Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051A10.5 | 
| Conread position: | 5-552 | 
| Cow position: | chr3:11011370-11010823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 548 | 
| Alignm identity: | 467 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 213-530 | 
| Cow position: | chr3:11010769-11010455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 251, 0 | 
| Conread position: | 219-369 | 
| Cow position: | chr3:11009680-11009533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 219-531 | 
| Cow position: | chr3:11010436-11010139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 220-531 | 
| Cow position: | chr3:11010957-11010649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 54, 61 | 
| Conread position: | 226-497 | 
| Cow position: | chr3:11010306-11010047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 226-530 | 
| Cow position: | chr3:11010087-11009798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 231, 42 | 
| Conread position: | 226-531 | 
| Cow position: | chr3:11009805-11009503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 179, 0 | 
| Conread position: | 237-531 | 
| Cow position: | chr3:11010679-11010391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 201, 172 | 
| Conread position: | 243-545 | 
| Cow position: | chr3:11009917-11009618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 89 | 
Show alignments to all cow chromosomes.
