Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050O08.5 |
| Conread position: | 1-386 |
| Cow position: | chr28:7758011-7758393 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 261, 0 |
| Conread position: | 3-349 |
| Cow position: | chr28:9290261-9290601 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 3-352 |
| Cow position: | chr28:7757425-7757770 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 259, 0 |
| Conread position: | 9-298 |
| Cow position: | chr28:9298582-9298868 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 9-327 |
| Cow position: | chr28:9299236-9299550 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 9-346 |
| Cow position: | chr28:7757767-7758100 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 9-349 |
| Cow position: | chr28:7810606-7810942 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 192, 201 |
| Conread position: | 17-347 |
| Cow position: | chr28:9253210-9253536 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 17-349 |
| Cow position: | chr28:7757859-7758187 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 17-354 |
| Cow position: | chr28:9298840-9299171 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 304, 150 |
| Conread position: | 18-226 |
| Cow position: | chr28:9290443-9290650 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 18-252 |
| Cow position: | chr28:7810288-7810522 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-330 |
| Cow position: | chr28:9253295-9253605 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 18-343 |
| Cow position: | chr28:9253043-9253364 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 271, 243 |
| Conread position: | 18-347 |
| Cow position: | chr28:7757944-7758269 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 268, 243 |
| Conread position: | 18-349 |
| Cow position: | chr28:7757608-7757935 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 271, 243 |
| Conread position: | 18-352 |
| Cow position: | chr28:7757692-7758022 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 271, 243 |
| Conread position: | 20-349 |
| Cow position: | chr28:9252961-9253286 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 241, 0 |
| Conread position: | 29-297 |
| Cow position: | chr28:11333850-11333583 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 38-247 |
| Cow position: | chr28:9290132-9290337 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 38-335 |
| Cow position: | chr28:7758452-7758747 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 57-349 |
| Cow position: | chr28:7758387-7758675 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 59-343 |
| Cow position: | chr28:7757397-7757677 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 59-349 |
| Cow position: | chr28:9290400-9290685 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 69-292 |
| Cow position: | chr28:34696323-34696545 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 95-349 |
| Cow position: | chr28:7810281-7810531 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 166, 0 |
Show alignments to all cow chromosomes.