Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050O08.5 |
| Conread position: | 1-343 |
| Cow position: | chr8:45201193-45201531 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 260, 0 |
| Conread position: | 3-335 |
| Cow position: | chr8:45201027-45201357 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 221, 210 |
| Conread position: | 9-284 |
| Cow position: | chr8:55581173-55581447 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 13-349 |
| Cow position: | chr8:45201121-45201453 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 17-339 |
| Cow position: | chr8:45201629-45201948 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 175, 180 |
| Conread position: | 17-343 |
| Cow position: | chr8:46816068-46816390 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 17-349 |
| Cow position: | chr8:55581265-55581593 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 18-296 |
| Cow position: | chr8:55581014-55581291 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-297 |
| Cow position: | chr8:46816657-46816935 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-297 |
| Cow position: | chr8:46816909-46817187 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 18-297 |
| Cow position: | chr8:46817077-46817355 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-335 |
| Cow position: | chr8:48407270-48406955 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 312, 236 |
| Conread position: | 18-343 |
| Cow position: | chr8:45201546-45201867 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-343 |
| Cow position: | chr8:46816489-46816810 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 18-343 |
| Cow position: | chr8:55581098-55581419 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 18-349 |
| Cow position: | chr8:45201378-45201705 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 269, 243 |
| Conread position: | 18-349 |
| Cow position: | chr8:46816153-46816480 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 0 |
| Conread position: | 18-349 |
| Cow position: | chr8:46816405-46816732 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 240, 0 |
| Conread position: | 18-349 |
| Cow position: | chr8:46816573-46816900 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 269, 241 |
| Conread position: | 18-349 |
| Cow position: | chr8:46816825-46817152 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 110, 101 |
| Conread position: | 18-349 |
| Cow position: | chr8:46816993-46817320 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 274, 244 |
| Conread position: | 18-349 |
| Cow position: | chr8:48407606-48407279 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 262, 244 |
| Conread position: | 18-349 |
| Cow position: | chr8:55580930-55581257 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 19-349 |
| Cow position: | chr8:46815899-46816228 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 61, 242 |
| Conread position: | 36-297 |
| Cow position: | chr8:46816003-46816263 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 49-349 |
| Cow position: | chr8:45200989-45201285 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 51-343 |
| Cow position: | chr8:48407489-48407201 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 52-286 |
| Cow position: | chr8:48407320-48407087 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 56-349 |
| Cow position: | chr8:48407148-48406859 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 57-245 |
| Cow position: | chr8:55581473-55581661 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-328 |
| Cow position: | chr8:55581389-55581656 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 204, 0 |
Show alignments to all cow chromosomes.