• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8050K11.5
        

               
Conread position:
               
1-115
               

               
Cow position:
               
chr28:13242724-13242611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr28:17314977-17315097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr28:22171527-22171407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr28:19834680-19834801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr28:17686055-17685935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr28:12968626-12968503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr28:30328344-30328221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr28:7814447-7814570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr28:16215556-16215420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr28:7882151-7882291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr28:21767557-21767417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr28:10303419-10303560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr28:15375480-15375342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr28:615563-615706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr28:1383871-1383725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr28:14150569-14150719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr28:17131280-17131126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr28:23544205-23544358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr28:13143336-13143182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr28:600607-600453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr28:3012604-3012445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr28:15429245-15429401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr28:21363098-21363253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 127
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr28:23868816-23868972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr28:24997329-24997170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr28:28116192-28116351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr28:29823767-29823926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr28:13463545-13463705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr28:6319569-6319396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr28:25828146-25828318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 156
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr28:3750711-3750886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr28:21844284-21844461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr28:7807508-7807685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr28:12081343-12081172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr28:23793994-23793818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 156
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr28:2422291-2422471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr28:3745532-3745711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr28:6972600-6972421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr28:8786891-8787068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr28:22279858-22279677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:332030-332211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:482128-481947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:1198777-1198958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:1943714-1943533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:1956945-1957126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:2616242-2616061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:2645295-2645476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:5311768-5311587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:5336223-5336042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 158
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:5637632-5637813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:6478800-6478981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:6484912-6484731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:6535215-6535034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:7336568-7336749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:7888503-7888322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:7906965-7906784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:8110915-8111096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:9182451-9182632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:9287811-9287630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:9420022-9419841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:9710572-9710391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:10190661-10190484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:10193453-10193272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:10562986-10563157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:10589677-10589496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:10699641-10699462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:10870671-10870852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:11356605-11356426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:12117658-12117477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:12156261-12156442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:12701449-12701630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:12981225-12981043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:13536258-13536439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:15047790-15047971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:15605106-15605286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:15966012-15965831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:16597729-16597910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:17602454-17602282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:17663367-17663186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:18559394-18559213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:19185805-19185986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:20967087-20966906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:22353693-22353873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:22582363-22582544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:22735656-22735837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:23309754-23309573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:23478044-23477863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:24886442-24886622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:24993069-24993250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:27478350-27478530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:27754538-27754718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:27938402-27938583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:28471599-28471780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:28934381-28934200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:29222704-29222524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:29435223-29435044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:30031921-30032101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:30249708-30249889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:32589281-32589462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:33689091-33689272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:34655665-34655847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr28:34731313-34731494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr28:8971568-8971745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:958441-958626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:1508460-1508642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:1811414-1811228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:1837328-1837516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:2948871-2949055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:3024598-3024412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:3914044-3914223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:4214473-4214659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:5361685-5361502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:5748124-5747938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:5768529-5768716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:5772989-5773177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:5817181-5817369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:5941068-5941255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 168
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:6047373-6047559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:6485934-6486121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:7005610-7005796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:7685351-7685162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:9184859-9184673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:10530143-10529951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:10772659-10772838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
146, 124
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:11752827-11752634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:12406595-12406409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:12429786-12429969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:12650798-12650986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 169
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:12935691-12935506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:13372959-13372773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:13865132-13865314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:13889413-13889227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 168
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:14234318-14234502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:15712589-15712775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 167
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:16347180-16346996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
146, 105
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:17369635-17369817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 121
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:17627601-17627417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:17738459-17738641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:19023758-19023565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:19300605-19300788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:20934817-20934631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:21354551-21354737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:21380072-21380255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:22254620-22254425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:23773776-23773587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:24603508-24603693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:25248702-25248887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:25826531-25826346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:26728084-26727898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:26781410-26781596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:26923049-26922865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:28723802-28723986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:28766567-28766385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:29036069-29035883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:29199060-29199242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:30098458-30098644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:30303859-30303674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:30532413-30532229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:32730320-32730134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:33255902-33256076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
165, 12
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:33640150-33640337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 168
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:34082688-34082502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr28:34597827-34598008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr28:3770662-3770475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr28:6959813-6960003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr28:11501644-11501456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr28:22322588-22322769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr28:25128655-25128466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr28:29806863-29806673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr28:5825427-5825622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr28:15410182-15410373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr28:34878868-34878677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr28:7722999-7722802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr28:18516563-18516366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr28:26419419-26419222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr28:4957920-4957720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
2-140
               

               
Cow position:
               
chr28:19194101-19194240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-143
               

               
Cow position:
               
chr28:8717375-8717233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
2-151
               

               
Cow position:
               
chr28:14666719-14666864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chr28:5770702-5770856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chr28:21867665-21867816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr28:6090491-6090649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr28:15272928-15272755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr28:25070428-25070609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr28:5792039-5792218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr28:19552804-19552622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr28:24487812-24487632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr28:25828978-25829158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr28:28357202-28357022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr28:34581770-34581590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr28:786241-786425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 159
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr28:1214221-1214044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr28:7372922-7372738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr28:15063995-15063810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 162
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr28:17356691-17356513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 106
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr28:17576874-17576692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 127
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr28:24671607-24671784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr28:31842355-31842170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr28:2522705-2522894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
3-158
               

               
Cow position:
               
chr28:5111140-5110983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
3-158
               

               
Cow position:
               
chr28:28340625-28340785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr28:7830142-7830324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr28:15916942-15916763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr28:22304191-22304374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 172
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr28:23615737-23615921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr28:29726499-29726683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 156
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr28:10280413-10280588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr28:330225-330042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr28:3001281-3001098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr28:5804848-5805031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr28:13357380-13357199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr28:23839551-23839728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr28:29682823-29683000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr28:25767559-25767742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
8-185
               

               
Cow position:
               
chr28:22132261-22132435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
9-185
               

               
Cow position:
               
chr28:8371811-8371995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
10-131
               

               
Cow position:
               
chr28:17355451-17355330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-177
               

               
Cow position:
               
chr28:30870665-30870828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
11-158
               

               
Cow position:
               
chr28:18180794-18180647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
12-173
               

               
Cow position:
               
chr28:13473417-13473576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
12-178
               

               
Cow position:
               
chr28:12165910-12165744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
132, 99
               

               
Conread position:
               
12-178
               

               
Cow position:
               
chr28:29043963-29044130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr28:16181942-16182110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr28:444993-445162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr28:13014639-13014471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
135, 149
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr28:15107986-15107817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 149
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr28:25683615-25683446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr28:11787365-11787183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
14-180
               

               
Cow position:
               
chr28:7981367-7981195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 163
               

               
Conread position:
               
14-189
               

               
Cow position:
               
chr28:4187896-4188069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 62
               

               
Conread position:
               
15-180
               

               
Cow position:
               
chr28:34580061-34579895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
15-196
               

               
Cow position:
               
chr28:10473550-10473732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
122, 96
               

               
Conread position:
               
16-180
               

               
Cow position:
               
chr28:4938057-4938219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 34
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr28:7021030-7020862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 36
               

               
Conread position:
               
18-185
               

               
Cow position:
               
chr28:25056317-25056483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
19-180
               

               
Cow position:
               
chr28:16371439-16371275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 103
               

               
Conread position:
               
19-180
               

               
Cow position:
               
chr28:24592111-24592273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
20-141
               

               
Cow position:
               
chr28:25424995-25424874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-176
               

               
Cow position:
               
chr28:11452127-11451971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
22-185
               

               
Cow position:
               
chr28:4535831-4535994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 30
               

               
Conread position:
               
27-141
               

               
Cow position:
               
chr28:15032510-15032396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
28-185
               

               
Cow position:
               
chr28:16211741-16211579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
30-222
               

               
Cow position:
               
chr28:2088879-2089072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr28:23685655-23685800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
35-180
               

               
Cow position:
               
chr28:1575888-1575742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
35-180
               

               
Cow position:
               
chr28:6060416-6060271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
112, 136
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr28:28798926-28798764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
37-185
               

               
Cow position:
               
chr28:4070332-4070478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
109, 86
               

               
Conread position:
               
38-180
               

               
Cow position:
               
chr28:16246886-16246743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
38-189
               

               
Cow position:
               
chr28:25762407-25762556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
109, 86
               

               
Conread position:
               
39-158
               

               
Cow position:
               
chr28:18355473-18355355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
39-180
               

               
Cow position:
               
chr28:21491805-21491663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
39-180
               

               
Cow position:
               
chr28:34754273-34754131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
40-185
               

               
Cow position:
               
chr28:16003155-16003301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
41-180
               

               
Cow position:
               
chr28:3479428-3479288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
42-180
               

               
Cow position:
               
chr28:15286252-15286113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
42-185
               

               
Cow position:
               
chr28:3627699-3627843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
42-185
               

               
Cow position:
               
chr28:7745713-7745850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
44-185
               

               
Cow position:
               
chr28:25721341-25721482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
45-180
               

               
Cow position:
               
chr28:8022738-8022602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
45-185
               

               
Cow position:
               
chr28:14742170-14742311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
45-185
               

               
Cow position:
               
chr28:17392192-17392333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
102, 116
               

               
Conread position:
               
47-185
               

               
Cow position:
               
chr28:23530247-23530386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
49-185
               

               
Cow position:
               
chr28:10578240-10578104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 117
               

               
Conread position:
               
50-180
               

               
Cow position:
               
chr28:6776256-6776125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
50-185
               

               
Cow position:
               
chr28:10900199-10900334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
97, 79
               

               
Conread position:
               
51-190
               

               
Cow position:
               
chr28:26370287-26370426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
63-158
               

               
Cow position:
               
chr28:3188297-3188201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
71-185
               

               
Cow position:
               
chr28:24674119-24674234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
71-189
               

               
Cow position:
               
chr28:16386969-16387088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
76, 0
               
Show alignments to all cow chromosomes.