Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051E06.3 |
| Conread position: | 106-416 |
| Cow position: | chr13:22125463-22125772 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 106-416 |
| Cow position: | chr13:24163189-24163498 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 112-405 |
| Cow position: | chr13:24163278-24163571 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 163, 169 |
| Conread position: | 112-427 |
| Cow position: | chr13:22125048-22125363 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-427 |
| Cow position: | chr13:24162774-24163089 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-439 |
| Cow position: | chr13:24162690-24163019 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 133, 127 |
| Conread position: | 114-424 |
| Cow position: | chr13:56292161-56291850 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 300, 294 |
| Conread position: | 117-424 |
| Cow position: | chr13:24162611-24162918 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-314 |
| Cow position: | chr13:24163454-24163648 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 119 |
| Conread position: | 120-395 |
| Cow position: | chr13:22125140-22125415 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 95, 91 |
| Conread position: | 120-395 |
| Cow position: | chr13:24162866-24163141 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 91 |
| Conread position: | 120-422 |
| Cow position: | chr13:24163118-24163420 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 155, 161 |
| Conread position: | 121-433 |
| Cow position: | chr13:39930692-39931003 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 90 |
| Conread position: | 121-433 |
| Cow position: | chr13:39930776-39931087 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 90 |
| Conread position: | 121-435 |
| Cow position: | chr13:22124721-22125035 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-435 |
| Cow position: | chr13:39930860-39931172 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 90 |
| Conread position: | 121-439 |
| Cow position: | chr13:22124973-22125293 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 124, 118 |
| Conread position: | 123-433 |
| Cow position: | chr13:39930610-39930919 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 88 |
| Conread position: | 129-435 |
| Cow position: | chr13:24162455-24162761 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-416 |
| Cow position: | chr13:22125234-22125520 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-416 |
| Cow position: | chr13:24162960-24163246 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-424 |
| Cow position: | chr13:22124898-22125192 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-417 |
| Cow position: | chr13:56292052-56291773 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 186, 259 |
| Conread position: | 139-424 |
| Cow position: | chr13:39984382-39984667 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 139-424 |
| Cow position: | chr13:39984466-39984751 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 151-412 |
| Cow position: | chr13:22125423-22125683 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 124, 130 |
| Conread position: | 151-416 |
| Cow position: | chr13:22124835-22125100 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 124, 130 |
| Conread position: | 151-416 |
| Cow position: | chr13:24162561-24162826 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 124, 130 |
| Conread position: | 157-424 |
| Cow position: | chr13:39984316-39984583 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-433 |
| Cow position: | chr13:39930584-39930835 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 244, 0 |
Show alignments to all cow chromosomes.