Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8051I23.5
        

               Conread position:
               1-161
               

               Cow position:
               chr17:15853670-15853832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 79
               

               Conread position:
               1-163
               

               Cow position:
               chr17:597892-597729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               140, 19
               

               Conread position:
               1-163
               

               Cow position:
               chr17:13936199-13936034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 83
               

               Conread position:
               1-167
               

               Cow position:
               chr17:6071471-6071640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 79
               

               Conread position:
               1-169
               

               Cow position:
               chr17:7560998-7560826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               1-169
               

               Cow position:
               chr17:22106699-22106529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               142, 135
               

               Conread position:
               1-170
               

               Cow position:
               chr17:147858-148030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr17:18198290-18198461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               1-171
               

               Cow position:
               chr17:2151116-2151287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               71, 78
               

               Conread position:
               1-175
               

               Cow position:
               chr17:29950151-29950327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               80, 66
               

               Conread position:
               1-180
               

               Cow position:
               chr17:13910675-13910491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 136
               

               Conread position:
               1-181
               

               Cow position:
               chr17:138549-138726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 11
               

               Conread position:
               1-181
               

               Cow position:
               chr17:2078581-2078759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               131, 67
               

               Conread position:
               1-181
               

               Cow position:
               chr17:5546349-5546166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               142, 135
               

               Conread position:
               1-181
               

               Cow position:
               chr17:6262792-6262974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 79
               

               Conread position:
               1-181
               

               Cow position:
               chr17:8204874-8205064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr17:11084199-11084017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               74, 82
               

               Conread position:
               1-181
               

               Cow position:
               chr17:13930834-13931013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr17:14029409-14029228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 75
               

               Conread position:
               1-181
               

               Cow position:
               chr17:14242766-14242944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               142, 67
               

               Conread position:
               1-181
               

               Cow position:
               chr17:15328217-15328399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr17:15350983-15351163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               142, 135
               

               Conread position:
               1-181
               

               Cow position:
               chr17:20209948-20209763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               60, 7
               

               Conread position:
               1-181
               

               Cow position:
               chr17:24027047-24026865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 82
               

               Conread position:
               1-181
               

               Cow position:
               chr17:40810687-40810869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 79
               

               Conread position:
               1-190
               

               Cow position:
               chr17:9752726-9752917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               1-190
               

               Cow position:
               chr17:20055073-20055254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               140, 62
               

               Conread position:
               2-130
               

               Cow position:
               chr17:27978048-27978176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-141
               

               Cow position:
               chr17:18721941-18721803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               2-161
               

               Cow position:
               chr17:14240006-14240167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-174
               

               Cow position:
               chr17:5043656-5043482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               2-174
               

               Cow position:
               chr17:16464020-16464193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               141, 132
               

               Conread position:
               2-175
               

               Cow position:
               chr17:18777893-18777718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-176
               

               Cow position:
               chr17:8211998-8212174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               139, 134
               

               Conread position:
               2-176
               

               Cow position:
               chr17:17127944-17128118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               141, 13
               

               Conread position:
               2-176
               

               Cow position:
               chr17:37529035-37528859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-179
               

               Cow position:
               chr17:19215457-19215279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 76
               

               Conread position:
               2-181
               

               Cow position:
               chr17:184084-184265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:1569279-1569095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 136
               

               Conread position:
               2-181
               

               Cow position:
               chr17:4210866-4211048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               2-181
               

               Cow position:
               chr17:4480945-4480764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:5638952-5638771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:5672580-5672399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:6122720-6122901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:14006364-14006545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               139, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:14250175-14249990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               78, 8
               

               Conread position:
               2-181
               

               Cow position:
               chr17:14932930-14932749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               2-181
               

               Cow position:
               chr17:15140401-15140221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               141, 20
               

               Conread position:
               2-181
               

               Cow position:
               chr17:15229095-15228917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               138, 38
               

               Conread position:
               2-181
               

               Cow position:
               chr17:15438730-15438909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               141, 75
               

               Conread position:
               2-181
               

               Cow position:
               chr17:15808924-15809105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:20215028-20215201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               2-181
               

               Cow position:
               chr17:20546074-20546255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:21766834-21767015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:21770617-21770798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               139, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:22249314-22249134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 15
               

               Conread position:
               2-181
               

               Cow position:
               chr17:23321479-23321301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               81, 72
               

               Conread position:
               2-181
               

               Cow position:
               chr17:24785127-24785308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:26829807-26829626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:29825024-29824843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:34236314-34236133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-181
               

               Cow position:
               chr17:43471653-43471473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               141, 117
               

               Conread position:
               2-181
               

               Cow position:
               chr17:43991426-43991606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               68, 76
               

               Conread position:
               2-190
               

               Cow position:
               chr17:1654826-1654635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               2-193
               

               Cow position:
               chr17:43231231-43231038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               141, 134
               

               Conread position:
               2-194
               

               Cow position:
               chr17:18200675-18200867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               141, 101
               

               Conread position:
               2-204
               

               Cow position:
               chr17:2698490-2698696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               2-432
               

               Cow position:
               chr17:11785821-11786250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               3-159
               

               Cow position:
               chr17:8068291-8068135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               138, 43
               

               Conread position:
               3-181
               

               Cow position:
               chr17:1311824-1311644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               138, 133
               

               Conread position:
               3-181
               

               Cow position:
               chr17:31232617-31232795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               140, 73
               

               Conread position:
               4-145
               

               Cow position:
               chr17:38917089-38916949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               4-181
               

               Cow position:
               chr17:1970090-1970269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               139, 132
               

               Conread position:
               4-181
               

               Cow position:
               chr17:5806550-5806371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               139, 132
               

               Conread position:
               4-181
               

               Cow position:
               chr17:6611961-6612140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               139, 132
               

               Conread position:
               4-181
               

               Cow position:
               chr17:8222644-8222823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               68, 76
               

               Conread position:
               4-181
               

               Cow position:
               chr17:15325297-15325118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               139, 132
               

               Conread position:
               4-181
               

               Cow position:
               chr17:15709054-15708875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               137, 132
               

               Conread position:
               4-181
               

               Cow position:
               chr17:18100135-18099956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               139, 132
               

               Conread position:
               4-181
               

               Cow position:
               chr17:20390713-20390892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               139, 132
               

               Conread position:
               4-181
               

               Cow position:
               chr17:30182641-30182462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               139, 132
               

               Conread position:
               4-181
               

               Cow position:
               chr17:44641531-44641352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               139, 132
               

               Conread position:
               4-183
               

               Cow position:
               chr17:1784601-1784421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               136, 64
               

               Conread position:
               4-183
               

               Cow position:
               chr17:22233346-22233165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               5-181
               

               Cow position:
               chr17:14865444-14865266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               138, 131
               

               Conread position:
               6-174
               

               Cow position:
               chr17:16855156-16854986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 77
               

               Conread position:
               10-181
               

               Cow position:
               chr17:2176925-2177098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 73
               

               Conread position:
               14-181
               

               Cow position:
               chr17:15128335-15128504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 122
               

               Conread position:
               14-181
               

               Cow position:
               chr17:20695156-20695325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 123
               

               Conread position:
               20-181
               

               Cow position:
               chr17:16903540-16903702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               21-181
               

               Cow position:
               chr17:4635819-4635657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               122, 113
               

               Conread position:
               22-181
               

               Cow position:
               chr17:37415931-37415770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               153-651
               

               Cow position:
               chr17:22237554-22238058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               325
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               180-760
               

               Cow position:
               chr17:16417048-16416469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 56
               

               Conread position:
               186-761
               

               Cow position:
               chr17:38991787-38992375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               188-761
               

               Cow position:
               chr17:8449750-8450333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               188-761
               

               Cow position:
               chr17:13936098-13935545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               590
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               189-511
               

               Cow position:
               chr17:20055164-20055480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               39, 92
               

               Conread position:
               189-590
               

               Cow position:
               chr17:41243158-41243564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               269
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               189-740
               

               Cow position:
               chr17:18100037-18099475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               189-761
               

               Cow position:
               chr17:241339-241906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 63
               

               Conread position:
               189-761
               

               Cow position:
               chr17:20209844-20209251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 141
               

               Conread position:
               189-761
               

               Cow position:
               chr17:37415851-37415295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               189-768
               

               Cow position:
               chr17:17957634-17958228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               601
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               189-768
               

               Cow position:
               chr17:29824924-29824328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               602
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               190-372
               

               Cow position:
               chr17:11024941-11025125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               190-472
               

               Cow position:
               chr17:5043555-5043270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               38, 151
               

               Conread position:
               190-491
               

               Cow position:
               chr17:21304326-21304630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 161
               

               Conread position:
               190-547
               

               Cow position:
               chr17:23041613-23041980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               38, 73
               

               Conread position:
               190-560
               

               Cow position:
               chr17:17128043-17128423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-561
               

               Cow position:
               chr17:21770718-21771100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-563
               

               Cow position:
               chr17:19369482-19369863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               34, 104
               

               Conread position:
               190-571
               

               Cow position:
               chr17:18242036-18242396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               190-574
               

               Cow position:
               chr17:4608326-4608713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               190-590
               

               Cow position:
               chr17:4635737-4635342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               190-592
               

               Cow position:
               chr17:14029308-14028896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               190-603
               

               Cow position:
               chr17:37528934-37528510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-607
               

               Cow position:
               chr17:43443451-43443024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 179
               

               Conread position:
               190-626
               

               Cow position:
               chr17:29079417-29079828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 67
               

               Conread position:
               190-634
               

               Cow position:
               chr17:14250070-14249615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               40, 30
               

               Conread position:
               190-651
               

               Cow position:
               chr17:15853772-15854246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-651
               

               Cow position:
               chr17:24785228-24785703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-675
               

               Cow position:
               chr17:23338011-23337522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 182
               

               Conread position:
               190-681
               

               Cow position:
               chr17:25739334-25739839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-705
               

               Cow position:
               chr17:2151218-2151711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               190-715
               

               Cow position:
               chr17:13910570-13910050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-736
               

               Cow position:
               chr17:9752828-9753370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               563
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 120
               

               Conread position:
               190-739
               

               Cow position:
               chr17:147960-148509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 66
               

               Conread position:
               190-739
               

               Cow position:
               chr17:2177018-2177574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               562
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 179
               

               Conread position:
               190-739
               

               Cow position:
               chr17:21666042-21666600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-739
               

               Cow position:
               chr17:40282052-40282598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 34
               

               Conread position:
               190-740
               

               Cow position:
               chr17:51061-50512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-740
               

               Cow position:
               chr17:2078681-2079230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               563
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 147
               

               Conread position:
               190-740
               

               Cow position:
               chr17:11084097-11083538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-740
               

               Cow position:
               chr17:20094119-20093567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 126
               

               Conread position:
               190-740
               

               Cow position:
               chr17:22233247-22232698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 84
               

               Conread position:
               190-740
               

               Cow position:
               chr17:40810789-40811318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-750
               

               Cow position:
               chr17:5672479-5671908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-757
               

               Cow position:
               chr17:3305613-3306203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               594
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 180
               

               Conread position:
               190-758
               

               Cow position:
               chr17:18591460-18592020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               190-758
               

               Cow position:
               chr17:20084775-20084212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 169
               

               Conread position:
               190-759
               

               Cow position:
               chr17:6262894-6263475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-759
               

               Cow position:
               chr17:8222743-8223324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-759
               

               Cow position:
               chr17:15328319-15328899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 179
               

               Conread position:
               190-761
               

               Cow position:
               chr17:158325-158896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 156
               

               Conread position:
               190-761
               

               Cow position:
               chr17:1569176-1568597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               190-761
               

               Cow position:
               chr17:1654724-1654136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               595
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 104
               

               Conread position:
               190-761
               

               Cow position:
               chr17:4676465-4677015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 125
               

               Conread position:
               190-761
               

               Cow position:
               chr17:8994298-8993718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               190-761
               

               Cow position:
               chr17:12132967-12132394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               190-761
               

               Cow position:
               chr17:15438829-15439413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               590
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-761
               

               Cow position:
               chr17:15809025-15809611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               593
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-761
               

               Cow position:
               chr17:16447440-16446860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               594
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-761
               

               Cow position:
               chr17:17221353-17221917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               584
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-761
               

               Cow position:
               chr17:20078629-20078058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-761
               

               Cow position:
               chr17:20215129-20215703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 32
               

               Conread position:
               190-761
               

               Cow position:
               chr17:22500422-22500999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               375
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               38, 62
               

               Conread position:
               190-761
               

               Cow position:
               chr17:27978149-27978727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 39
               

               Conread position:
               190-761
               

               Cow position:
               chr17:29212672-29213245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               190-761
               

               Cow position:
               chr17:30413003-30413576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               190-761
               

               Cow position:
               chr17:33792121-33792703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 55
               

               Conread position:
               190-761
               

               Cow position:
               chr17:36790108-36790681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 86
               

               Conread position:
               190-763
               

               Cow position:
               chr17:6071573-6072152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-766
               

               Cow position:
               chr17:9902420-9903008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               601
               

               Alignm identity:
               386
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               28, 70
               

               Conread position:
               190-768
               

               Cow position:
               chr17:184185-184778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:731453-730867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               601
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:1970189-1970783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:4480844-4480251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               601
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:5638851-5638260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               598
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:5806451-5805859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:6612060-6612654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:6955685-6956271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:8068193-8067636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               190-768
               

               Cow position:
               chr17:8212099-8212686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 88
               

               Conread position:
               190-768
               

               Cow position:
               chr17:14212979-14212389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               190-768
               

               Cow position:
               chr17:14242867-14243464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               604
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:15117855-15118448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:18777792-18777204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               602
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:19215357-19214778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:20225640-20226233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:20390812-20391406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:20546175-20546769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:22249214-22248621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:22563183-22563771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               601
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               190-768
               

               Cow position:
               chr17:23321378-23320790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               594
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:24026945-24026353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:26829706-26829114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:28024864-28024259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:29471477-29472062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:34236213-34235619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               190-768
               

               Cow position:
               chr17:43471552-43470959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               191-511
               

               Cow position:
               chr17:18198393-18198715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 174
               

               Conread position:
               191-600
               

               Cow position:
               chr17:1457337-1456921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 32
               

               Conread position:
               191-626
               

               Cow position:
               chr17:20091567-20091140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               302
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               186, 45
               

               Conread position:
               192-648
               

               Cow position:
               chr17:18785462-18785916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               82, 62
               

               Conread position:
               192-759
               

               Cow position:
               chr17:20642754-20643281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               376
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               42, 80
               

               Conread position:
               196-440
               

               Cow position:
               chr17:31311187-31310950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               196-480
               

               Cow position:
               chr17:34004254-34003963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               196-510
               

               Cow position:
               chr17:43498722-43498410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               196-564
               

               Cow position:
               chr17:1672343-1672720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               196-584
               

               Cow position:
               chr17:3780699-3781093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 106
               

               Conread position:
               196-621
               

               Cow position:
               chr17:41898958-41898535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               196-675
               

               Cow position:
               chr17:3550214-3549733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               330
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               196-686
               

               Cow position:
               chr17:2245021-2244525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               196-710
               

               Cow position:
               chr17:14006471-14006980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               196-739
               

               Cow position:
               chr17:6122827-6123384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               196-739
               

               Cow position:
               chr17:18200781-18201325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               372
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               196-739
               

               Cow position:
               chr17:29075311-29074791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               358
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               41, 84
               

               Conread position:
               196-740
               

               Cow position:
               chr17:36266215-36265678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               562
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               196-741
               

               Cow position:
               chr17:29156422-29156981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               196-747
               

               Cow position:
               chr17:4298177-4298734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               196-748
               

               Cow position:
               chr17:4210973-4211539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               196-759
               

               Cow position:
               chr17:16855053-16854487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               196-759
               

               Cow position:
               chr17:16903629-16904200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               196-761
               

               Cow position:
               chr17:2698597-2699150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 175
               

               Conread position:
               196-761
               

               Cow position:
               chr17:11767160-11767741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               382
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 130
               

               Conread position:
               196-761
               

               Cow position:
               chr17:16118415-16117858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               196-761
               

               Cow position:
               chr17:36816931-36817485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               196-768
               

               Cow position:
               chr17:2265233-2265820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               593
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               196-768
               

               Cow position:
               chr17:13689134-13688572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 130
               

               Conread position:
               196-768
               

               Cow position:
               chr17:15351091-15351683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               397
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               196-768
               

               Cow position:
               chr17:15374449-15375002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               584
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               196-768
               

               Cow position:
               chr17:27791738-27791163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               590
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               196-768
               

               Cow position:
               chr17:43991532-43992116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               602
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               197-626
               

               Cow position:
               chr17:3315126-3315565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               197-768
               

               Cow position:
               chr17:10843308-10843904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               603
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               198-465
               

               Cow position:
               chr17:16896819-16896547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               198-486
               

               Cow position:
               chr17:11619246-11619531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               198-745
               

               Cow position:
               chr17:8204992-8205538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 157
               

               Conread position:
               198-761
               

               Cow position:
               chr17:15721643-15722205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 148
               

               Conread position:
               198-765
               

               Cow position:
               chr17:8351544-8352129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               199-636
               

               Cow position:
               chr17:13674435-13674008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               199-768
               

               Cow position:
               chr17:452899-453457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               199-768
               

               Cow position:
               chr17:39824147-39823562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               590
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               202-428
               

               Cow position:
               chr17:3237457-3237689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               12, 167
               

               Conread position:
               202-600
               

               Cow position:
               chr17:18892722-18893118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 64
               

               Conread position:
               202-642
               

               Cow position:
               chr17:24312176-24312627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               202-682
               

               Cow position:
               chr17:2839075-2839556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               202-768
               

               Cow position:
               chr17:36284317-36284899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               204-484
               

               Cow position:
               chr17:32407633-32407350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               31, 162
               

               Conread position:
               205-760
               

               Cow position:
               chr17:5380008-5380560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               209-761
               

               Cow position:
               chr17:19406253-19405686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               210-591
               

               Cow position:
               chr17:37701011-37701398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 105
               

               Conread position:
               210-692
               

               Cow position:
               chr17:19234832-19235309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 50
               

               Conread position:
               215-759
               

               Cow position:
               chr17:932459-933001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               215-761
               

               Cow position:
               chr17:43227398-43227949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               361
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               41, 58
               

               Conread position:
               223-649
               

               Cow position:
               chr17:22134270-22134706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               190, 83
               

               Conread position:
               229-761
               

               Cow position:
               chr17:12476952-12477485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 85
               

               Conread position:
               231-584
               

               Cow position:
               chr17:38828964-38829321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               231-679
               

               Cow position:
               chr17:254179-254629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               294
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               209, 16
               

               Conread position:
               231-738
               

               Cow position:
               chr17:2178929-2179428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               231-745
               

               Cow position:
               chr17:145117-144616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 48
               

               Conread position:
               231-759
               

               Cow position:
               chr17:2201378-2201918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 136
               

               Conread position:
               231-761
               

               Cow position:
               chr17:11913668-11913128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               231-761
               

               Cow position:
               chr17:29083259-29083787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 9
               

               Conread position:
               231-761
               

               Cow position:
               chr17:41893308-41892760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 39
               

               Conread position:
               237-740
               

               Cow position:
               chr17:36747434-36746919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               351
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               104, 69
               

               Conread position:
               250-621
               

               Cow position:
               chr17:29355954-29355578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               10, 76
               

               Conread position:
               260-761
               

               Cow position:
               chr17:15701587-15701084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 10
               

               Conread position:
               280-592
               

               Cow position:
               chr17:36159904-36159589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 44
               

               Conread position:
               280-615
               

               Cow position:
               chr17:21814150-21814484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               131, 61
               

               Conread position:
               281-762
               

               Cow position:
               chr17:23722744-23723224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 64
               

               Conread position:
               282-768
               

               Cow position:
               chr17:18814287-18814778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 104
               

               Conread position:
               283-603
               

               Cow position:
               chr17:19133684-19133370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               128, 80
               

               Conread position:
               283-761
               

               Cow position:
               chr17:2088053-2088528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 95
               

               Conread position:
               284-428
               

               Cow position:
               chr17:32183454-32183598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               111, 79
               

               Conread position:
               285-676
               

               Cow position:
               chr17:15335304-15334917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               61, 83
               

               Conread position:
               286-761
               

               Cow position:
               chr17:21860675-21860194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               286-767
               

               Cow position:
               chr17:38789169-38788663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               335
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               286-767
               

               Cow position:
               chr17:38800409-38799905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               336
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               287-620
               

               Cow position:
               chr17:654683-654345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               86, 26
               

               Conread position:
               287-651
               

               Cow position:
               chr17:21217149-21216785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               52, 75
               

               Conread position:
               287-761
               

               Cow position:
               chr17:14304585-14304130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 43
               

               Conread position:
               288-739
               

               Cow position:
               chr17:16216573-16217028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               305
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               121, 57
               

               Conread position:
               288-761
               

               Cow position:
               chr17:31781333-31780854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 79
               

               Conread position:
               291-619
               

               Cow position:
               chr17:16025403-16025733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               294-651
               

               Cow position:
               chr17:692479-692114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               40, 83
               

               Conread position:
               296-491
               

               Cow position:
               chr17:9001475-9001660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               297-761
               

               Cow position:
               chr17:16464004-16463542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               297-768
               

               Cow position:
               chr17:2005815-2006274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 90
               

               Conread position:
               300-590
               

               Cow position:
               chr17:25551544-25551260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               301-499
               

               Cow position:
               chr17:42313035-42313233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               308-760
               

               Cow position:
               chr17:20807634-20808098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               309-710
               

               Cow position:
               chr17:40908733-40908326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               309-761
               

               Cow position:
               chr17:6081650-6082119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               35, 5
               

               Conread position:
               309-761
               

               Cow position:
               chr17:13921396-13921851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               105, 5
               

               Conread position:
               309-761
               

               Cow position:
               chr17:33934663-33934194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 248
               

               Conread position:
               310-710
               

               Cow position:
               chr17:18340316-18339904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               290
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               310-768
               

               Cow position:
               chr17:13725424-13725893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 57
               

               Conread position:
               314-659
               

               Cow position:
               chr17:40416478-40416119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               7, 74
               

               Conread position:
               314-761
               

               Cow position:
               chr17:15558736-15559195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               314-767
               

               Cow position:
               chr17:16667650-16667203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               297
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               179, 11
               

               Conread position:
               314-768
               

               Cow position:
               chr17:3652563-3652095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               314-768
               

               Cow position:
               chr17:15094298-15093830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               314-768
               

               Cow position:
               chr17:21716626-21717094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               314-768
               

               Cow position:
               chr17:25834581-25835049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               314-768
               

               Cow position:
               chr17:31987036-31986569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               315-479
               

               Cow position:
               chr17:28772444-28772280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               91, 48
               

               Conread position:
               315-715
               

               Cow position:
               chr17:418475-418075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               94, 52
               

               Conread position:
               315-744
               

               Cow position:
               chr17:16505582-16505140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               316-645
               

               Cow position:
               chr17:3414544-3414876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 52
               

               Conread position:
               316-668
               

               Cow position:
               chr17:12743149-12743498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               96, 51
               

               Conread position:
               316-680
               

               Cow position:
               chr17:10285721-10285347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               316-740
               

               Cow position:
               chr17:7615513-7615088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               316-743
               

               Cow position:
               chr17:588878-588444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               316-761
               

               Cow position:
               chr17:20695347-20695802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               318-626
               

               Cow position:
               chr17:38701042-38701341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               163, 49
               

               Conread position:
               319-762
               

               Cow position:
               chr17:22774294-22773834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 48
               

               Conread position:
               320-768
               

               Cow position:
               chr17:35620332-35619881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 47
               

               Conread position:
               321-739
               

               Cow position:
               chr17:46095-45675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               321-761
               

               Cow position:
               chr17:1708585-1708131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               87, 39
               

               Conread position:
               321-768
               

               Cow position:
               chr17:1709524-1709975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               307
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               87, 46
               

               Conread position:
               322-761
               

               Cow position:
               chr17:7802670-7802238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               324-630
               

               Cow position:
               chr17:25567373-25567685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               324-643
               

               Cow position:
               chr17:11775589-11775917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               324-722
               

               Cow position:
               chr17:13707879-13708284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               326-681
               

               Cow position:
               chr17:18721450-18721102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               326-768
               

               Cow position:
               chr17:3197454-3197005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               329-768
               

               Cow position:
               chr17:43539191-43539635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               292, 0
               

               Conread position:
               332-592
               

               Cow position:
               chr17:20272380-20272115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               76, 15
               

               Conread position:
               338-761
               

               Cow position:
               chr17:15687371-15687794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               340-761
               

               Cow position:
               chr17:10445355-10445776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 13
               

               Conread position:
               340-761
               

               Cow position:
               chr17:24293303-24293724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               343-544
               

               Cow position:
               chr17:12539614-12539812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               182, 25
               

               Conread position:
               347-761
               

               Cow position:
               chr17:15228632-15228208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               285
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               352-735
               

               Cow position:
               chr17:28862640-28862249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               354-687
               

               Cow position:
               chr17:6872995-6872659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               354-768
               

               Cow position:
               chr17:20508380-20507959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               286
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               151, 8
               

               Conread position:
               356-764
               

               Cow position:
               chr17:997970-997554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               362-761
               

               Cow position:
               chr17:5748630-5748237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 161
               

               Conread position:
               363-761
               

               Cow position:
               chr17:2534129-2534528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               365-745
               

               Cow position:
               chr17:24617998-24618382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 116
               

               Conread position:
               366-761
               

               Cow position:
               chr17:922837-923244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 80
               

               Conread position:
               368-761
               

               Cow position:
               chr17:2033709-2034115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               282
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               44, 188
               

               Conread position:
               369-748
               

               Cow position:
               chr17:24031019-24031407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               263
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               38, 34
               

               Conread position:
               375-657
               

               Cow position:
               chr17:27052633-27052931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               39, 5
               

               Conread position:
               375-768
               

               Cow position:
               chr17:21181712-21182119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               375-768
               

               Cow position:
               chr17:31671675-31671268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               381-655
               

               Cow position:
               chr17:39611794-39612071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               73, 9
               

               Conread position:
               381-737
               

               Cow position:
               chr17:18841151-18840787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               383-680
               

               Cow position:
               chr17:44222468-44222772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 65
               

               Conread position:
               384-745
               

               Cow position:
               chr17:41014392-41014767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 168
               

               Conread position:
               384-761
               

               Cow position:
               chr17:20814567-20814941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               24, 49
               

               Conread position:
               384-761
               

               Cow position:
               chr17:28539240-28539613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               25, 89
               

               Conread position:
               385-619
               

               Cow position:
               chr17:29662876-29663112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               386-652
               

               Cow position:
               chr17:13916607-13916333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               387-667
               

               Cow position:
               chr17:19342143-19341851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               387-761
               

               Cow position:
               chr17:19998328-19998715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               15, 167
               

               Conread position:
               387-768
               

               Cow position:
               chr17:2081190-2081581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 160
               

               Conread position:
               391-680
               

               Cow position:
               chr17:3049542-3049840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               391-768
               

               Cow position:
               chr17:30693-31074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               392-666
               

               Cow position:
               chr17:37864320-37864039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 101
               

               Conread position:
               392-761
               

               Cow position:
               chr17:5899321-5898954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 151
               

               Conread position:
               395-761
               

               Cow position:
               chr17:8125693-8125328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               396-712
               

               Cow position:
               chr17:22028710-22029042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 160
               

               Conread position:
               406-768
               

               Cow position:
               chr17:16700221-16699845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               90, 144
               

               Conread position:
               406-768
               

               Cow position:
               chr17:34564602-34564978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 139
               

               Conread position:
               408-745
               

               Cow position:
               chr17:13717036-13716699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 27
               

               Conread position:
               409-677
               

               Cow position:
               chr17:20404948-20405216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               87, 42
               

               Conread position:
               410-589
               

               Cow position:
               chr17:22151057-22151244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               79, 57
               

               Conread position:
               410-626
               

               Cow position:
               chr17:42352630-42352416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               410-682
               

               Cow position:
               chr17:40818492-40818777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 21
               

               Conread position:
               410-761
               

               Cow position:
               chr17:11385716-11386077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               410-761
               

               Cow position:
               chr17:39484770-39485124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               78, 64
               

               Conread position:
               410-766
               

               Cow position:
               chr17:39747907-39748270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               87, 128
               

               Conread position:
               410-767
               

               Cow position:
               chr17:5522826-5522458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               412-659
               

               Cow position:
               chr17:8007850-8008102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               83, 127
               

               Conread position:
               413-656
               

               Cow position:
               chr17:18315257-18315509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               75, 128
               

               Conread position:
               416-761
               

               Cow position:
               chr17:3131274-3131631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               72, 133
               

               Conread position:
               416-761
               

               Cow position:
               chr17:17478387-17478742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 135
               

               Conread position:
               420-761
               

               Cow position:
               chr17:17453383-17453036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               82, 129
               

               Conread position:
               436-693
               

               Cow position:
               chr17:38876743-38876998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 107
               

               Conread position:
               437-740
               

               Cow position:
               chr17:31427028-31427324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               437-740
               

               Cow position:
               chr17:34848204-34847900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               441-651
               

               Cow position:
               chr17:11033847-11034064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               444-622
               

               Cow position:
               chr17:15304324-15304140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 105
               

               Conread position:
               444-626
               

               Cow position:
               chr17:38616932-38617123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 101
               

               Conread position:
               444-768
               

               Cow position:
               chr17:11382505-11382167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               38, 106
               

               Conread position:
               445-761
               

               Cow position:
               chr17:4123503-4123180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               447-759
               

               Cow position:
               chr17:43826944-43826637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               450-766
               

               Cow position:
               chr17:18198688-18199010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               452-740
               

               Cow position:
               chr17:1784263-1783964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               46, 161
               

               Conread position:
               456-687
               

               Cow position:
               chr17:7560388-7560158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               57, 26
               

               Conread position:
               460-681
               

               Cow position:
               chr17:6087859-6088080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               460-740
               

               Cow position:
               chr17:17383429-17383715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               460-761
               

               Cow position:
               chr17:21066188-21065870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               34, 161
               

               Conread position:
               461-761
               

               Cow position:
               chr17:43527249-43527553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               461-767
               

               Cow position:
               chr17:41704640-41704332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               462-651
               

               Cow position:
               chr17:20359904-20360094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               467-702
               

               Cow position:
               chr17:23786122-23785890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               471-621
               

               Cow position:
               chr17:3238166-3238316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               474-761
               

               Cow position:
               chr17:3096493-3096777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               474-761
               

               Cow position:
               chr17:29078948-29079235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               483-658
               

               Cow position:
               chr17:30144527-30144347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               484-760
               

               Cow position:
               chr17:44223848-44224134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               487-622
               

               Cow position:
               chr17:34806895-34807028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               489-621
               

               Cow position:
               chr17:45705998-45705869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 8
               

               Conread position:
               489-651
               

               Cow position:
               chr17:35440436-35440269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               489-739
               

               Cow position:
               chr17:6841934-6842188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               489-740
               

               Cow position:
               chr17:12357729-12357475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               490-710
               

               Cow position:
               chr17:28886309-28886534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               490-761
               

               Cow position:
               chr17:42168663-42168929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               491-738
               

               Cow position:
               chr17:5997789-5997551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               491-762
               

               Cow position:
               chr17:20233544-20233809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               491-762
               

               Cow position:
               chr17:21481541-21481811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               35, 50
               

               Conread position:
               492-642
               

               Cow position:
               chr17:43144418-43144268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               493-677
               

               Cow position:
               chr17:21373386-21373567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               493-678
               

               Cow position:
               chr17:11102737-11102534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               493-703
               

               Cow position:
               chr17:35247192-35246979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               493-707
               

               Cow position:
               chr17:45881202-45881418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               493-714
               

               Cow position:
               chr17:1312183-1312404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               493-740
               

               Cow position:
               chr17:24502858-24503109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               493-748
               

               Cow position:
               chr17:18885025-18884766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               493-749
               

               Cow position:
               chr17:6995594-6995849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               8, 171
               

               Conread position:
               493-761
               

               Cow position:
               chr17:38545-38803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               493-761
               

               Cow position:
               chr17:1104831-1105100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               493-761
               

               Cow position:
               chr17:28084651-28084923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               493-762
               

               Cow position:
               chr17:41113697-41113430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               493-768
               

               Cow position:
               chr17:14232252-14231981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               493-768
               

               Cow position:
               chr17:28359128-28359407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               493-768
               

               Cow position:
               chr17:29950853-29951132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               494-626
               

               Cow position:
               chr17:38500903-38500770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               494-642
               

               Cow position:
               chr17:4920797-4920946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               494-710
               

               Cow position:
               chr17:36788586-36788381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               494-739
               

               Cow position:
               chr17:13424608-13424859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               494-760
               

               Cow position:
               chr17:43931948-43932216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               494-761
               

               Cow position:
               chr17:4107711-4107444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               494-761
               

               Cow position:
               chr17:20361454-20361184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               494-761
               

               Cow position:
               chr17:33272363-33272089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               494-761
               

               Cow position:
               chr17:40393330-40393598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               494-762
               

               Cow position:
               chr17:39209406-39209134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 179
               

               Conread position:
               494-767
               

               Cow position:
               chr17:27324530-27324260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               494-767
               

               Cow position:
               chr17:38364571-38364847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               494-768
               

               Cow position:
               chr17:400263-399983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               494-768
               

               Cow position:
               chr17:7396937-7396662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               494-768
               

               Cow position:
               chr17:11786277-11786555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               495-622
               

               Cow position:
               chr17:20911936-20912064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               495-736
               

               Cow position:
               chr17:34317410-34317165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               495-759
               

               Cow position:
               chr17:138971-139236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               495-768
               

               Cow position:
               chr17:8996078-8995807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               496-678
               

               Cow position:
               chr17:25196977-25196795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               496-761
               

               Cow position:
               chr17:26629911-26629647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               496-768
               

               Cow position:
               chr17:28447532-28447818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               499-768
               

               Cow position:
               chr17:11677880-11677605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               499-768
               

               Cow position:
               chr17:12856606-12856883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               500-761
               

               Cow position:
               chr17:22774699-22774962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               502-621
               

               Cow position:
               chr17:25587631-25587513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               502-739
               

               Cow position:
               chr17:2868495-2868256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               502-760
               

               Cow position:
               chr17:44233774-44233512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               502-768
               

               Cow position:
               chr17:4152907-4152642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               6, 39
               

               Conread position:
               503-709
               

               Cow position:
               chr17:11619744-11619946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               503-761
               

               Cow position:
               chr17:17133834-17134092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               503-761
               

               Cow position:
               chr17:17240653-17240394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 22
               

               Conread position:
               504-740
               

               Cow position:
               chr17:18828778-18828540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               505-655
               

               Cow position:
               chr17:18648193-18648345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 37
               

               Conread position:
               505-761
               

               Cow position:
               chr17:16896297-16896045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               505-761
               

               Cow position:
               chr17:36313351-36313609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               505-761
               

               Cow position:
               chr17:36317405-36317663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               505-767
               

               Cow position:
               chr17:23663131-23663389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               505-768
               

               Cow position:
               chr17:35437407-35437675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               506-761
               

               Cow position:
               chr17:33289332-33289079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               507-617
               

               Cow position:
               chr17:30215137-30215027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               507-710
               

               Cow position:
               chr17:33999784-33999577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               507-738
               

               Cow position:
               chr17:18472545-18472772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               507-767
               

               Cow position:
               chr17:4304455-4304715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               507-767
               

               Cow position:
               chr17:32028810-32028552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               509-637
               

               Cow position:
               chr17:13495462-13495590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               509-740
               

               Cow position:
               chr17:5042818-5042591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               513-768
               

               Cow position:
               chr17:2584024-2584282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               516-675
               

               Cow position:
               chr17:41759289-41759447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               112, 24
               

               Conread position:
               516-730
               

               Cow position:
               chr17:36504699-36504485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               518-762
               

               Cow position:
               chr17:36281512-36281759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               523-698
               

               Cow position:
               chr17:3386676-3386847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               524-761
               

               Cow position:
               chr17:21646469-21646234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               526-667
               

               Cow position:
               chr17:2588425-2588568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               526-714
               

               Cow position:
               chr17:8280116-8280300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               526-759
               

               Cow position:
               chr17:9905731-9905966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               526-761
               

               Cow position:
               chr17:35180138-35180374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 5
               

               Conread position:
               526-761
               

               Cow position:
               chr17:38363943-38363692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               102, 14
               

               Conread position:
               526-761
               

               Cow position:
               chr17:44029925-44030165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 118
               

               Conread position:
               526-768
               

               Cow position:
               chr17:3155602-3155356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               111, 14
               

               Conread position:
               529-761
               

               Cow position:
               chr17:31232607-31232367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 190
               

               Conread position:
               529-768
               

               Cow position:
               chr17:13967172-13966929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               95, 11
               

               Conread position:
               530-761
               

               Cow position:
               chr17:36220894-36221126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               7, 179
               

               Conread position:
               535-761
               

               Cow position:
               chr17:24334036-24334259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               535-761
               

               Cow position:
               chr17:31099247-31099476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               535-768
               

               Cow position:
               chr17:34980675-34980911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 120
               

               Conread position:
               537-740
               

               Cow position:
               chr17:20591556-20591764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 178
               

               Conread position:
               540-768
               

               Cow position:
               chr17:40802164-40802392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 143
               

               Conread position:
               541-761
               

               Cow position:
               chr17:13458549-13458322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               542-738
               

               Cow position:
               chr17:6155384-6155583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               542-761
               

               Cow position:
               chr17:42382690-42382467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 136
               

               Conread position:
               543-768
               

               Cow position:
               chr17:39844033-39844262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               544-757
               

               Cow position:
               chr17:25077469-25077257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               126, 83
               

               Conread position:
               546-761
               

               Cow position:
               chr17:8229700-8229918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               546-768
               

               Cow position:
               chr17:5549146-5548919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               546-768
               

               Cow position:
               chr17:28155954-28155727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               546-768
               

               Cow position:
               chr17:40771179-40771406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               548-738
               

               Cow position:
               chr17:1280699-1280892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               550-761
               

               Cow position:
               chr17:907709-907922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               78, 142
               

               Conread position:
               550-761
               

               Cow position:
               chr17:26803456-26803244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               78, 142
               

               Conread position:
               554-761
               

               Cow position:
               chr17:34208751-34208542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               74, 148
               

               Conread position:
               558-761
               

               Cow position:
               chr17:5695572-5695370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               561-761
               

               Cow position:
               chr17:2270135-2270335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               561-768
               

               Cow position:
               chr17:24534423-24534634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               66, 141
               

               Conread position:
               562-768
               

               Cow position:
               chr17:3499577-3499366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               563-768
               

               Cow position:
               chr17:42843423-42843633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               64, 165
               

               Conread position:
               566-768
               

               Cow position:
               chr17:24823638-24823846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               568-761
               

               Cow position:
               chr17:28407903-28407713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 88
               

               Conread position:
               570-740
               

               Cow position:
               chr17:11654590-11654758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               570-748
               

               Cow position:
               chr17:13237345-13237164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               571-768
               

               Cow position:
               chr17:20232352-20232150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               577-739
               

               Cow position:
               chr17:14022029-14021864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               577-761
               

               Cow position:
               chr17:18569512-18569329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               577-768
               

               Cow position:
               chr17:17259663-17259859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               589-768
               

               Cow position:
               chr17:5896514-5896331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 144
               

               Conread position:
               594-761
               

               Cow position:
               chr17:25542404-25542234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               596-754
               

               Cow position:
               chr17:10270880-10271041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               599-761
               

               Cow position:
               chr17:41024216-41024380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               605-761
               

               Cow position:
               chr17:1456827-1456668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               608-761
               

               Cow position:
               chr17:17179468-17179625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-161
Cow position:	chr17:15853670-15853832 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	124
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	71, 79
Conread position:	1-163
Cow position:	chr17:597892-597729 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	122
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	140, 19
Conread position:	1-167
Cow position:	chr17:6071471-6071640 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	127
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	71, 79
Conread position:	1-169
Cow position:	chr17:7560998-7560826 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	132
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	85, 24
Conread position:	1-170
Cow position:	chr17:147858-148030 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	126
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	135, 0
Conread position:	1-171
Cow position:	chr17:2151116-2151287 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	129
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	71, 78
Conread position:	1-175
Cow position:	chr17:29950151-29950327 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	137
Alignm E-value:	8e-30
Alignm gaps (pig, cow):	80, 66
Conread position:	1-180
Cow position:	chr17:13910675-13910491 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	134
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	71, 136
Conread position:	1-181
Cow position:	chr17:138549-138726 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	132
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	74, 11
Conread position:	1-190
Cow position:	chr17:9752726-9752917 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	130
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	140, 0
Conread position:	2-130
Cow position:	chr17:27978048-27978176 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	103
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	0, 0
Conread position:	2-141
Cow position:	chr17:18721941-18721803 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	107
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	134, 0
Conread position:	2-161
Cow position:	chr17:14240006-14240167 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	118
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	141, 134
Conread position:	2-174
Cow position:	chr17:5043656-5043482 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	122
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	139, 0
Conread position:	2-175
Cow position:	chr17:18777893-18777718 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	127
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	141, 134
Conread position:	2-176
Cow position:	chr17:8211998-8212174 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	125
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	139, 134
Conread position:	2-179
Cow position:	chr17:19215457-19215279 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	132
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	141, 76
Conread position:	2-181
Cow position:	chr17:184084-184265 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	132
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	141, 134
Conread position:	2-190
Cow position:	chr17:1654826-1654635 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	136
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	92, 0
Conread position:	2-193
Cow position:	chr17:43231231-43231038 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	142
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	141, 134