Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050O08.5 |
| Conread position: | 1-263 |
| Cow position: | chr25:34447449-34447711 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-238 |
| Cow position: | chr25:33299586-33299815 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-238 |
| Cow position: | chr25:36801726-36801955 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-247 |
| Cow position: | chr25:33127985-33128223 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-250 |
| Cow position: | chr25:33157038-33156797 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-250 |
| Cow position: | chr25:33157206-33156965 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 124 |
| Conread position: | 9-251 |
| Cow position: | chr25:33299334-33299576 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 115 |
| Conread position: | 9-279 |
| Cow position: | chr25:36801642-36801911 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 9-286 |
| Cow position: | chr25:34447289-34447565 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 9-297 |
| Cow position: | chr25:33299502-33299789 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 9-347 |
| Cow position: | chr25:34447205-34447539 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 9-349 |
| Cow position: | chr25:33127733-33128069 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 9-349 |
| Cow position: | chr25:33299418-33299754 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 281, 252 |
| Conread position: | 17-278 |
| Cow position: | chr25:36800906-36801166 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 17-284 |
| Cow position: | chr25:34769765-34769499 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 17-289 |
| Cow position: | chr25:33299006-33299276 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 17-290 |
| Cow position: | chr25:23420574-23420846 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 247, 0 |
| Conread position: | 17-293 |
| Cow position: | chr25:36800654-36800929 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 17-326 |
| Cow position: | chr25:33298670-33298975 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 17-343 |
| Cow position: | chr25:33127825-33128147 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 17-343 |
| Cow position: | chr25:33145037-33145359 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 186, 195 |
| Conread position: | 17-349 |
| Cow position: | chr25:33157366-33157038 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 17-349 |
| Cow position: | chr25:33305941-33305619 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 269, 109 |
| Conread position: | 17-349 |
| Cow position: | chr25:34769681-34769353 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 17-349 |
| Cow position: | chr25:34770101-34769773 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 17-352 |
| Cow position: | chr25:33299090-33299421 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 17-352 |
| Cow position: | chr25:33299258-33299589 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 109, 124 |
| Conread position: | 18-238 |
| Cow position: | chr25:23420659-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-260 |
| Cow position: | chr25:22235853-22236095 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 18-278 |
| Cow position: | chr25:36801075-36801334 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 102, 111 |
| Conread position: | 18-293 |
| Cow position: | chr25:33298587-33298861 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 108, 114 |
| Conread position: | 18-333 |
| Cow position: | chr25:36800739-36801052 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 235, 252 |
| Conread position: | 18-336 |
| Cow position: | chr25:34447382-34447700 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 304, 230 |
| Conread position: | 18-347 |
| Cow position: | chr25:33298755-33299080 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 18-349 |
| Cow position: | chr25:23420407-23420734 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-349 |
| Cow position: | chr25:33298923-33299250 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 18-349 |
| Cow position: | chr25:33305295-33304971 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 251, 177 |
| Conread position: | 18-349 |
| Cow position: | chr25:34769932-34769605 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 240, 0 |
| Conread position: | 22-358 |
| Cow position: | chr25:23420327-23420659 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 179, 188 |
| Conread position: | 27-349 |
| Cow position: | chr25:33298512-33298830 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 29-201 |
| Cow position: | chr25:36800582-36800754 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-250 |
| Cow position: | chr25:33157425-33157217 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-347 |
| Cow position: | chr25:34770151-34769859 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 34, 22 |
Show alignments to all cow chromosomes.