Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050O08.5 |
| Conread position: | 1-250 |
| Cow position: | chr22:12499718-12499967 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 1-278 |
| Cow position: | chr22:12419288-12419012 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 267, 0 |
| Conread position: | 1-285 |
| Cow position: | chr22:12499550-12499833 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 1-349 |
| Cow position: | chr22:12475877-12475533 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 1-349 |
| Cow position: | chr22:12499382-12499726 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 3-329 |
| Cow position: | chr22:12418933-12418611 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 259, 0 |
| Conread position: | 9-247 |
| Cow position: | chr22:12385146-12384908 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-349 |
| Cow position: | chr22:12399660-12399324 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 9-349 |
| Cow position: | chr22:12499474-12499810 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 17-251 |
| Cow position: | chr22:12431212-12430978 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-291 |
| Cow position: | chr22:12475609-12475336 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 17-347 |
| Cow position: | chr22:12385306-12384980 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 17-349 |
| Cow position: | chr22:12399400-12399072 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 18-238 |
| Cow position: | chr22:12398979-12398759 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-284 |
| Cow position: | chr22:12399147-12398882 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 18-341 |
| Cow position: | chr22:11640799-11641118 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 18-349 |
| Cow position: | chr22:12431127-12430800 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 172, 184 |
| Conread position: | 18-349 |
| Cow position: | chr22:12458247-12457920 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 280, 243 |
| Conread position: | 25-349 |
| Cow position: | chr22:12385721-12385398 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 42-285 |
| Cow position: | chr22:12498919-12499160 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 219, 0 |
| Conread position: | 42-349 |
| Cow position: | chr22:12476340-12476037 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 270, 219 |
| Conread position: | 51-349 |
| Cow position: | chr22:12431262-12430968 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 52-298 |
| Cow position: | chr22:12419321-12419076 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 53-333 |
| Cow position: | chr22:12399196-12398918 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 56-250 |
| Cow position: | chr22:12475486-12475292 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-252 |
| Cow position: | chr22:11641257-11641453 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 56-343 |
| Cow position: | chr22:12399445-12399162 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 254, 205 |
| Conread position: | 56-349 |
| Cow position: | chr22:12476410-12476121 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 256, 205 |
| Conread position: | 57-252 |
| Cow position: | chr22:12399696-12399501 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-340 |
| Cow position: | chr22:12430920-12430639 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 151, 133 |
| Conread position: | 58-349 |
| Cow position: | chr22:12458627-12458340 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 254, 204 |
Show alignments to all cow chromosomes.