Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050O08.5 |
| Conread position: | 1-307 |
| Cow position: | chr7:18390337-18390641 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 282, 261 |
| Conread position: | 1-343 |
| Cow position: | chr7:42879101-42878763 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 261, 0 |
| Conread position: | 1-349 |
| Cow position: | chr7:3180208-3180552 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 312, 260 |
| Conread position: | 1-349 |
| Cow position: | chr7:42878933-42878589 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 9-342 |
| Cow position: | chr7:1014288-1014617 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 9-343 |
| Cow position: | chr7:3179712-3180042 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 132, 112 |
| Conread position: | 17-199 |
| Cow position: | chr7:1440081-1440263 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 17-336 |
| Cow position: | chr7:3180140-3180459 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 17-349 |
| Cow position: | chr7:1015046-1015374 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 295, 245 |
| Conread position: | 18-329 |
| Cow position: | chr7:11600743-11600436 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 18-343 |
| Cow position: | chr7:42878664-42878343 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 272, 240 |
| Conread position: | 18-347 |
| Cow position: | chr7:42879168-42878843 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 271, 243 |
| Conread position: | 18-349 |
| Cow position: | chr7:3180393-3180720 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 18-349 |
| Cow position: | chr7:42879000-42878673 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 36-349 |
| Cow position: | chr7:1439933-1440241 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 51-252 |
| Cow position: | chr7:1014996-1015197 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-336 |
| Cow position: | chr7:3179922-3180207 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 237, 210 |
| Conread position: | 52-349 |
| Cow position: | chr7:1014746-1015038 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 53-336 |
| Cow position: | chr7:1014914-1015197 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 150, 155 |
| Conread position: | 56-293 |
| Cow position: | chr7:1440036-1440272 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 56-297 |
| Cow position: | chr7:1015253-1015495 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 57-346 |
| Cow position: | chr7:3180012-3180297 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 226, 204 |
| Conread position: | 57-349 |
| Cow position: | chr7:3179844-3180132 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 75-349 |
| Cow position: | chr7:42879277-42879009 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 215, 25 |
Show alignments to all cow chromosomes.