Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050M23.5 |
| Conread position: | 276-388 |
| Cow position: | chr18:51863156-51863268 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 378-530 |
| Cow position: | chr18:49038994-49038841 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 379-516 |
| Cow position: | chr18:55531951-55531815 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 380-530 |
| Cow position: | chr18:50278841-50278991 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 380-536 |
| Cow position: | chr18:42728299-42728143 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 381-685 |
| Cow position: | chr18:51753311-51753015 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 166 |
| Conread position: | 384-493 |
| Cow position: | chr18:51373603-51373494 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-516 |
| Cow position: | chr18:44195351-44195219 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-519 |
| Cow position: | chr18:56332268-56332133 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-536 |
| Cow position: | chr18:50653454-50653302 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-536 |
| Cow position: | chr18:52421795-52421948 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 384-536 |
| Cow position: | chr18:52442014-52442167 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 384-587 |
| Cow position: | chr18:51867649-51867852 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 177 |
| Conread position: | 384-705 |
| Cow position: | chr18:51819674-51819353 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-739 |
| Cow position: | chr18:51844478-51844119 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 184 |
| Conread position: | 384-740 |
| Cow position: | chr18:51796386-51796026 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 0 |
| Conread position: | 384-746 |
| Cow position: | chr18:51396937-51397297 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 274 |
| Conread position: | 385-519 |
| Cow position: | chr18:50052085-50051951 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 385-530 |
| Cow position: | chr18:50095780-50095925 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-552 |
| Cow position: | chr18:56288182-56288017 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 386-729 |
| Cow position: | chr18:51771803-51771469 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 160 |
| Conread position: | 395-516 |
| Cow position: | chr18:55506800-55506679 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 395-519 |
| Cow position: | chr18:52015239-52015115 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 395-521 |
| Cow position: | chr18:33069658-33069532 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 395-531 |
| Cow position: | chr18:50077716-50077851 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 395-577 |
| Cow position: | chr18:42844429-42844247 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 397-530 |
| Cow position: | chr18:50267453-50267586 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.