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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8051E06.3
        

               
Conread position:
               
85-418
               

               
Cow position:
               
chr18:50281937-50282271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
101-417
               

               
Cow position:
               
chr18:40324351-40324038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
107-416
               

               
Cow position:
               
chr18:42693761-42693453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
108-326
               

               
Cow position:
               
chr18:56329060-56328841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
108-406
               

               
Cow position:
               
chr18:53525812-53526109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
172, 11
               

               
Conread position:
               
108-415
               

               
Cow position:
               
chr18:56316588-56316895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
108-421
               

               
Cow position:
               
chr18:43168247-43168558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
300, 0
               

               
Conread position:
               
108-423
               

               
Cow position:
               
chr18:43167995-43168310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
97, 82
               

               
Conread position:
               
108-427
               

               
Cow position:
               
chr18:42792427-42792746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
305, 300
               

               
Conread position:
               
109-360
               

               
Cow position:
               
chr18:55018000-55018251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
117, 102
               

               
Conread position:
               
109-365
               

               
Cow position:
               
chr18:55008931-55009187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
109-366
               

               
Cow position:
               
chr18:40075311-40075568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 90
               

               
Conread position:
               
109-383
               

               
Cow position:
               
chr18:54993192-54993466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
109-417
               

               
Cow position:
               
chr18:40075060-40075365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
109-417
               

               
Cow position:
               
chr18:54980100-54980406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
100, 86
               

               
Conread position:
               
109-417
               

               
Cow position:
               
chr18:54992940-54993246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
109-427
               

               
Cow position:
               
chr18:42792176-42792494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 299
               

               
Conread position:
               
110-366
               

               
Cow position:
               
chr18:43093045-43092790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
221, 0
               

               
Conread position:
               
110-367
               

               
Cow position:
               
chr18:43093297-43093040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-375
               

               
Cow position:
               
chr18:50058830-50058565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-385
               

               
Cow position:
               
chr18:50022366-50022091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-404
               

               
Cow position:
               
chr18:1417955-1418249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-404
               

               
Cow position:
               
chr18:50058662-50058370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
197, 157
               

               
Conread position:
               
110-405
               

               
Cow position:
               
chr18:42693842-42693548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
165, 11
               

               
Conread position:
               
110-406
               

               
Cow position:
               
chr18:49032925-49032629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
277, 281
               

               
Conread position:
               
110-406
               

               
Cow position:
               
chr18:50281880-50282175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
110-406
               

               
Cow position:
               
chr18:55067073-55066777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
110-416
               

               
Cow position:
               
chr18:50848709-50849014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
110-417
               

               
Cow position:
               
chr18:55066989-55066684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
98, 103
               

               
Conread position:
               
110-418
               

               
Cow position:
               
chr18:40306710-40307018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
110-418
               

               
Cow position:
               
chr18:50271498-50271806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
110-418
               

               
Cow position:
               
chr18:50271667-50271974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 14
               

               
Conread position:
               
110-418
               

               
Cow position:
               
chr18:55497669-55497361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
105, 101
               

               
Conread position:
               
110-423
               

               
Cow position:
               
chr18:50848456-50848769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-424
               

               
Cow position:
               
chr18:41197948-41198262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-424
               

               
Cow position:
               
chr18:41949058-41948745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
110-424
               

               
Cow position:
               
chr18:43093381-43093067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
166, 178
               

               
Conread position:
               
110-424
               

               
Cow position:
               
chr18:43093464-43093151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
303, 19
               

               
Conread position:
               
110-424
               

               
Cow position:
               
chr18:44397898-44397584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
110-424
               

               
Cow position:
               
chr18:50083403-50083717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
164, 176
               

               
Conread position:
               
110-425
               

               
Cow position:
               
chr18:50021775-50021457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
110-425
               

               
Cow position:
               
chr18:50083908-50084222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 21
               

               
Conread position:
               
110-427
               

               
Cow position:
               
chr18:40306458-40306775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
277, 281
               

               
Conread position:
               
110-427
               

               
Cow position:
               
chr18:49032757-49032440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
278, 282
               

               
Conread position:
               
110-427
               

               
Cow position:
               
chr18:50048766-50048449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
303, 298
               

               
Conread position:
               
110-427
               

               
Cow position:
               
chr18:50059670-50059353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 298
               

               
Conread position:
               
110-427
               

               
Cow position:
               
chr18:50295478-50295794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
110-441
               

               
Cow position:
               
chr18:42693674-42693344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
111-418
               

               
Cow position:
               
chr18:50059164-50058858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
166, 5
               

               
Conread position:
               
111-424
               

               
Cow position:
               
chr18:43168167-43168479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
112-363
               

               
Cow position:
               
chr18:53609924-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
191, 202
               

               
Conread position:
               
112-384
               

               
Cow position:
               
chr18:56128916-56129187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
191, 202
               

               
Conread position:
               
112-385
               

               
Cow position:
               
chr18:53635249-53634977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
191, 195
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr18:53509277-53509559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
112-398
               

               
Cow position:
               
chr18:50295395-50295681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-403
               

               
Cow position:
               
chr18:50048848-50048558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
97, 89
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr18:42792263-42792555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
266, 255
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr18:43093127-43092835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-405
               

               
Cow position:
               
chr18:50282049-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
165, 174
               

               
Conread position:
               
112-406
               

               
Cow position:
               
chr18:56329308-56329014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-413
               

               
Cow position:
               
chr18:42827611-42827911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
112-415
               

               
Cow position:
               
chr18:50059584-50059283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
296, 0
               

               
Conread position:
               
112-416
               

               
Cow position:
               
chr18:53610176-53609872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
105, 99
               

               
Conread position:
               
112-416
               

               
Cow position:
               
chr18:56316340-56316644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 82
               

               
Conread position:
               
112-417
               

               
Cow position:
               
chr18:1418125-1418428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
296, 0
               

               
Conread position:
               
112-417
               

               
Cow position:
               
chr18:42791339-42791644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
183, 192
               

               
Conread position:
               
112-417
               

               
Cow position:
               
chr18:42791759-42792064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 15
               

               
Conread position:
               
112-417
               

               
Cow position:
               
chr18:50246116-50246421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-417
               

               
Cow position:
               
chr18:50848626-50848929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
150, 156
               

               
Conread position:
               
112-418
               

               
Cow position:
               
chr18:1418293-1418599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-418
               

               
Cow position:
               
chr18:50058744-50058440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
301, 240
               

               
Conread position:
               
112-418
               

               
Cow position:
               
chr18:50083993-50084302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
112-418
               

               
Cow position:
               
chr18:50099098-50099404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-418
               

               
Cow position:
               
chr18:50271836-50272142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 187
               

               
Conread position:
               
112-422
               

               
Cow position:
               
chr18:50030692-50030382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
92, 175
               

               
Conread position:
               
112-423
               

               
Cow position:
               
chr18:41198118-41198429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:40306628-40306940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
162, 187
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:42791843-42792155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:42792347-42792659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
163, 180
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:50021857-50021542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
116, 299
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:50083657-50083969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:50848542-50848854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
234, 240
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:50848962-50849274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:53525731-53526043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:53635501-53635189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
105, 99
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr18:56128664-56128976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
163, 177
               

               
Conread position:
               
112-425
               

               
Cow position:
               
chr18:42827527-42827840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
198, 223
               

               
Conread position:
               
112-425
               

               
Cow position:
               
chr18:50031027-50030715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
112-425
               

               
Cow position:
               
chr18:50058912-50058599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 296
               

               
Conread position:
               
112-425
               

               
Cow position:
               
chr18:53610344-53610031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-427
               

               
Cow position:
               
chr18:1418041-1418356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 129
               

               
Conread position:
               
112-427
               

               
Cow position:
               
chr18:42791003-42791318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
163, 179
               

               
Conread position:
               
112-427
               

               
Cow position:
               
chr18:49032839-49032524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
191, 197
               

               
Conread position:
               
112-427
               

               
Cow position:
               
chr18:49033091-49032776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
275, 280
               

               
Conread position:
               
112-427
               

               
Cow position:
               
chr18:53635921-53635606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
112-427
               

               
Cow position:
               
chr18:56128244-56128559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-427
               

               
Cow position:
               
chr18:56329728-56329413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
301, 296
               

               
Conread position:
               
112-431
               

               
Cow position:
               
chr18:42791255-42791576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 99
               

               
Conread position:
               
112-438
               

               
Cow position:
               
chr18:50281797-50282125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
296, 0
               

               
Conread position:
               
112-456
               

               
Cow position:
               
chr18:50022112-50021761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
114-423
               

               
Cow position:
               
chr18:49033005-49032696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
115-323
               

               
Cow position:
               
chr18:50246623-50246831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
115-373
               

               
Cow position:
               
chr18:50271923-50272181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 91
               

               
Conread position:
               
115-407
               

               
Cow position:
               
chr18:56391139-56390845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 279
               

               
Conread position:
               
116-415
               

               
Cow position:
               
chr18:50848882-50849181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-424
               

               
Cow position:
               
chr18:50848210-50848518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 93
               

               
Conread position:
               
116-424
               

               
Cow position:
               
chr18:55523603-55523911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
77, 96
               

               
Conread position:
               
116-435
               

               
Cow position:
               
chr18:42694005-42693686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
297, 291
               

               
Conread position:
               
117-360
               

               
Cow position:
               
chr18:54979604-54979847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-375
               

               
Cow position:
               
chr18:53586283-53586026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 86
               

               
Conread position:
               
117-404
               

               
Cow position:
               
chr18:55066898-55066611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
118-416
               

               
Cow position:
               
chr18:56316094-56316392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
118-417
               

               
Cow position:
               
chr18:40306382-40306679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
185, 189
               

               
Conread position:
               
119-406
               

               
Cow position:
               
chr18:53509368-53509655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
161, 176
               

               
Conread position:
               
119-423
               

               
Cow position:
               
chr18:42792522-42792826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-423
               

               
Cow position:
               
chr18:43093624-43093320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
294, 289
               

               
Conread position:
               
120-365
               

               
Cow position:
               
chr18:40324165-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
218, 0
               

               
Conread position:
               
120-386
               

               
Cow position:
               
chr18:53560561-53560823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 89
               

               
Conread position:
               
120-406
               

               
Cow position:
               
chr18:42791935-42792221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-417
               

               
Cow position:
               
chr18:50295571-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-427
               

               
Cow position:
               
chr18:50849054-50849361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
293, 288
               

               
Conread position:
               
120-427
               

               
Cow position:
               
chr18:53560309-53560616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-427
               

               
Cow position:
               
chr18:53635661-53635354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-427
               

               
Cow position:
               
chr18:56128504-56128811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-447
               

               
Cow position:
               
chr18:50848802-50849133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 267
               

               
Conread position:
               
121-374
               

               
Cow position:
               
chr18:50021677-50021424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
178, 162
               

               
Conread position:
               
121-399
               

               
Cow position:
               
chr18:42693496-42693219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
150, 163
               

               
Conread position:
               
121-406
               

               
Cow position:
               
chr18:53586615-53586330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 102
               

               
Conread position:
               
121-417
               

               
Cow position:
               
chr18:42693580-42693286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
155, 163
               

               
Conread position:
               
121-417
               

               
Cow position:
               
chr18:43168092-43168388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 287
               

               
Conread position:
               
121-417
               

               
Cow position:
               
chr18:50246545-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
290, 0
               

               
Conread position:
               
121-418
               

               
Cow position:
               
chr18:50048587-50048295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
252, 0
               

               
Conread position:
               
121-418
               

               
Cow position:
               
chr18:50281722-50282019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
121-423
               

               
Cow position:
               
chr18:43093538-43093236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
266, 271
               

               
Conread position:
               
121-423
               

               
Cow position:
               
chr18:43167840-43168142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-423
               

               
Cow position:
               
chr18:50058987-50058685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-424
               

               
Cow position:
               
chr18:42792608-42792911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-424
               

               
Cow position:
               
chr18:50022016-50021710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
273, 0
               

               
Conread position:
               
121-424
               

               
Cow position:
               
chr18:50099023-50099326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
121-425
               

               
Cow position:
               
chr18:50059407-50059103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-427
               

               
Cow position:
               
chr18:50059239-50058933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
121-456
               

               
Cow position:
               
chr18:50083330-50083669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
121-466
               

               
Cow position:
               
chr18:50083498-50083847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
298, 0
               

               
Conread position:
               
122-423
               

               
Cow position:
               
chr18:50059322-50059021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
291, 286
               

               
Conread position:
               
123-404
               

               
Cow position:
               
chr18:43022601-43022320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
123-404
               

               
Cow position:
               
chr18:53609997-53609716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
264, 269
               

               
Conread position:
               
123-456
               

               
Cow position:
               
chr18:43093701-43093367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
303, 19
               

               
Conread position:
               
124-344
               

               
Cow position:
               
chr18:49032323-49032103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
124-365
               

               
Cow position:
               
chr18:51400583-51400824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-404
               

               
Cow position:
               
chr18:43174885-43174605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
124-406
               

               
Cow position:
               
chr18:41948625-41948343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-406
               

               
Cow position:
               
chr18:49023033-49023315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
152, 161
               

               
Conread position:
               
124-417
               

               
Cow position:
               
chr18:56267409-56267116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-418
               

               
Cow position:
               
chr18:40324665-40324371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
124-418
               

               
Cow position:
               
chr18:41949297-41949003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
174, 164
               

               
Conread position:
               
124-418
               

               
Cow position:
               
chr18:43174969-43174675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-418
               

               
Cow position:
               
chr18:44184415-44184121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 159
               

               
Conread position:
               
124-418
               

               
Cow position:
               
chr18:51789590-51789296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
153, 161
               

               
Conread position:
               
124-418
               

               
Cow position:
               
chr18:51812749-51812455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-424
               

               
Cow position:
               
chr18:42837465-42837165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
124-424
               

               
Cow position:
               
chr18:44398388-44398088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
260, 267
               

               
Conread position:
               
124-424
               

               
Cow position:
               
chr18:49022865-49023165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
124-427
               

               
Cow position:
               
chr18:49033163-49032860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
263, 268
               

               
Conread position:
               
124-427
               

               
Cow position:
               
chr18:56316520-56316823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
125-404
               

               
Cow position:
               
chr18:41949380-41949101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
125-424
               

               
Cow position:
               
chr18:44397967-44397668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
137, 143
               

               
Conread position:
               
125-424
               

               
Cow position:
               
chr18:50099364-50099662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
88, 6
               

               
Conread position:
               
125-429
               

               
Cow position:
               
chr18:53526081-53526386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
295, 15
               

               
Conread position:
               
125-466
               

               
Cow position:
               
chr18:50099700-50100044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
174, 8
               

               
Conread position:
               
126-365
               

               
Cow position:
               
chr18:55018270-55018508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
127-423
               

               
Cow position:
               
chr18:50251056-50251349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
150, 90
               

               
Conread position:
               
128-394
               

               
Cow position:
               
chr18:53509713-53509979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-406
               

               
Cow position:
               
chr18:52012052-52011774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
128-435
               

               
Cow position:
               
chr18:52012304-52011997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
129-363
               

               
Cow position:
               
chr18:56494320-56494551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
129-372
               

               
Cow position:
               
chr18:43093194-43092951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
129-404
               

               
Cow position:
               
chr18:55066634-55066359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
129-404
               

               
Cow position:
               
chr18:56329123-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 180
               

               
Conread position:
               
129-412
               

               
Cow position:
               
chr18:56316693-56316976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-417
               

               
Cow position:
               
chr18:53586355-53586069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
129-417
               

               
Cow position:
               
chr18:55017936-55018222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
183, 169
               

               
Conread position:
               
129-417
               

               
Cow position:
               
chr18:55066802-55066516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 82
               

               
Conread position:
               
129-418
               

               
Cow position:
               
chr18:51368126-51367837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-418
               

               
Cow position:
               
chr18:53635316-53635028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
258, 263
               

               
Conread position:
               
129-419
               

               
Cow position:
               
chr18:56128849-56129138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
258, 263
               

               
Conread position:
               
129-423
               

               
Cow position:
               
chr18:42791608-42791902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
170, 165
               

               
Conread position:
               
129-423
               

               
Cow position:
               
chr18:54979448-54979742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
129-424
               

               
Cow position:
               
chr18:42985420-42985125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
129-425
               

               
Cow position:
               
chr18:56316441-56316737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 188
               

               
Conread position:
               
129-427
               

               
Cow position:
               
chr18:53610411-53610113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-427
               

               
Cow position:
               
chr18:53635568-53635270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-427
               

               
Cow position:
               
chr18:56128597-56128895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
252, 238
               

               
Conread position:
               
129-427
               

               
Cow position:
               
chr18:56329375-56329077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
129-441
               

               
Cow position:
               
chr18:56316189-56316500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
300, 0
               

               
Conread position:
               
130-332
               

               
Cow position:
               
chr18:50282151-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-340
               

               
Cow position:
               
chr18:55524121-55524331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-364
               

               
Cow position:
               
chr18:50100124-50100356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
130-365
               

               
Cow position:
               
chr18:43048587-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
130-366
               

               
Cow position:
               
chr18:52011882-52011646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
130-404
               

               
Cow position:
               
chr18:50100040-50100314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
241, 249
               

               
Conread position:
               
130-404
               

               
Cow position:
               
chr18:53560067-53560341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
130-406
               

               
Cow position:
               
chr18:53560487-53560763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
145, 177
               

               
Conread position:
               
130-406
               

               
Cow position:
               
chr18:56494069-56494345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
256, 261
               

               
Conread position:
               
130-407
               

               
Cow position:
               
chr18:49032401-49032124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-407
               

               
Cow position:
               
chr18:56433773-56434052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
130-407
               

               
Cow position:
               
chr18:56493901-56494178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-416
               

               
Cow position:
               
chr18:49032485-49032199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
173, 179
               

               
Conread position:
               
130-416
               

               
Cow position:
               
chr18:50022262-50021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
192, 281
               

               
Conread position:
               
130-416
               

               
Cow position:
               
chr18:52012218-52011932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
251, 242
               

               
Conread position:
               
130-416
               

               
Cow position:
               
chr18:53610242-53609956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
248, 238
               

               
Conread position:
               
130-416
               

               
Cow position:
               
chr18:56330130-56329844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
283, 278
               

               
Conread position:
               
130-417
               

               
Cow position:
               
chr18:49022955-49023242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
130-417
               

               
Cow position:
               
chr18:56494153-56494438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
172, 177
               

               
Conread position:
               
130-418
               

               
Cow position:
               
chr18:33064377-33064089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
167, 183
               

               
Conread position:
               
130-418
               

               
Cow position:
               
chr18:41198220-41198508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-418
               

               
Cow position:
               
chr18:50083843-50084131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 83
               

               
Conread position:
               
130-418
               

               
Cow position:
               
chr18:51400673-51400961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
173, 178
               

               
Conread position:
               
130-423
               

               
Cow position:
               
chr18:50099284-50099577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
130-423
               

               
Cow position:
               
chr18:50099620-50099913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-423
               

               
Cow position:
               
chr18:50251224-50251517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
130-423
               

               
Cow position:
               
chr18:50271770-50272063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-424
               

               
Cow position:
               
chr18:41197632-41197926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-424
               

               
Cow position:
               
chr18:50099872-50100166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
180, 186
               

               
Conread position:
               
130-425
               

               
Cow position:
               
chr18:50048662-50048367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-427
               

               
Cow position:
               
chr18:50246386-50246683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
130-427
               

               
Cow position:
               
chr18:53560235-53560532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
243, 253
               

               
Conread position:
               
130-427
               

               
Cow position:
               
chr18:55523701-55523998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
194, 206
               

               
Conread position:
               
130-427
               

               
Cow position:
               
chr18:56329962-56329665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-435
               

               
Cow position:
               
chr18:52011966-52011661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 177
               

               
Conread position:
               
130-435
               

               
Cow position:
               
chr18:55497565-55497260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
247, 238
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr18:1418227-1418557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 0
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr18:42792029-42792359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
283, 278
               

               
Conread position:
               
130-462
               

               
Cow position:
               
chr18:50059062-50058726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
299, 0
               

               
Conread position:
               
131-341
               

               
Cow position:
               
chr18:55018695-55018903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
131-392
               

               
Cow position:
               
chr18:53560152-53560413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
131-415
               

               
Cow position:
               
chr18:49033240-49032958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 0
               

               
Conread position:
               
131-418
               

               
Cow position:
               
chr18:50099453-50099740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
143, 153
               

               
Conread position:
               
131-423
               

               
Cow position:
               
chr18:42791106-42791398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
282, 277
               

               
Conread position:
               
131-423
               

               
Cow position:
               
chr18:56128767-56129059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-424
               

               
Cow position:
               
chr18:40306815-40307108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-427
               

               
Cow position:
               
chr18:53559984-53560280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-427
               

               
Cow position:
               
chr18:53635398-53635102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-439
               

               
Cow position:
               
chr18:53610073-53609763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
132-423
               

               
Cow position:
               
chr18:49033323-49033032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-379
               

               
Cow position:
               
chr18:50849235-50849481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-427
               

               
Cow position:
               
chr18:33064626-33064332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
143, 162
               

               
Conread position:
               
133-427
               

               
Cow position:
               
chr18:41198055-41198349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-404
               

               
Cow position:
               
chr18:42674671-42674402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
134-404
               

               
Cow position:
               
chr18:50099792-50100062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-416
               

               
Cow position:
               
chr18:56128350-56128632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-417
               

               
Cow position:
               
chr18:42791193-42791474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
274, 0
               

               
Conread position:
               
134-417
               

               
Cow position:
               
chr18:55523454-55523734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 6
               

               
Conread position:
               
134-424
               

               
Cow position:
               
chr18:42675343-42675054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
169, 7
               

               
Conread position:
               
136-359
               

               
Cow position:
               
chr18:40324233-40324010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
136-417
               

               
Cow position:
               
chr18:42791699-42791978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
244, 256
               

               
Conread position:
               
136-424
               

               
Cow position:
               
chr18:44184487-44184199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
244, 223
               

               
Conread position:
               
138-418
               

               
Cow position:
               
chr18:52447929-52448209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
136, 146
               

               
Conread position:
               
138-427
               

               
Cow position:
               
chr18:49022795-49023084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
138-427
               

               
Cow position:
               
chr18:56128438-56128727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-359
               

               
Cow position:
               
chr18:42675003-42674783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
139-359
               

               
Cow position:
               
chr18:43119753-43119533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-365
               

               
Cow position:
               
chr18:40075173-40075399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
139-365
               

               
Cow position:
               
chr18:54967854-54968078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 85
               

               
Conread position:
               
139-365
               

               
Cow position:
               
chr18:55018114-55018340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
139-365
               

               
Cow position:
               
chr18:56434363-56434589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-366
               

               
Cow position:
               
chr18:14453138-14452911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
162, 174
               

               
Conread position:
               
139-366
               

               
Cow position:
               
chr18:42674919-42674692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
156, 175
               

               
Conread position:
               
139-366
               

               
Cow position:
               
chr18:50099545-50099772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
139-371
               

               
Cow position:
               
chr18:53636062-53635830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-383
               

               
Cow position:
               
chr18:44397785-44397541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-385
               

               
Cow position:
               
chr18:55008793-55009039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
139-400
               

               
Cow position:
               
chr18:54992802-54993060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr18:42744147-42743882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
156, 175
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr18:51367613-51367348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-406
               

               
Cow position:
               
chr18:54980298-54980565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
139-406
               

               
Cow position:
               
chr18:54993642-54993909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
139-416
               

               
Cow position:
               
chr18:52012377-52012100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
248, 253
               

               
Conread position:
               
139-416
               

               
Cow position:
               
chr18:53635810-53635533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-417
               

               
Cow position:
               
chr18:42674751-42674475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
161, 168
               

               
Conread position:
               
139-417
               

               
Cow position:
               
chr18:44398121-44397845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
245, 252
               

               
Conread position:
               
139-417
               

               
Cow position:
               
chr18:55018450-55018726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
139-417
               

               
Cow position:
               
chr18:56128103-56128381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-417
               

               
Cow position:
               
chr18:56434195-56434471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
241, 234
               

               
Conread position:
               
139-417
               

               
Cow position:
               
chr18:56434279-56434555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
139-418
               

               
Cow position:
               
chr18:33064032-33063753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 145
               

               
Conread position:
               
139-418
               

               
Cow position:
               
chr18:41198481-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
139-418
               

               
Cow position:
               
chr18:42675171-42674892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
164, 174
               

               
Conread position:
               
139-418
               

               
Cow position:
               
chr18:51752101-51751822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 145
               

               
Conread position:
               
139-418
               

               
Cow position:
               
chr18:51839243-51838964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 145
               

               
Conread position:
               
139-422
               

               
Cow position:
               
chr18:42744651-42744368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
139-423
               

               
Cow position:
               
chr18:41948778-41948494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
165, 175
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:14453222-14452937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:41948862-41948577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
274, 269
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:42675255-42674970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
245, 252
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:42744231-42743946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:42790946-42791231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:42792122-42792407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:42837786-42837501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:42985242-42984957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
159, 149
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:42985326-42985041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:43174786-43174501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
128, 124
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:44240243-44240528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:44398289-44398004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
164, 174
               

               
Conread position:
               
139-424
               

               
Cow position:
               
chr18:56247417-56247136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
185, 44
               

               
Conread position:
               
139-425
               

               
Cow position:
               
chr18:42837618-42837332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
235, 228
               

               
Conread position:
               
139-427
               

               
Cow position:
               
chr18:33064452-33064164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
139-427
               

               
Cow position:
               
chr18:33064536-33064248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
151, 144
               

               
Conread position:
               
139-427
               

               
Cow position:
               
chr18:33092956-33092668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
159, 145
               

               
Conread position:
               
139-427
               

               
Cow position:
               
chr18:42744483-42744195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
156, 170
               

               
Conread position:
               
139-427
               

               
Cow position:
               
chr18:42837702-42837414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
248, 253
               

               
Conread position:
               
139-427
               

               
Cow position:
               
chr18:53635726-53635438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-427
               

               
Cow position:
               
chr18:56329617-56329329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
248, 253
               

               
Conread position:
               
139-434
               

               
Cow position:
               
chr18:43048662-43048367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
144, 153
               

               
Conread position:
               
139-434
               

               
Cow position:
               
chr18:50030919-50030622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
139-438
               

               
Cow position:
               
chr18:50048989-50048688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
171, 181
               

               
Conread position:
               
139-452
               

               
Cow position:
               
chr18:42674835-42674517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
165, 170
               

               
Conread position:
               
142-434
               

               
Cow position:
               
chr18:56493998-56494289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
182, 6
               

               
Conread position:
               
143-427
               

               
Cow position:
               
chr18:53635974-53635690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
145-406
               

               
Cow position:
               
chr18:53498383-53498641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
226, 66
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr18:40307081-40307345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
169, 150
               

               
Conread position:
               
145-417
               

               
Cow position:
               
chr18:33064278-33064008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
263, 0
               

               
Conread position:
               
145-417
               

               
Cow position:
               
chr18:40074927-40075197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
194, 186
               

               
Conread position:
               
145-417
               

               
Cow position:
               
chr18:40306913-40307183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
263, 0
               

               
Conread position:
               
145-417
               

               
Cow position:
               
chr18:53586843-53586573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
145-417
               

               
Cow position:
               
chr18:55524052-55524322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 70
               

               
Conread position:
               
145-418
               

               
Cow position:
               
chr18:33064194-33063921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
134, 153
               

               
Conread position:
               
145-418
               

               
Cow position:
               
chr18:42744309-42744036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
145, 138
               

               
Conread position:
               
145-419
               

               
Cow position:
               
chr18:53559830-53560102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
145-423
               

               
Cow position:
               
chr18:33093118-33092840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
145-424
               

               
Cow position:
               
chr18:40324812-40324533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
158, 169
               

               
Conread position:
               
145-424
               

               
Cow position:
               
chr18:43048740-43048461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
145-427
               

               
Cow position:
               
chr18:40306325-40306607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
242, 246
               

               
Conread position:
               
145-427
               

               
Cow position:
               
chr18:56316289-56316571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
202, 208
               

               
Conread position:
               
145-427
               

               
Cow position:
               
chr18:56329527-56329245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 168
               

               
Conread position:
               
145-434
               

               
Cow position:
               
chr18:56316037-56316326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-322
               

               
Cow position:
               
chr18:56267303-56267127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-406
               

               
Cow position:
               
chr18:56329862-56329602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
241, 246
               

               
Conread position:
               
146-415
               

               
Cow position:
               
chr18:42827394-42827660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
146-422
               

               
Cow position:
               
chr18:56330030-56329754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-427
               

               
Cow position:
               
chr18:56329442-56329161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-434
               

               
Cow position:
               
chr18:56329190-56328902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
178, 186
               

               
Conread position:
               
147-371
               

               
Cow position:
               
chr18:40306243-40306467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
147-406
               

               
Cow position:
               
chr18:50246318-50246578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 149
               

               
Conread position:
               
147-406
               

               
Cow position:
               
chr18:56267470-56267211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
147-427
               

               
Cow position:
               
chr18:56128195-56128475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
176, 185
               

               
Conread position:
               
147-427
               

               
Cow position:
               
chr18:56493747-56494030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
88, 180
               

               
Conread position:
               
148-364
               

               
Cow position:
               
chr18:53586420-53586204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-398
               

               
Cow position:
               
chr18:56494255-56494502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
225, 0
               

               
Conread position:
               
148-407
               

               
Cow position:
               
chr18:53586504-53586245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
148-415
               

               
Cow position:
               
chr18:52447771-52448038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
148-417
               

               
Cow position:
               
chr18:22634883-22635150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 146
               

               
Conread position:
               
148-417
               

               
Cow position:
               
chr18:53559749-53560016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
108, 112
               

               
Conread position:
               
148-423
               

               
Cow position:
               
chr18:49032635-49032360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-423
               

               
Cow position:
               
chr18:52012116-52011841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-424
               

               
Cow position:
               
chr18:41197902-41198178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-424
               

               
Cow position:
               
chr18:42744558-42744282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
232, 243
               

               
Conread position:
               
148-424
               

               
Cow position:
               
chr18:49032551-49032275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
239, 243
               

               
Conread position:
               
148-427
               

               
Cow position:
               
chr18:41948937-41948658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 140
               

               
Conread position:
               
148-427
               

               
Cow position:
               
chr18:56329776-56329497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
239, 244
               

               
Conread position:
               
148-437
               

               
Cow position:
               
chr18:43094003-43093715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
281, 0
               

               
Conread position:
               
149-404
               

               
Cow position:
               
chr18:53509566-53509821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
149-417
               

               
Cow position:
               
chr18:53498129-53498401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
154, 265
               

               
Conread position:
               
149-417
               

               
Cow position:
               
chr18:53509650-53509916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
259, 0
               

               
Conread position:
               
149-417
               

               
Cow position:
               
chr18:55523552-55523818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 33
               

               
Conread position:
               
149-424
               

               
Cow position:
               
chr18:43175028-43174753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
153, 158
               

               
Conread position:
               
150-418
               

               
Cow position:
               
chr18:51400861-51401129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
151-365
               

               
Cow position:
               
chr18:54980058-54980271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
151-365
               

               
Cow position:
               
chr18:54993402-54993615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
151-366
               

               
Cow position:
               
chr18:54992898-54993113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
151-375
               

               
Cow position:
               
chr18:53560424-53560648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 64
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr18:50083780-50084035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr18:53509232-53509487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 133
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr18:53525686-53525941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
124, 134
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr18:53586753-53586498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
213, 241
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr18:56248165-56247910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr18:56391269-56391014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
236, 241
               

               
Conread position:
               
151-415
               

               
Cow position:
               
chr18:53586921-53586657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
151-415
               

               
Cow position:
               
chr18:55067116-55066852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
151-416
               

               
Cow position:
               
chr18:53610473-53610208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-416
               

               
Cow position:
               
chr18:55497460-55497195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
151-417
               

               
Cow position:
               
chr18:40075437-40075701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
146, 137
               

               
Conread position:
               
151-417
               

               
Cow position:
               
chr18:42724594-42724329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
151-417
               

               
Cow position:
               
chr18:50049145-50048879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
125, 156
               

               
Conread position:
               
151-417
               

               
Cow position:
               
chr18:50250996-50251259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
151-417
               

               
Cow position:
               
chr18:54980226-54980490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 147
               

               
Conread position:
               
151-417
               

               
Cow position:
               
chr18:55008889-55009153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
151-418
               

               
Cow position:
               
chr18:50099221-50099488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
136, 149
               

               
Conread position:
               
151-418
               

               
Cow position:
               
chr18:53498638-53498906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
151-423
               

               
Cow position:
               
chr18:50295266-50295538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 89
               

               
Conread position:
               
151-424
               

               
Cow position:
               
chr18:43167618-43167891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 78
               

               
Conread position:
               
151-424
               

               
Cow position:
               
chr18:44398025-44397752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 156
               

               
Conread position:
               
151-425
               

               
Cow position:
               
chr18:50048893-50048619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 88
               

               
Conread position:
               
151-427
               

               
Cow position:
               
chr18:50030823-50030542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
151-427
               

               
Cow position:
               
chr18:50246239-50246515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
232, 217
               

               
Conread position:
               
151-427
               

               
Cow position:
               
chr18:50848413-50848689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-479
               

               
Cow position:
               
chr18:50022409-50022076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
262, 257
               

               
Conread position:
               
152-417
               

               
Cow position:
               
chr18:50049060-50048797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
245, 0
               

               
Conread position:
               
152-417
               

               
Cow position:
               
chr18:54967783-54968044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
152-435
               

               
Cow position:
               
chr18:49022725-49023008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 114
               

               
Conread position:
               
153-375
               

               
Cow position:
               
chr18:50245989-50246211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
157-383
               

               
Cow position:
               
chr18:43167707-43167934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
157-406
               

               
Cow position:
               
chr18:50295356-50295605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
157-417
               

               
Cow position:
               
chr18:14454020-14453762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 150
               

               
Conread position:
               
157-417
               

               
Cow position:
               
chr18:50246077-50246337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
157-418
               

               
Cow position:
               
chr18:50031066-50030808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
221, 133
               

               
Conread position:
               
157-424
               

               
Cow position:
               
chr18:14453288-14453021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
157-424
               

               
Cow position:
               
chr18:56247480-56247218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
158-404
               

               
Cow position:
               
chr18:40075024-40075270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
97, 89
               

               
Conread position:
               
159-423
               

               
Cow position:
               
chr18:50271463-50271727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
97, 101
               

               
Conread position:
               
159-424
               

               
Cow position:
               
chr18:40324882-40324617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 155
               

               
Conread position:
               
159-424
               

               
Cow position:
               
chr18:50098977-50099242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
254, 249
               

               
Conread position:
               
159-427
               

               
Cow position:
               
chr18:56330185-56329917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
160-376
               

               
Cow position:
               
chr18:50250922-50251137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
160-378
               

               
Cow position:
               
chr18:50251170-50251389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 111
               

               
Conread position:
               
161-417
               

               
Cow position:
               
chr18:49033378-49033124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
247, 0
               

               
Conread position:
               
161-455
               

               
Cow position:
               
chr18:50281678-50281976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
174-424
               

               
Cow position:
               
chr18:1417935-1418185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
177, 172
               

               
Conread position:
               
175-416
               

               
Cow position:
               
chr18:50083300-50083541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
238, 233
               

               
Conread position:
               
175-416
               

               
Cow position:
               
chr18:56128055-56128296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
175-417
               

               
Cow position:
               
chr18:53586981-53586741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
175-423
               

               
Cow position:
               
chr18:53636110-53635862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
175-424
               

               
Cow position:
               
chr18:44398421-44398172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-423
               

               
Cow position:
               
chr18:50295212-50295454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-424
               

               
Cow position:
               
chr18:50848359-50848602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-423
               

               
Cow position:
               
chr18:42694187-42693950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
112, 101
               

               
Conread position:
               
223-417
               

               
Cow position:
               
chr18:56248175-56247985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               
Show alignments to all cow chromosomes.