Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050O08.5 |
| Conread position: | 1-285 |
| Cow position: | chr19:43570214-43569932 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 260, 0 |
| Conread position: | 1-343 |
| Cow position: | chr19:23613442-23613780 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 260, 0 |
| Conread position: | 1-349 |
| Cow position: | chr19:23614282-23614626 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 309, 260 |
| Conread position: | 3-341 |
| Cow position: | chr19:14940168-14940502 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 261, 246 |
| Conread position: | 9-341 |
| Cow position: | chr19:14940510-14940838 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 9-341 |
| Cow position: | chr19:23597215-23597543 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 9-349 |
| Cow position: | chr19:23614458-23614794 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 301, 252 |
| Conread position: | 17-260 |
| Cow position: | chr19:14960115-14959872 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-343 |
| Cow position: | chr19:23597307-23597629 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 17-346 |
| Cow position: | chr19:23650084-23650409 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 103, 114 |
| Conread position: | 17-354 |
| Cow position: | chr19:14940434-14940767 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 18-199 |
| Cow position: | chr19:20635354-20635173 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-283 |
| Cow position: | chr19:14948356-14948092 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 241, 0 |
| Conread position: | 18-284 |
| Cow position: | chr19:14948439-14948175 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 18-326 |
| Cow position: | chr19:23649581-23649885 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 253, 243 |
| Conread position: | 18-347 |
| Cow position: | chr19:14940687-14941012 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 289, 243 |
| Conread position: | 18-349 |
| Cow position: | chr19:14940267-14940594 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 289, 240 |
| Conread position: | 18-349 |
| Cow position: | chr19:14960448-14960123 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 110, 104 |
| Conread position: | 18-349 |
| Cow position: | chr19:20678230-20678557 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-349 |
| Cow position: | chr19:23613375-23613702 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-349 |
| Cow position: | chr19:23614047-23614374 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 292, 240 |
| Conread position: | 18-349 |
| Cow position: | chr19:43570029-43569704 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 20-339 |
| Cow position: | chr19:14960194-14959881 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 267, 41 |
| Conread position: | 28-284 |
| Cow position: | chr19:23649675-23649930 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 233, 0 |
| Conread position: | 32-328 |
| Cow position: | chr19:23613973-23614269 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 233 |
| Conread position: | 36-251 |
| Cow position: | chr19:14959119-14958904 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-245 |
| Cow position: | chr19:14959029-14958826 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 100 |
| Conread position: | 51-260 |
| Cow position: | chr19:23649446-23649655 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-349 |
| Cow position: | chr19:20677764-20678053 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 56-349 |
| Cow position: | chr19:23613749-23614038 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 57-285 |
| Cow position: | chr19:43570242-43570016 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 57-290 |
| Cow position: | chr19:23597095-23597327 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 57-336 |
| Cow position: | chr19:23613918-23614197 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 57-343 |
| Cow position: | chr19:23613666-23613948 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 238, 204 |
| Conread position: | 57-349 |
| Cow position: | chr19:23613582-23613870 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 279, 204 |
| Conread position: | 63-287 |
| Cow position: | chr19:20635561-20635338 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 198, 0 |
Show alignments to all cow chromosomes.