Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051E06.3 |
| Conread position: | 82-365 |
| Cow position: | chrX:29045736-29045455 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 84-417 |
| Cow position: | chrX:25325746-25325416 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 240, 39 |
| Conread position: | 109-408 |
| Cow position: | chrX:13826915-13826616 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 101, 107 |
| Conread position: | 109-423 |
| Cow position: | chrX:25309923-25310237 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 171, 190 |
| Conread position: | 110-281 |
| Cow position: | chrX:29045625-29045454 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-366 |
| Cow position: | chrX:13826746-13826490 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 100, 106 |
| Conread position: | 110-417 |
| Cow position: | chrX:25325553-25325248 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 166, 174 |
| Conread position: | 110-417 |
| Cow position: | chrX:29045142-29044837 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 298, 0 |
| Conread position: | 110-422 |
| Cow position: | chrX:25324545-25324233 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-424 |
| Cow position: | chrX:25309756-25310070 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 96 |
| Conread position: | 111-423 |
| Cow position: | chrX:25324795-25324484 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 112-417 |
| Cow position: | chrX:25324711-25324408 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 112-417 |
| Cow position: | chrX:25325383-25325080 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 97, 89 |
| Conread position: | 112-417 |
| Cow position: | chrX:25325467-25325164 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 187, 172 |
| Conread position: | 112-423 |
| Cow position: | chrX:25325299-25324988 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 183, 193 |
| Conread position: | 119-424 |
| Cow position: | chrX:25309848-25310154 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 273 |
| Conread position: | 121-352 |
| Cow position: | chrX:29044879-29044648 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-404 |
| Cow position: | chrX:25310019-25310302 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 154, 169 |
| Conread position: | 121-415 |
| Cow position: | chrX:29044963-29044671 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 287, 0 |
| Conread position: | 121-418 |
| Cow position: | chrX:25324870-25324573 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 121-424 |
| Cow position: | chrX:25324618-25324315 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 292, 287 |
| Conread position: | 121-424 |
| Cow position: | chrX:29045047-29044744 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 292, 287 |
| Conread position: | 126-417 |
| Cow position: | chrX:25310192-25310481 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 98 |
| Conread position: | 130-371 |
| Cow position: | chrX:13826474-13826233 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-417 |
| Cow position: | chrX:25325029-25324744 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 278, 0 |
| Conread position: | 130-438 |
| Cow position: | chrX:14181252-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 168, 154 |
| Conread position: | 139-424 |
| Cow position: | chrX:25325104-25324819 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-427 |
| Cow position: | chrX:29045197-29044909 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 274, 269 |
| Conread position: | 145-418 |
| Cow position: | chrX:29045758-29045485 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 268, 263 |
| Conread position: | 148-424 |
| Cow position: | chrX:14181318-14181042 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 151-417 |
| Cow position: | chrX:29045269-29045005 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 257, 0 |
| Conread position: | 151-424 |
| Cow position: | chrX:25309713-25309986 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 122, 139 |
| Conread position: | 151-424 |
| Cow position: | chrX:25310133-25310406 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 151-424 |
| Cow position: | chrX:25310301-25310574 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 233, 240 |
| Conread position: | 151-427 |
| Cow position: | chrX:13826537-13826261 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-424 |
| Cow position: | chrX:25325595-25325323 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 157-424 |
| Cow position: | chrX:29045830-29045563 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 52 |
| Conread position: | 160-427 |
| Cow position: | chrX:13826948-13826681 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 23 |
Show alignments to all cow chromosomes.