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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8050O08.5
        

               
Conread position:
               
1-250
               

               
Cow position:
               
chr18:56128719-56128968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr18:50271891-50272142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
132, 118
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:42837506-42837224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
260, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:53559936-53560220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
131, 122
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:53586569-53586275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:40075033-40075338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:44240523-44240846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
202, 209
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr18:42984794-42984470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
202, 210
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr18:41198257-41198592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
321, 260
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr18:1418012-1418354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:41197753-41198097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
204, 189
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:41197921-41198265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
260, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:41949170-41948826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
261, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:42744623-42744279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
260, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:43022977-43022633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:43093408-43093064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
311, 260
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:43175262-43174918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
312, 260
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr18:44398261-44397917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
260, 0
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr18:55523907-55524227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr18:44253712-44253370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
209, 193
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr18:50246593-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr18:50282106-50282356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr18:41949252-41948998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
196, 207
               

               
Conread position:
               
3-327
               

               
Cow position:
               
chr18:42827584-42827904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
283, 255
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr18:50849187-50849523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 0
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr18:40324284-40323949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
258, 0
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr18:43093574-43093238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
284, 255
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr18:33093010-33092670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
311, 258
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr18:42675141-42674801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr18:43093656-43093325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
317, 256
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr18:44253877-44253537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr18:49033199-49032909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
281, 256
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr18:49032608-49032339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 45
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr18:49032944-49032670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr18:50246431-50246714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr18:51400298-51400625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
313, 252
               

               
Conread position:
               
9-343
               

               
Cow position:
               
chr18:50848773-50849103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
9-346
               

               
Cow position:
               
chr18:41198013-41198346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
252, 0
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr18:42674883-42674547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
213, 198
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr18:42744699-42744363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
252, 0
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr18:42792074-42792410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 253
               

               
Conread position:
               
12-259
               

               
Cow position:
               
chr18:52446960-52447208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr18:52427905-52428181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 202
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr18:52433086-52433362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
7, 250
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr18:52433674-52433952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
7, 250
               

               
Conread position:
               
12-343
               

               
Cow position:
               
chr18:52428661-52428989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
7, 242
               

               
Conread position:
               
12-343
               

               
Cow position:
               
chr18:52433842-52434170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 242
               

               
Conread position:
               
12-349
               

               
Cow position:
               
chr18:52427737-52428071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 250
               

               
Conread position:
               
12-349
               

               
Cow position:
               
chr18:52433506-52433840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
12-349
               

               
Cow position:
               
chr18:52447968-52448303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
7, 250
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr18:50059433-50059101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
271, 245
               

               
Conread position:
               
14-257
               

               
Cow position:
               
chr18:56316492-56316735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-252
               

               
Cow position:
               
chr18:44184276-44184037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
15-346
               

               
Cow position:
               
chr18:50059515-50059188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr18:56329069-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-246
               

               
Cow position:
               
chr18:53586469-53586240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
17-249
               

               
Cow position:
               
chr18:53560540-53560772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-250
               

               
Cow position:
               
chr18:49033020-49032787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-250
               

               
Cow position:
               
chr18:53635430-53635197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chr18:50048693-50048458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-280
               

               
Cow position:
               
chr18:50246019-50246281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
245, 0
               

               
Conread position:
               
17-284
               

               
Cow position:
               
chr18:49023008-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
251, 0
               

               
Conread position:
               
17-284
               

               
Cow position:
               
chr18:50099085-50099351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
241, 0
               

               
Conread position:
               
17-286
               

               
Cow position:
               
chr18:55066832-55066564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 116
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr18:51789447-51789177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
254, 244
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr18:42960105-42959835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr18:56329405-56329131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
245, 0
               

               
Conread position:
               
17-296
               

               
Cow position:
               
chr18:49032852-49032574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
242, 0
               

               
Conread position:
               
17-296
               

               
Cow position:
               
chr18:50083476-50083754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr18:42693770-42693490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
245, 0
               

               
Conread position:
               
17-308
               

               
Cow position:
               
chr18:50295382-50295671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
17-326
               

               
Cow position:
               
chr18:50049029-50048724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
116, 105
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr18:50246523-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
308, 241
               

               
Conread position:
               
17-341
               

               
Cow position:
               
chr18:51400726-51401046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
17-341
               

               
Cow position:
               
chr18:53560372-53560692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
17-343
               

               
Cow position:
               
chr18:49032684-49032362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
245, 0
               

               
Conread position:
               
17-343
               

               
Cow position:
               
chr18:50281952-50282274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
181, 196
               

               
Conread position:
               
17-347
               

               
Cow position:
               
chr18:49033104-49032778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
245, 0
               

               
Conread position:
               
17-347
               

               
Cow position:
               
chr18:50246187-50246513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
294, 242
               

               
Conread position:
               
17-349
               

               
Cow position:
               
chr18:42792334-42792662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 242
               

               
Conread position:
               
17-349
               

               
Cow position:
               
chr18:43093476-43093148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
245, 0
               

               
Conread position:
               
17-349
               

               
Cow position:
               
chr18:43168070-43168398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
241, 0
               

               
Conread position:
               
17-349
               

               
Cow position:
               
chr18:50083644-50083972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
17-349
               

               
Cow position:
               
chr18:52447386-52447714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
17-349
               

               
Cow position:
               
chr18:56247375-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
302, 240
               

               
Conread position:
               
18-199
               

               
Cow position:
               
chr18:42837321-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-201
               

               
Cow position:
               
chr18:50083813-50083996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr18:56248132-56247909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr18:50281869-50282095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-246
               

               
Cow position:
               
chr18:40307120-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
120, 105
               

               
Conread position:
               
18-251
               

               
Cow position:
               
chr18:50059596-50059363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-252
               

               
Cow position:
               
chr18:1418365-1418599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-252
               

               
Cow position:
               
chr18:50100094-50100328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-255
               

               
Cow position:
               
chr18:43168323-43168558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
221, 0
               

               
Conread position:
               
18-256
               

               
Cow position:
               
chr18:14453093-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-256
               

               
Cow position:
               
chr18:44184439-44184201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-257
               

               
Cow position:
               
chr18:50848866-50849105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-259
               

               
Cow position:
               
chr18:40075470-40075710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 102
               

               
Conread position:
               
18-277
               

               
Cow position:
               
chr18:14453993-14453735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
18-278
               

               
Cow position:
               
chr18:56494291-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
226, 0
               

               
Conread position:
               
18-280
               

               
Cow position:
               
chr18:50083897-50084158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
18-280
               

               
Cow position:
               
chr18:54979587-54979848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
120, 102
               

               
Conread position:
               
18-284
               

               
Cow position:
               
chr18:50099002-50099267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
18-284
               

               
Cow position:
               
chr18:56329656-56329391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr18:40324689-40324423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr18:42744102-42743837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-286
               

               
Cow position:
               
chr18:40324185-40323919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
236, 0
               

               
Conread position:
               
18-286
               

               
Cow position:
               
chr18:42791663-42791930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-286
               

               
Cow position:
               
chr18:50250946-50251209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
18-286
               

               
Cow position:
               
chr18:53525887-53526154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
18-288
               

               
Cow position:
               
chr18:52428164-52428433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
187, 195
               

               
Conread position:
               
18-289
               

               
Cow position:
               
chr18:50083981-50084250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
18-290
               

               
Cow position:
               
chr18:52433345-52433616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-290
               

               
Cow position:
               
chr18:53586972-53586701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
18-292
               

               
Cow position:
               
chr18:49033355-49033082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr18:42791159-42791433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr18:50271488-50271762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 101
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr18:50271572-50271846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr18:50848446-50848720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr18:53586300-53586027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
134, 126
               

               
Conread position:
               
18-296
               

               
Cow position:
               
chr18:51839114-51838837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-297
               

               
Cow position:
               
chr18:50022037-50021759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
18-297
               

               
Cow position:
               
chr18:50022376-50022098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
18-297
               

               
Cow position:
               
chr18:50848614-50848892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-301
               

               
Cow position:
               
chr18:43167987-43168269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
18-301
               

               
Cow position:
               
chr18:49022841-49023123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
18-326
               

               
Cow position:
               
chr18:53560457-53560761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
18-328
               

               
Cow position:
               
chr18:42791075-42791381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
18-335
               

               
Cow position:
               
chr18:55523503-55523818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr18:50059092-50058774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
302, 243
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr18:50099170-50099488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 100
               

               
Conread position:
               
18-339
               

               
Cow position:
               
chr18:33063903-33063587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
292, 244
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr18:50083309-50083628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
109, 100
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr18:50271824-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr18:50848698-50849017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr18:51752224-51751905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr18:52447891-52448210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr18:41949321-41949000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
294, 243
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr18:42791999-42792320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr18:42792251-42792572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr18:50022292-50021968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
213, 246
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr18:50099590-50099911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr18:52448059-52448381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr18:55067083-55066763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 114
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr18:56493871-56494191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
18-346
               

               
Cow position:
               
chr18:33063987-33063663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
295, 241
               

               
Conread position:
               
18-346
               

               
Cow position:
               
chr18:50099842-50100166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
108, 113
               

               
Conread position:
               
18-346
               

               
Cow position:
               
chr18:55523755-55524079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
18-347
               

               
Cow position:
               
chr18:42744438-42744113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
292, 244
               

               
Conread position:
               
18-347
               

               
Cow position:
               
chr18:42792587-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:41197602-41197929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:41197686-41198013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
272, 240
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:41198190-41198517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
269, 243
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:41948817-41948490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:41948901-41948574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
185, 194
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:41949069-41948742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
185, 193
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:42744270-42743943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 36
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:42791411-42791738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
266, 235
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:42791831-42792158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:42827515-42827842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
269, 240
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:42837573-42837246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
265, 240
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:42837909-42837582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
265, 243
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:42985113-42984786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:42985365-42985038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:43048701-43048374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:43093724-43093400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
179, 52
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:43167819-43168146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
266, 243
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:43168155-43168482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:43175161-43174834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
265, 243
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:44397908-44397581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:44398328-44398001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:50048860-50048533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
185, 196
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:50099338-50099665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:50271656-50271983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:50295299-50295626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:50848950-50849277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
222, 251
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:52428416-52428743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:52447639-52447966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr18:52447807-52448134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
18-352
               

               
Cow position:
               
chr18:42791747-42792077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
18-354
               

               
Cow position:
               
chr18:44398076-44397744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
19-343
               

               
Cow position:
               
chr18:50295216-50295536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
20-347
               

               
Cow position:
               
chr18:42790993-42791316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
241, 0
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr18:49032511-49032283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-327
               

               
Cow position:
               
chr18:51367645-51367347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
27-333
               

               
Cow position:
               
chr18:50058747-50058445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
234, 0
               

               
Conread position:
               
27-335
               

               
Cow position:
               
chr18:50021944-50021635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
27-349
               

               
Cow position:
               
chr18:40324929-40324614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
27-349
               

               
Cow position:
               
chr18:42675033-42674715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
102, 95
               

               
Conread position:
               
27-349
               

               
Cow position:
               
chr18:42675201-42674883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
28-296
               

               
Cow position:
               
chr18:1418291-1418558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
234, 0
               

               
Conread position:
               
29-286
               

               
Cow position:
               
chr18:50059249-50058993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
30-349
               

               
Cow position:
               
chr18:55018003-55018318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 107
               

               
Conread position:
               
35-300
               

               
Cow position:
               
chr18:54979520-54979784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
168, 177
               

               
Conread position:
               
35-347
               

               
Cow position:
               
chr18:1418214-1418522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
226, 0
               

               
Conread position:
               
39-293
               

               
Cow position:
               
chr18:50098939-50099192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
39-293
               

               
Cow position:
               
chr18:54967251-54967504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
223, 0
               

               
Conread position:
               
39-335
               

               
Cow position:
               
chr18:50021677-50021382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
287, 219
               

               
Conread position:
               
39-343
               

               
Cow position:
               
chr18:50083246-50083546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
42-349
               

               
Cow position:
               
chr18:40324581-40324278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
294, 219
               

               
Conread position:
               
42-349
               

               
Cow position:
               
chr18:43022348-43022045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
42-349
               

               
Cow position:
               
chr18:43120104-43119801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
272, 219
               

               
Conread position:
               
43-335
               

               
Cow position:
               
chr18:53509711-53509998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
44-349
               

               
Cow position:
               
chr18:42959751-42959450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
48-304
               

               
Cow position:
               
chr18:53526086-53526340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
155, 8
               

               
Conread position:
               
49-286
               

               
Cow position:
               
chr18:53560068-53560304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
49-349
               

               
Cow position:
               
chr18:43119929-43119633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
51-289
               

               
Cow position:
               
chr18:40075167-40075404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
51-343
               

               
Cow position:
               
chr18:33064626-33064338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
51-349
               

               
Cow position:
               
chr18:33064794-33064500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
258, 211
               

               
Conread position:
               
51-349
               

               
Cow position:
               
chr18:41197551-41197845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
51-349
               

               
Cow position:
               
chr18:50049251-50048953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 215
               

               
Conread position:
               
52-335
               

               
Cow position:
               
chr18:53526173-53526452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
112, 122
               

               
Conread position:
               
53-343
               

               
Cow position:
               
chr18:41198143-41198427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
53-356
               

               
Cow position:
               
chr18:14454042-14453743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
54-341
               

               
Cow position:
               
chr18:51839162-51838879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
56-256
               

               
Cow position:
               
chr18:44184905-44184705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-285
               

               
Cow position:
               
chr18:44184485-44184258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
56-285
               

               
Cow position:
               
chr18:44239990-44240217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 156
               

               
Conread position:
               
56-285
               

               
Cow position:
               
chr18:56248176-56247951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
56-286
               

               
Cow position:
               
chr18:53498541-53498770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
226, 206
               

               
Conread position:
               
56-341
               

               
Cow position:
               
chr18:51812231-51811950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
56-347
               

               
Cow position:
               
chr18:42837703-42837416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
56-347
               

               
Cow position:
               
chr18:43022586-43022299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
212, 205
               

               
Conread position:
               
56-349
               

               
Cow position:
               
chr18:40324735-40324446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
215, 0
               

               
Conread position:
               
56-349
               

               
Cow position:
               
chr18:42790945-42791234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
56-349
               

               
Cow position:
               
chr18:43119838-43119549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
56-349
               

               
Cow position:
               
chr18:43174787-43174498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 155
               

               
Conread position:
               
56-349
               

               
Cow position:
               
chr18:43175291-43175002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
147, 153
               

               
Conread position:
               
56-349
               

               
Cow position:
               
chr18:44184569-44184280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
56-349
               

               
Cow position:
               
chr18:50059138-50058849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
236, 201
               

               
Conread position:
               
57-250
               

               
Cow position:
               
chr18:56494246-56494439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
57-256
               

               
Cow position:
               
chr18:55523710-55523909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-285
               

               
Cow position:
               
chr18:42744147-42743921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
57-286
               

               
Cow position:
               
chr18:42837618-42837390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 153
               

               
Conread position:
               
57-286
               

               
Cow position:
               
chr18:54979962-54980190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
57-286
               

               
Cow position:
               
chr18:55008961-55009189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
57-286
               

               
Cow position:
               
chr18:55018282-55018510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
57-291
               

               
Cow position:
               
chr18:54992970-54993202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
57-295
               

               
Cow position:
               
chr18:56316115-56316351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
57-340
               

               
Cow position:
               
chr18:50271443-50271722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
57-340
               

               
Cow position:
               
chr18:51812734-51812455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
147, 166
               

               
Conread position:
               
57-341
               

               
Cow position:
               
chr18:51752101-51751821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
57-341
               

               
Cow position:
               
chr18:51789575-51789295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 166
               

               
Conread position:
               
57-341
               

               
Cow position:
               
chr18:51812566-51812286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
57-343
               

               
Cow position:
               
chr18:54993306-54993587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
150, 138
               

               
Conread position:
               
57-347
               

               
Cow position:
               
chr18:44240411-44240697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
253, 205
               

               
Conread position:
               
57-349
               

               
Cow position:
               
chr18:40324314-40324026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
57-349
               

               
Cow position:
               
chr18:42675255-42674967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
57-349
               

               
Cow position:
               
chr18:42984906-42984618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
146, 152
               

               
Conread position:
               
62-285
               

               
Cow position:
               
chr18:43048741-43048520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
65-349
               

               
Cow position:
               
chr18:42744727-42744447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
69-294
               

               
Cow position:
               
chr18:55523638-55523862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
148-349
               

               
Cow position:
               
chr18:43048739-43048542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
468-729
               

               
Cow position:
               
chr18:50849517-50849767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
55, 29
               
Show alignments to all cow chromosomes.