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
16-180
               

               
Cow position:
               
chr11:10365114-10364952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
16-180
               

               
Cow position:
               
chr11:37285370-37285212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
131, 107
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr11:65430113-65430283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr11:67951627-67951460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 108
               

               
Conread position:
               
17-123
               

               
Cow position:
               
chr11:64639425-64639319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-153
               

               
Cow position:
               
chr11:25525113-25525251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
17-185
               

               
Cow position:
               
chr11:2057050-2057218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
18-185
               

               
Cow position:
               
chr11:19787470-19787638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
18-185
               

               
Cow position:
               
chr11:30110279-30110446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 105
               

               
Conread position:
               
19-155
               

               
Cow position:
               
chr11:35881100-35881236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-180
               

               
Cow position:
               
chr11:18537929-18537767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
21-180
               

               
Cow position:
               
chr11:61891279-61891439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
23-185
               

               
Cow position:
               
chr11:38330186-38330025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 149
               

               
Conread position:
               
28-153
               

               
Cow position:
               
chr11:27386986-27386860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
34-180
               

               
Cow position:
               
chr11:47655081-47655228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
35-180
               

               
Cow position:
               
chr11:34277070-34277217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
35-180
               

               
Cow position:
               
chr11:34278351-34278497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
35-180
               

               
Cow position:
               
chr11:47972579-47972435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr11:4383967-4384118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr11:8212114-8212264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr11:32067683-32067534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr11:75480700-75480546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr11:58587651-58587804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 121
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr11:4675333-4675178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
36-180
               

               
Cow position:
               
chr11:31860213-31860358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
36-180
               

               
Cow position:
               
chr11:43537202-43537057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
37-141
               

               
Cow position:
               
chr11:7925401-7925297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-185
               

               
Cow position:
               
chr11:58973501-58973350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
38-176
               

               
Cow position:
               
chr11:33192976-33192837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
39-157
               

               
Cow position:
               
chr11:2912280-2912163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
39-158
               

               
Cow position:
               
chr11:66945303-66945185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
108, 88
               

               
Conread position:
               
39-166
               

               
Cow position:
               
chr11:8495395-8495519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
39-180
               

               
Cow position:
               
chr11:67804070-67804212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
39-180
               

               
Cow position:
               
chr11:77759407-77759266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 119
               

               
Conread position:
               
39-185
               

               
Cow position:
               
chr11:1504704-1504557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
40-185
               

               
Cow position:
               
chr11:32076795-32076649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
107, 127
               

               
Conread position:
               
42-180
               

               
Cow position:
               
chr11:33012237-33012376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
42-180
               

               
Cow position:
               
chr11:74991398-74991538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
42-185
               

               
Cow position:
               
chr11:23883625-23883769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
105, 125
               

               
Conread position:
               
42-185
               

               
Cow position:
               
chr11:49679800-49679656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
42-185
               

               
Cow position:
               
chr11:70030942-70031087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
43-158
               

               
Cow position:
               
chr11:18146271-18146157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
43-185
               

               
Cow position:
               
chr11:6877168-6877311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
43-186
               

               
Cow position:
               
chr11:8340036-8339898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 81
               

               
Conread position:
               
43-188
               

               
Cow position:
               
chr11:77032297-77032150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 124
               

               
Conread position:
               
44-178
               

               
Cow position:
               
chr11:29948769-29948635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
103, 88
               

               
Conread position:
               
44-185
               

               
Cow position:
               
chr11:21894793-21894650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
45-185
               

               
Cow position:
               
chr11:30700781-30700920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
45-185
               

               
Cow position:
               
chr11:43431328-43431188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
102, 107
               

               
Conread position:
               
46-185
               

               
Cow position:
               
chr11:37292206-37292345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
48-180
               

               
Cow position:
               
chr11:67306489-67306356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
48-185
               

               
Cow position:
               
chr11:37911571-37911709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
49-177
               

               
Cow position:
               
chr11:17318337-17318467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
50-178
               

               
Cow position:
               
chr11:30164852-30164981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
50-185
               

               
Cow position:
               
chr11:67932352-67932216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
52-178
               

               
Cow position:
               
chr11:67346270-67346144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
52-180
               

               
Cow position:
               
chr11:32746911-32747040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
54-185
               

               
Cow position:
               
chr11:40772339-40772207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
55-180
               

               
Cow position:
               
chr11:82990684-82990810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
55-185
               

               
Cow position:
               
chr11:7873517-7873649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
59-180
               

               
Cow position:
               
chr11:41041334-41041212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               
Show alignments to all cow chromosomes.