Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8050O08.5
        

               Conread position:
               3-349
               

               Cow position:
               chr6:49340413-49340755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               308, 259
               

               Conread position:
               3-349
               

               Cow position:
               chr6:49340917-49341259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               259, 0
               

               Conread position:
               9-349
               

               Cow position:
               chr6:49341091-49341427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               294, 253
               

               Conread position:
               17-279
               

               Cow position:
               chr6:49341015-49341276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               244, 0
               

               Conread position:
               17-297
               

               Cow position:
               chr6:49396232-49396511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               242, 0
               

               Conread position:
               17-349
               

               Cow position:
               chr6:49340595-49340923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               114, 107
               

               Conread position:
               18-349
               

               Cow position:
               chr6:49340764-49341091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               102, 113
               

               Conread position:
               43-347
               

               Cow position:
               chr6:49340874-49341173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               62-341
               

               Cow position:
               chr6:49340388-49340663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               197, 0
               
Show alignments to all cow chromosomes.