Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051E06.3 |
| Conread position: | 108-385 |
| Cow position: | chr8:46817085-46817362 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-404 |
| Cow position: | chr8:55581191-55581486 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-417 |
| Cow position: | chr8:55581023-55581329 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 299, 0 |
| Conread position: | 109-418 |
| Cow position: | chr8:46816498-46816807 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 271, 280 |
| Conread position: | 109-423 |
| Cow position: | chr8:45201219-45201533 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-423 |
| Cow position: | chr8:45201303-45201617 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-423 |
| Cow position: | chr8:46816078-46816392 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-423 |
| Cow position: | chr8:46816750-46817064 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 110-423 |
| Cow position: | chr8:46816164-46816476 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 168, 9 |
| Conread position: | 110-425 |
| Cow position: | chr8:45201388-45201703 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 214, 222 |
| Conread position: | 112-417 |
| Cow position: | chr8:46816333-46816636 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 296, 0 |
| Conread position: | 112-417 |
| Cow position: | chr8:46816669-46816972 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 112-418 |
| Cow position: | chr8:46816921-46817227 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 113-416 |
| Cow position: | chr8:46815998-46816301 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 93, 87 |
| Conread position: | 117-418 |
| Cow position: | chr8:48407589-48407288 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 296, 291 |
| Conread position: | 118-423 |
| Cow position: | chr8:46817011-46817316 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-423 |
| Cow position: | chr8:48407504-48407199 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-424 |
| Cow position: | chr8:46816425-46816729 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-417 |
| Cow position: | chr8:45201063-45201357 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 121-418 |
| Cow position: | chr8:45201567-45201864 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-423 |
| Cow position: | chr8:45201147-45201449 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-423 |
| Cow position: | chr8:46816594-46816896 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 174, 184 |
| Conread position: | 121-424 |
| Cow position: | chr8:46816258-46816561 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-365 |
| Cow position: | chr8:48407414-48407173 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-365 |
| Cow position: | chr8:55581122-55581363 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-405 |
| Cow position: | chr8:55581458-55581739 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-418 |
| Cow position: | chr8:45200982-45201276 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 124-423 |
| Cow position: | chr8:55580954-55581253 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-418 |
| Cow position: | chr8:48407326-48407036 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 162 |
| Conread position: | 130-417 |
| Cow position: | chr8:55580876-55581161 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 257, 262 |
| Conread position: | 139-383 |
| Cow position: | chr8:45201669-45201913 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 135, 140 |
| Conread position: | 139-414 |
| Cow position: | chr8:55581389-55581666 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 266, 0 |
| Conread position: | 139-423 |
| Cow position: | chr8:45201501-45201785 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 274, 269 |
| Conread position: | 148-416 |
| Cow position: | chr8:48407054-48406786 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 155, 160 |
| Conread position: | 156-424 |
| Cow position: | chr8:46815958-46816225 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 162-418 |
| Cow position: | chr8:45200936-45201192 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 251, 246 |
| Conread position: | 175-417 |
| Cow position: | chr8:46815889-46816132 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 76, 236 |
| Conread position: | 175-423 |
| Cow position: | chr8:55580837-55581085 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 41 |
Show alignments to all cow chromosomes.