Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051E06.3 |
| Conread position: | 105-427 |
| Cow position: | chr7:18390276-18390597 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 109-417 |
| Cow position: | chr7:3179731-3180036 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 268, 11 |
| Conread position: | 109-417 |
| Cow position: | chr7:18390447-18390755 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-424 |
| Cow position: | chr7:1439924-1440238 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 109-424 |
| Cow position: | chr7:11601070-11600755 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 189, 175 |
| Conread position: | 110-320 |
| Cow position: | chr7:42878486-42878276 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-378 |
| Cow position: | chr7:1440008-1440276 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-417 |
| Cow position: | chr7:3180403-3180708 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 102, 114 |
| Conread position: | 110-417 |
| Cow position: | chr7:3180571-3180877 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 267, 218 |
| Conread position: | 110-424 |
| Cow position: | chr7:1439504-1439820 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 181, 84 |
| Conread position: | 110-427 |
| Cow position: | chr7:1439842-1440157 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 112-299 |
| Cow position: | chr7:18390618-18390805 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-409 |
| Cow position: | chr7:42878568-42878271 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 212, 223 |
| Conread position: | 112-418 |
| Cow position: | chr7:42879072-42878766 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-423 |
| Cow position: | chr7:42878904-42878593 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 161, 171 |
| Conread position: | 112-424 |
| Cow position: | chr7:42878736-42878424 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 301, 296 |
| Conread position: | 112-424 |
| Cow position: | chr7:42878988-42878676 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-427 |
| Cow position: | chr7:42878652-42878337 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-406 |
| Cow position: | chr7:1015152-1015437 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 89, 84 |
| Conread position: | 121-417 |
| Cow position: | chr7:42878811-42878517 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 287, 0 |
| Conread position: | 121-424 |
| Cow position: | chr7:1438378-1438681 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 121-424 |
| Cow position: | chr7:42879231-42878928 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-271 |
| Cow position: | chr7:16643360-16643508 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-373 |
| Cow position: | chr7:18390546-18390795 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-417 |
| Cow position: | chr7:3180081-3180372 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 124-423 |
| Cow position: | chr7:3180165-3180464 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 180, 190 |
| Conread position: | 124-423 |
| Cow position: | chr7:3180249-3180548 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-423 |
| Cow position: | chr7:18390378-18390677 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-424 |
| Cow position: | chr7:3179997-3180297 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 151, 166 |
| Conread position: | 125-418 |
| Cow position: | chr7:3179914-3180207 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 129-424 |
| Cow position: | chr7:11600882-11600587 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 259, 239 |
| Conread position: | 129-427 |
| Cow position: | chr7:42879139-42878841 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-417 |
| Cow position: | chr7:1014993-1015278 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 220, 216 |
| Conread position: | 130-424 |
| Cow position: | chr7:1015077-1015371 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 126, 130 |
| Conread position: | 135-417 |
| Cow position: | chr7:18390137-18390417 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 127, 131 |
| Conread position: | 139-376 |
| Cow position: | chr7:1015254-1015492 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 205, 236 |
| Conread position: | 139-406 |
| Cow position: | chr7:1439787-1440052 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 139-423 |
| Cow position: | chr7:3180348-3180632 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 156, 178 |
| Conread position: | 139-427 |
| Cow position: | chr7:18390225-18390513 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 39, 43 |
| Conread position: | 145-365 |
| Cow position: | chr7:11600782-11600562 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-416 |
| Cow position: | chr7:11601118-11600847 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 147-422 |
| Cow position: | chr7:3180524-3180799 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-423 |
| Cow position: | chr7:1439458-1439736 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 236, 129 |
| Conread position: | 148-434 |
| Cow position: | chr7:1014927-1015213 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 63, 68 |
| Conread position: | 151-366 |
| Cow position: | chr7:8278007-8278222 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 58 |
| Conread position: | 151-424 |
| Cow position: | chr7:3179856-3180129 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 236, 241 |
| Conread position: | 160-417 |
| Cow position: | chr7:42879276-42879021 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 223-427 |
| Cow position: | chr7:8277911-8278115 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 225-406 |
| Cow position: | chr7:1439451-1439631 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 134, 0 |
Show alignments to all cow chromosomes.