Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050O08.5 |
| Conread position: | 1-286 |
| Cow position: | chr17:22473427-22473711 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 260, 0 |
| Conread position: | 3-251 |
| Cow position: | chr17:22551749-22551501 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 5-349 |
| Cow position: | chr17:22553007-22552667 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 9-336 |
| Cow position: | chr17:22590253-22589926 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 155, 178 |
| Conread position: | 17-252 |
| Cow position: | chr17:22452272-22452037 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-349 |
| Cow position: | chr17:22552155-22551827 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 241, 0 |
| Conread position: | 17-349 |
| Cow position: | chr17:22552407-22552079 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 17-349 |
| Cow position: | chr17:22552911-22552583 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 17-349 |
| Cow position: | chr17:22589657-22589329 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 18-285 |
| Cow position: | chr17:22589908-22589642 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-341 |
| Cow position: | chr17:22552742-22552423 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-343 |
| Cow position: | chr17:22551986-22551665 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-343 |
| Cow position: | chr17:22552574-22552253 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 195, 206 |
| Conread position: | 18-346 |
| Cow position: | chr17:22552490-22552166 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 32, 28 |
| Conread position: | 18-349 |
| Cow position: | chr17:22551818-22551491 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 32, 28 |
| Conread position: | 18-349 |
| Cow position: | chr17:22552238-22551911 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 240, 0 |
| Conread position: | 18-349 |
| Cow position: | chr17:22553078-22552751 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 28 |
| Conread position: | 18-349 |
| Cow position: | chr17:22589740-22589413 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-352 |
| Cow position: | chr17:22452187-22451857 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-356 |
| Cow position: | chr17:22589824-22589490 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 275, 240 |
| Conread position: | 27-349 |
| Cow position: | chr17:22551893-22551575 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 263, 232 |
| Conread position: | 37-284 |
| Cow position: | chr17:22590308-22590063 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 5 |
| Conread position: | 38-333 |
| Cow position: | chr17:22589468-22589177 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 51-285 |
| Cow position: | chr17:22499168-22498936 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 55-296 |
| Cow position: | chr17:22451982-22451742 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 56-268 |
| Cow position: | chr17:22589366-22589156 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 56-284 |
| Cow position: | chr17:22473398-22473625 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 56-349 |
| Cow position: | chr17:22452401-22452112 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 56-349 |
| Cow position: | chr17:22499331-22499042 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 227, 206 |
Show alignments to all cow chromosomes.