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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8051I23.5
        

               
Conread position:
               
1-147
               

               
Cow position:
               
chr24:145452-145308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr24:32363184-32363020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr24:7576668-7576504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr24:38813796-38813967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr24:6052235-6052410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr24:12332561-12332381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr24:35568148-35568323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 133
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr24:9549416-9549591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr24:16559128-16558953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr24:14352503-14352680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr24:40467262-40467081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr24:6412629-6412811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
144, 135
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr24:8607480-8607662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr24:17545376-17545553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr24:22974959-22975141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr24:29190440-29190621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr24:31381549-31381732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr24:35067624-35067444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr24:36028362-36028182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr24:42582365-42582187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 88
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr24:22287729-22287914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr24:26274473-26274288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr24:17764448-17764257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr24:19643444-19643631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
5, 165
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr24:25647916-25647727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
143, 83
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr24:6326219-6326058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr24:3162622-3162798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr24:5991031-5990857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr24:9071689-9071513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr24:15296267-15296443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr24:19688427-19688251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr24:33240689-33240512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
129, 139
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr24:6542785-6542608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
141, 132
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr24:20367519-20367698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:3793636-3793815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:3850747-3850928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:5863200-5863022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:5928931-5929112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:6020926-6020745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:6079577-6079759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:7404908-7404729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
134, 145
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:7597407-7597226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:8431524-8431705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 132
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:12119808-12119629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:16081335-16081154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:18112609-18112788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:22794711-22794892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:25372255-25372436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:25698097-25698277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 125
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:31067893-31067712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:32608458-32608644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:36721595-36721777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 135
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:36726308-36726488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
140, 132
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:36779423-36779604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr24:6666629-6666445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
139, 67
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr24:42938805-42938615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr24:31301857-31302048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr24:17030841-17030680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr24:29084512-29084337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 133
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr24:26412204-26412377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
140, 125
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr24:36556426-36556249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 150
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr24:14376492-14376310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr24:36036673-36036493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr24:14745517-14745747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
138, 163
               

               
Conread position:
               
4-163
               

               
Cow position:
               
chr24:31842694-31842855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr24:1841718-1841544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr24:6964004-6964178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr24:22953716-22953890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr24:40272001-40272175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr24:40551779-40551953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr24:6524149-6524330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr24:9546326-9546505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr24:11208453-11208274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr24:12090133-12090313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr24:20284056-20283879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr24:41005633-41005810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
5-141
               

               
Cow position:
               
chr24:24485041-24484907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
9-181
               

               
Cow position:
               
chr24:17161819-17161645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
134, 127
               

               
Conread position:
               
21-181
               

               
Cow position:
               
chr24:39956931-39956770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 143
               

               
Conread position:
               
22-181
               

               
Cow position:
               
chr24:13374343-13374182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
35-190
               

               
Cow position:
               
chr24:38641563-38641717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
39-190
               

               
Cow position:
               
chr24:33122116-33122268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 95
               

               
Conread position:
               
41-189
               

               
Cow position:
               
chr24:40120908-40120758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
55-181
               

               
Cow position:
               
chr24:13496489-13496617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 81
               

               
Conread position:
               
130-768
               

               
Cow position:
               
chr24:36710032-36710670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
170-761
               

               
Cow position:
               
chr24:27230099-27229498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
178-736
               

               
Cow position:
               
chr24:32849381-32849940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
188-667
               

               
Cow position:
               
chr24:44912119-44912592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 122
               

               
Conread position:
               
189-400
               

               
Cow position:
               
chr24:25285011-25285222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
189-519
               

               
Cow position:
               
chr24:38641627-38641954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
189-737
               

               
Cow position:
               
chr24:31301957-31302499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
189-740
               

               
Cow position:
               
chr24:12332455-12331890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
189-761
               

               
Cow position:
               
chr24:11462759-11462172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 186
               

               
Conread position:
               
189-761
               

               
Cow position:
               
chr24:14376391-14375824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
189-761
               

               
Cow position:
               
chr24:36028262-36027677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
189-761
               

               
Cow position:
               
chr24:43634368-43634939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
166, 90
               

               
Conread position:
               
189-768
               

               
Cow position:
               
chr24:31067793-31067208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
190-351
               

               
Cow position:
               
chr24:21095273-21095111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
190-503
               

               
Cow position:
               
chr24:40120846-40120532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
190-566
               

               
Cow position:
               
chr24:33122180-33122558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
190-587
               

               
Cow position:
               
chr24:16474559-16474963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
190-590
               

               
Cow position:
               
chr24:36036573-36036167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
190-592
               

               
Cow position:
               
chr24:33937182-33937594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-592
               

               
Cow position:
               
chr24:36556326-36555927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
190-593
               

               
Cow position:
               
chr24:37886596-37887004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
190-619
               

               
Cow position:
               
chr24:40551878-40552312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-626
               

               
Cow position:
               
chr24:28497879-28497434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
190-626
               

               
Cow position:
               
chr24:36779524-36779960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
190-649
               

               
Cow position:
               
chr24:31356854-31357311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
190-651
               

               
Cow position:
               
chr24:26274372-26273925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
190-671
               

               
Cow position:
               
chr24:33575509-33576008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
190-711
               

               
Cow position:
               
chr24:11934773-11934250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
163, 23
               

               
Conread position:
               
190-714
               

               
Cow position:
               
chr24:26847350-26846812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
190-715
               

               
Cow position:
               
chr24:14914578-14914078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
190-727
               

               
Cow position:
               
chr24:7576567-7576026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
190-733
               

               
Cow position:
               
chr24:30681869-30681323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-738
               

               
Cow position:
               
chr24:5910060-5910634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr24:6412731-6413294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr24:7748879-7749433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr24:14760145-14760714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 180
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr24:17105624-17105067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr24:42386174-42385614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr24:6035928-6035363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr24:17406350-17406885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr24:20283957-20283395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr24:22975061-22975626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr24:29190541-29191100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr24:32608564-32609125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr24:35067524-35066978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr24:37197473-37196907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
190-744
               

               
Cow position:
               
chr24:20367619-20368163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-744
               

               
Cow position:
               
chr24:40428441-40427873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-748
               

               
Cow position:
               
chr24:39501340-39500792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
190-758
               

               
Cow position:
               
chr24:17310181-17309594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr24:9549517-9550094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr24:13374261-13373672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr24:23052635-23052062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr24:31767206-31767747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr24:41005731-41006308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 179
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:1841619-1841033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:6020825-6020241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:6415416-6416000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:12571164-12571747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:17764346-17763765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:18223227-18222657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:18267233-18266655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:22911926-22912501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:26412304-26412884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:37857423-37856840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:38002784-38002227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:39676664-39676093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
145, 69
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:41062706-41063294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 180
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:42938704-42938128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 148
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr24:45086776-45087360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
190-762
               

               
Cow position:
               
chr24:15667493-15666900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
190-764
               

               
Cow position:
               
chr24:35503713-35503145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
190-767
               

               
Cow position:
               
chr24:41706533-41705959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:207739-207159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 19
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:3162723-3163317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:3793735-3794329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:3850848-3851442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:5863100-5862507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:5929032-5929625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 179
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:5990930-5990341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:6326118-6325525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:7597306-7596716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:9900624-9901218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:10244295-10243715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:11104899-11104305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:11208354-11207760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:12090233-12090819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:13491749-13492342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:14173511-14172938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:15296368-15296962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:16081234-16080640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:17161725-17161131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:17189021-17188425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:18112708-18113303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:20604002-20604595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:22047816-22047227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:22794812-22795402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:22953815-22954399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:25372356-25372949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:29084412-29083812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:36307833-36308423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:38296309-38296903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:40150135-40149551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:40272100-40272689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr24:40467160-40466568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
191-620
               

               
Cow position:
               
chr24:26388639-26388215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
191-768
               

               
Cow position:
               
chr24:6068084-6067500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 32
               

               
Conread position:
               
191-768
               

               
Cow position:
               
chr24:19675080-19675658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
195-761
               

               
Cow position:
               
chr24:6442696-6443274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
196-495
               

               
Cow position:
               
chr24:16908563-16908857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
196-534
               

               
Cow position:
               
chr24:6052343-6052677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-567
               

               
Cow position:
               
chr24:21887891-21888259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
196-593
               

               
Cow position:
               
chr24:36478538-36478131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
196-600
               

               
Cow position:
               
chr24:27587036-27587428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
196-603
               

               
Cow position:
               
chr24:13191420-13191837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-603
               

               
Cow position:
               
chr24:28336798-28336387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
196-621
               

               
Cow position:
               
chr24:24613512-24613941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
214, 184
               

               
Conread position:
               
196-622
               

               
Cow position:
               
chr24:1497980-1498389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
196-651
               

               
Cow position:
               
chr24:35823946-35823478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-655
               

               
Cow position:
               
chr24:21999170-21998709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
196-692
               

               
Cow position:
               
chr24:16266716-16267212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
196-702
               

               
Cow position:
               
chr24:40036695-40036175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
196-711
               

               
Cow position:
               
chr24:9176745-9176225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
196-739
               

               
Cow position:
               
chr24:6055253-6054712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
196-739
               

               
Cow position:
               
chr24:12199107-12198542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-739
               

               
Cow position:
               
chr24:17998588-17999115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
196-740
               

               
Cow position:
               
chr24:8607588-8608145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-748
               

               
Cow position:
               
chr24:16402121-16401599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
196-759
               

               
Cow position:
               
chr24:32853471-32854044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-760
               

               
Cow position:
               
chr24:31381658-31382206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr24:6508900-6508300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr24:14745623-14746178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr24:15935188-15935774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr24:17566109-17566683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr24:29179625-29180184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr24:38813906-38814480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
196-766
               

               
Cow position:
               
chr24:40252898-40253473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
196-768
               

               
Cow position:
               
chr24:12147328-12146743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 153
               

               
Conread position:
               
196-768
               

               
Cow position:
               
chr24:13235528-13236113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-768
               

               
Cow position:
               
chr24:14352611-14353192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
196-768
               

               
Cow position:
               
chr24:32740650-32740082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-768
               

               
Cow position:
               
chr24:32823863-32823287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
197-586
               

               
Cow position:
               
chr24:15471861-15472262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
197-761
               

               
Cow position:
               
chr24:22820951-22821500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
197-761
               

               
Cow position:
               
chr24:37318295-37317751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
197-761
               

               
Cow position:
               
chr24:40519343-40518775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
198-447
               

               
Cow position:
               
chr24:31648733-31648482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
198-641
               

               
Cow position:
               
chr24:28601763-28601327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
198-672
               

               
Cow position:
               
chr24:12038778-12039261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
198-684
               

               
Cow position:
               
chr24:9071580-9071086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
198-690
               

               
Cow position:
               
chr24:6225945-6226414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
198-739
               

               
Cow position:
               
chr24:12203250-12202694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
198-757
               

               
Cow position:
               
chr24:19643555-19644093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
198-761
               

               
Cow position:
               
chr24:29370334-29369760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
199-465
               

               
Cow position:
               
chr24:9861510-9861247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 55
               

               
Conread position:
               
199-649
               

               
Cow position:
               
chr24:39956839-39956384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
199-748
               

               
Cow position:
               
chr24:16056596-16056045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
199-768
               

               
Cow position:
               
chr24:38588044-38588625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 172
               

               
Conread position:
               
200-623
               

               
Cow position:
               
chr24:24485671-24485245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
200-768
               

               
Cow position:
               
chr24:14250320-14249736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
201-740
               

               
Cow position:
               
chr24:6666523-6665986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
201-762
               

               
Cow position:
               
chr24:17411673-17412254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 363
               

               
Conread position:
               
202-761
               

               
Cow position:
               
chr24:45009452-45010020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
202-768
               

               
Cow position:
               
chr24:12696858-12696277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
203-484
               

               
Cow position:
               
chr24:14609599-14609328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
203-740
               

               
Cow position:
               
chr24:20507786-20507232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
207-740
               

               
Cow position:
               
chr24:30870697-30870158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
215-619
               

               
Cow position:
               
chr24:10554023-10553605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
215-760
               

               
Cow position:
               
chr24:7467033-7466485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
216-743
               

               
Cow position:
               
chr24:42815919-42816465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 152
               

               
Conread position:
               
219-591
               

               
Cow position:
               
chr24:1067153-1066780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
226-735
               

               
Cow position:
               
chr24:39067578-39067056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 142
               

               
Conread position:
               
227-617
               

               
Cow position:
               
chr24:17368630-17368242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
227-759
               

               
Cow position:
               
chr24:32361561-32361023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
231-761
               

               
Cow position:
               
chr24:42944360-42943845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
232-761
               

               
Cow position:
               
chr24:41054512-41055027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
236-761
               

               
Cow position:
               
chr24:21058726-21059269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
72, 83
               

               
Conread position:
               
239-761
               

               
Cow position:
               
chr24:23491424-23491955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
246-761
               

               
Cow position:
               
chr24:30893559-30893046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
249-768
               

               
Cow position:
               
chr24:34760821-34761354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
260-761
               

               
Cow position:
               
chr24:16601225-16600707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 107
               

               
Conread position:
               
273-761
               

               
Cow position:
               
chr24:6271458-6271949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
278-665
               

               
Cow position:
               
chr24:40102354-40102741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
281-760
               

               
Cow position:
               
chr24:16100144-16100614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 31
               

               
Conread position:
               
281-761
               

               
Cow position:
               
chr24:31815603-31816061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
284-767
               

               
Cow position:
               
chr24:30765671-30766152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
284-768
               

               
Cow position:
               
chr24:32759761-32759273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
285-748
               

               
Cow position:
               
chr24:27761417-27761879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
285-760
               

               
Cow position:
               
chr24:29064619-29064136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
285-761
               

               
Cow position:
               
chr24:39482521-39483009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
286-740
               

               
Cow position:
               
chr24:6507571-6507132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
286-746
               

               
Cow position:
               
chr24:32231483-32231027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
286-762
               

               
Cow position:
               
chr24:14945695-14946163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
288-729
               

               
Cow position:
               
chr24:40259046-40258600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
289-626
               

               
Cow position:
               
chr24:16297848-16297506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
209, 86
               

               
Conread position:
               
290-748
               

               
Cow position:
               
chr24:36562938-36562479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
120, 44
               

               
Conread position:
               
292-761
               

               
Cow position:
               
chr24:25677068-25677534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 75
               

               
Conread position:
               
294-761
               

               
Cow position:
               
chr24:13299453-13298972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
295-759
               

               
Cow position:
               
chr24:15417032-15416577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
298-559
               

               
Cow position:
               
chr24:27762606-27762878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
299-758
               

               
Cow position:
               
chr24:28688778-28689232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
299-768
               

               
Cow position:
               
chr24:15793653-15793169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
300-740
               

               
Cow position:
               
chr24:11940126-11940578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
301-655
               

               
Cow position:
               
chr24:7404551-7404191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
301-739
               

               
Cow position:
               
chr24:36268438-36267990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
301-740
               

               
Cow position:
               
chr24:16646563-16646128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
301-768
               

               
Cow position:
               
chr24:17544578-17544116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
302-761
               

               
Cow position:
               
chr24:31125510-31125966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
307-670
               

               
Cow position:
               
chr24:19322173-19321806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
308-631
               

               
Cow position:
               
chr24:25264248-25264576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
308-715
               

               
Cow position:
               
chr24:40896868-40896449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
308-761
               

               
Cow position:
               
chr24:2073976-2074445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
310-768
               

               
Cow position:
               
chr24:6340078-6340549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
311-740
               

               
Cow position:
               
chr24:14308154-14308604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
312-768
               

               
Cow position:
               
chr24:27345519-27345049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
313-682
               

               
Cow position:
               
chr24:27959675-27959304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
313-761
               

               
Cow position:
               
chr24:33053642-33053175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
314-641
               

               
Cow position:
               
chr24:43777402-43777724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
196, 32
               

               
Conread position:
               
314-761
               

               
Cow position:
               
chr24:32125573-32125115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
314-761
               

               
Cow position:
               
chr24:33640119-33639660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-761
               

               
Cow position:
               
chr24:41671237-41671690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr24:10035665-10035197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr24:11081401-11080936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr24:12446873-12447338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr24:18740990-18740522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
315-761
               

               
Cow position:
               
chr24:25424070-25424516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
315-768
               

               
Cow position:
               
chr24:12377736-12377270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
316-666
               

               
Cow position:
               
chr24:44363959-44363611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
316-711
               

               
Cow position:
               
chr24:43842277-43842672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
316-740
               

               
Cow position:
               
chr24:34319337-34319776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
316-761
               

               
Cow position:
               
chr24:19466869-19466423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
316-761
               

               
Cow position:
               
chr24:41200099-41200521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
316-768
               

               
Cow position:
               
chr24:32304030-32303591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
317-671
               

               
Cow position:
               
chr24:19040767-19040411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
318-677
               

               
Cow position:
               
chr24:38716277-38715915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
319-768
               

               
Cow position:
               
chr24:15675245-15674774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
320-761
               

               
Cow position:
               
chr24:22287940-22288365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
322-651
               

               
Cow position:
               
chr24:6342433-6342765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
322-759
               

               
Cow position:
               
chr24:144967-144518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
325-761
               

               
Cow position:
               
chr24:32359756-32359308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
326-622
               

               
Cow position:
               
chr24:25101081-25100781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
328-761
               

               
Cow position:
               
chr24:17752853-17752414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
331-591
               

               
Cow position:
               
chr24:39902156-39901887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
334-740
               

               
Cow position:
               
chr24:5608421-5607998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
336-765
               

               
Cow position:
               
chr24:25543785-25543370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
162, 66
               

               
Conread position:
               
340-693
               

               
Cow position:
               
chr24:19706644-19707003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
342-735
               

               
Cow position:
               
chr24:13000734-13000334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
347-739
               

               
Cow position:
               
chr24:39160445-39160056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
347-768
               

               
Cow position:
               
chr24:26794828-26795263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
353-662
               

               
Cow position:
               
chr24:15880555-15880873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
354-768
               

               
Cow position:
               
chr24:15083998-15084426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
356-740
               

               
Cow position:
               
chr24:5652866-5652479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
361-716
               

               
Cow position:
               
chr24:40445095-40445441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
363-740
               

               
Cow position:
               
chr24:31370861-31370477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
364-746
               

               
Cow position:
               
chr24:42582129-42581712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
364-762
               

               
Cow position:
               
chr24:25110676-25111084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
366-768
               

               
Cow position:
               
chr24:38487693-38488106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 37
               

               
Conread position:
               
375-622
               

               
Cow position:
               
chr24:40129077-40129328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
375-761
               

               
Cow position:
               
chr24:29071967-29071581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
375-768
               

               
Cow position:
               
chr24:7782684-7782284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
375-768
               

               
Cow position:
               
chr24:33239439-33239036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
377-739
               

               
Cow position:
               
chr24:14379059-14378685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
380-739
               

               
Cow position:
               
chr24:7031046-7030664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
381-626
               

               
Cow position:
               
chr24:25058533-25058286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
381-767
               

               
Cow position:
               
chr24:16651817-16652206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
383-755
               

               
Cow position:
               
chr24:29394913-29394534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
383-759
               

               
Cow position:
               
chr24:16863052-16863422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
383-761
               

               
Cow position:
               
chr24:12293138-12293530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
384-618
               

               
Cow position:
               
chr24:21094824-21094580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 161
               

               
Conread position:
               
384-759
               

               
Cow position:
               
chr24:19509943-19509561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
385-603
               

               
Cow position:
               
chr24:5946841-5946615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 158
               

               
Conread position:
               
388-761
               

               
Cow position:
               
chr24:39122897-39123260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 180
               

               
Conread position:
               
390-703
               

               
Cow position:
               
chr24:43061455-43061156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
391-618
               

               
Cow position:
               
chr24:37204782-37204556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
391-621
               

               
Cow position:
               
chr24:37205838-37205617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
395-759
               

               
Cow position:
               
chr24:23486125-23486494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 154
               

               
Conread position:
               
399-681
               

               
Cow position:
               
chr24:16561386-16561101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 70
               

               
Conread position:
               
406-768
               

               
Cow position:
               
chr24:11748638-11748263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
407-740
               

               
Cow position:
               
chr24:13117113-13117449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
81, 142
               

               
Conread position:
               
407-740
               

               
Cow position:
               
chr24:30767863-30768204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
410-676
               

               
Cow position:
               
chr24:38678005-38678270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
410-686
               

               
Cow position:
               
chr24:31050434-31050712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
410-713
               

               
Cow position:
               
chr24:19671515-19671834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
410-750
               

               
Cow position:
               
chr24:10697628-10697302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
217, 88
               

               
Conread position:
               
410-761
               

               
Cow position:
               
chr24:9210588-9210228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 143
               

               
Conread position:
               
413-686
               

               
Cow position:
               
chr24:18629972-18630249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
414-761
               

               
Cow position:
               
chr24:24627142-24626802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
415-651
               

               
Cow position:
               
chr24:11006134-11006379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
416-710
               

               
Cow position:
               
chr24:11839335-11839641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 137
               

               
Conread position:
               
418-651
               

               
Cow position:
               
chr24:20974236-20974000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
418-761
               

               
Cow position:
               
chr24:16996065-16996416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
437-766
               

               
Cow position:
               
chr24:17683782-17683457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
445-753
               

               
Cow position:
               
chr24:31323450-31323769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
43, 102
               

               
Conread position:
               
446-667
               

               
Cow position:
               
chr24:17030404-17030180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
446-761
               

               
Cow position:
               
chr24:25245218-25245541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
452-761
               

               
Cow position:
               
chr24:29680106-29679799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
452-761
               

               
Cow position:
               
chr24:43882690-43883019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
456-761
               

               
Cow position:
               
chr24:10260165-10259864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
460-735
               

               
Cow position:
               
chr24:38619989-38620262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
460-740
               

               
Cow position:
               
chr24:11886364-11886650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
460-760
               

               
Cow position:
               
chr24:5365175-5364886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
460-761
               

               
Cow position:
               
chr24:24249927-24250231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
470-761
               

               
Cow position:
               
chr24:29131020-29130713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
470-762
               

               
Cow position:
               
chr24:37387153-37386854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
478-740
               

               
Cow position:
               
chr24:8417868-8418139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
482-761
               

               
Cow position:
               
chr24:1473021-1473297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
488-676
               

               
Cow position:
               
chr24:11412755-11412947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
488-739
               

               
Cow position:
               
chr24:38812214-38811960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
488-761
               

               
Cow position:
               
chr24:40281169-40280890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
489-622
               

               
Cow position:
               
chr24:27766618-27766480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
489-732
               

               
Cow position:
               
chr24:27127539-27127298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
489-761
               

               
Cow position:
               
chr24:33229902-33230175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
490-613
               

               
Cow position:
               
chr24:25439739-25439863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
491-761
               

               
Cow position:
               
chr24:13511461-13511186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
491-761
               

               
Cow position:
               
chr24:23161036-23161315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
491-761
               

               
Cow position:
               
chr24:35568410-35568684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
491-761
               

               
Cow position:
               
chr24:40637983-40638252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
491-768
               

               
Cow position:
               
chr24:9045132-9044850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
493-648
               

               
Cow position:
               
chr24:28486178-28486020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
493-674
               

               
Cow position:
               
chr24:16216813-16216628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
493-681
               

               
Cow position:
               
chr24:6542324-6542143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
493-715
               

               
Cow position:
               
chr24:31796959-31797191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
493-737
               

               
Cow position:
               
chr24:27627515-27627275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
493-739
               

               
Cow position:
               
chr24:2731304-2731066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
493-739
               

               
Cow position:
               
chr24:39441551-39441307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
493-749
               

               
Cow position:
               
chr24:36486806-36486547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
493-760
               

               
Cow position:
               
chr24:5748963-5748701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr24:11876117-11876389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr24:12264461-12264190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
135, 214
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr24:31257223-31256954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr24:41487440-41487691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
493-768
               

               
Cow position:
               
chr24:35837232-35836954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
493-768
               

               
Cow position:
               
chr24:44973480-44973203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
494-626
               

               
Cow position:
               
chr24:7821835-7821968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr24:39473020-39472845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
494-671
               

               
Cow position:
               
chr24:38291409-38291589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
494-710
               

               
Cow position:
               
chr24:31308651-31308877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
494-736
               

               
Cow position:
               
chr24:6414325-6414077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
494-740
               

               
Cow position:
               
chr24:21265257-21265008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
494-753
               

               
Cow position:
               
chr24:6160845-6160585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
494-758
               

               
Cow position:
               
chr24:42075195-42075467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr24:31770044-31770316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr24:34270759-34271026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
494-762
               

               
Cow position:
               
chr24:384489-384757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
494-762
               

               
Cow position:
               
chr24:30018552-30018280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:2118437-2118717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:6524705-6524991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:8754082-8754362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:11215821-11215541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:13496867-13497147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:13542621-13542341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:16654438-16654158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:17455615-17455894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:17720853-17720578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr24:27632633-27632905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
495-651
               

               
Cow position:
               
chr24:8885504-8885346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
132, 150
               

               
Conread position:
               
495-740
               

               
Cow position:
               
chr24:13304930-13304683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
495-740
               

               
Cow position:
               
chr24:27905674-27905915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
495-761
               

               
Cow position:
               
chr24:2597929-2598187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
496-675
               

               
Cow position:
               
chr24:16908881-16909066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
496-714
               

               
Cow position:
               
chr24:36131628-36131409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
496-763
               

               
Cow position:
               
chr24:37481077-37480801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
497-760
               

               
Cow position:
               
chr24:2300018-2300280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
498-732
               

               
Cow position:
               
chr24:27684201-27683963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
498-740
               

               
Cow position:
               
chr24:18374024-18374279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
503-761
               

               
Cow position:
               
chr24:6183641-6183897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
138, 39
               

               
Conread position:
               
504-713
               

               
Cow position:
               
chr24:21103739-21103530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
504-733
               

               
Cow position:
               
chr24:12942825-12943061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
505-706
               

               
Cow position:
               
chr24:36726809-36727015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
20, 188
               

               
Conread position:
               
505-740
               

               
Cow position:
               
chr24:7088379-7088139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
505-740
               

               
Cow position:
               
chr24:25269747-25269512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
507-624
               

               
Cow position:
               
chr24:29112768-29112651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
507-740
               

               
Cow position:
               
chr24:15372373-15372605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
507-761
               

               
Cow position:
               
chr24:6230450-6230692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
507-761
               

               
Cow position:
               
chr24:12577277-12577518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
507-761
               

               
Cow position:
               
chr24:31186199-31186445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
507-761
               

               
Cow position:
               
chr24:39217374-39217118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
507-762
               

               
Cow position:
               
chr24:43042453-43042703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr24:13319875-13319608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
509-621
               

               
Cow position:
               
chr24:44877104-44877216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
511-749
               

               
Cow position:
               
chr24:36721988-36722225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
511-768
               

               
Cow position:
               
chr24:15691994-15692256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
513-739
               

               
Cow position:
               
chr24:44989371-44989141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
516-768
               

               
Cow position:
               
chr24:40382247-40381991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
517-767
               

               
Cow position:
               
chr24:18712575-18712820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
518-740
               

               
Cow position:
               
chr24:6079851-6080071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
523-740
               

               
Cow position:
               
chr24:202361-202142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
526-768
               

               
Cow position:
               
chr24:24818994-24818749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
528-768
               

               
Cow position:
               
chr24:11118557-11118803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
529-674
               

               
Cow position:
               
chr24:16475147-16475294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
529-761
               

               
Cow position:
               
chr24:5644301-5644073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
531-740
               

               
Cow position:
               
chr24:13173914-13173705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
532-761
               

               
Cow position:
               
chr24:31420173-31420396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
533-740
               

               
Cow position:
               
chr24:12235015-12234808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
95, 106
               

               
Conread position:
               
534-739
               

               
Cow position:
               
chr24:12207724-12207516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
534-759
               

               
Cow position:
               
chr24:19815807-19815578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
535-737
               

               
Cow position:
               
chr24:9861713-9861910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
535-768
               

               
Cow position:
               
chr24:4666690-4666927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 131
               

               
Conread position:
               
535-768
               

               
Cow position:
               
chr24:35793457-35793695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
537-761
               

               
Cow position:
               
chr24:41333611-41333383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 138
               

               
Conread position:
               
537-768
               

               
Cow position:
               
chr24:29170271-29170505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 130
               

               
Conread position:
               
539-761
               

               
Cow position:
               
chr24:43906471-43906696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
541-761
               

               
Cow position:
               
chr24:34493635-34493414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
541-768
               

               
Cow position:
               
chr24:24137564-24137335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
542-761
               

               
Cow position:
               
chr24:14146259-14146037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
543-740
               

               
Cow position:
               
chr24:26173876-26173678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 154
               

               
Conread position:
               
544-730
               

               
Cow position:
               
chr24:7348422-7348610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
546-740
               

               
Cow position:
               
chr24:29375627-29375825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
546-760
               

               
Cow position:
               
chr24:38474419-38474203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 159
               

               
Conread position:
               
546-761
               

               
Cow position:
               
chr24:5850122-5849904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 149
               

               
Conread position:
               
546-768
               

               
Cow position:
               
chr24:11311905-11311678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
546-768
               

               
Cow position:
               
chr24:42694119-42693892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
548-761
               

               
Cow position:
               
chr24:16268943-16268730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
548-761
               

               
Cow position:
               
chr24:28723717-28723935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
549-768
               

               
Cow position:
               
chr24:40789972-40789748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
551-740
               

               
Cow position:
               
chr24:27290171-27290363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
551-761
               

               
Cow position:
               
chr24:37036908-37037121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
551-762
               

               
Cow position:
               
chr24:33035728-33035514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
554-761
               

               
Cow position:
               
chr24:27763100-27763310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
554-768
               

               
Cow position:
               
chr24:12507793-12508012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
555-739
               

               
Cow position:
               
chr24:38479654-38479468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
555-755
               

               
Cow position:
               
chr24:36800698-36800899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 115
               

               
Conread position:
               
556-766
               

               
Cow position:
               
chr24:35877631-35877418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
557-766
               

               
Cow position:
               
chr24:6502020-6501810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
559-761
               

               
Cow position:
               
chr24:19782419-19782617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
561-768
               

               
Cow position:
               
chr24:3845055-3844845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
563-768
               

               
Cow position:
               
chr24:25710402-25710192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
568-761
               

               
Cow position:
               
chr24:43733098-43733284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
569-761
               

               
Cow position:
               
chr24:28494386-28494581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
569-768
               

               
Cow position:
               
chr24:35625189-35624986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
569-768
               

               
Cow position:
               
chr24:36106064-36105860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
571-761
               

               
Cow position:
               
chr24:4616432-4616239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
577-737
               

               
Cow position:
               
chr24:15472480-15472642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
577-768
               

               
Cow position:
               
chr24:17865120-17864924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
577-768
               

               
Cow position:
               
chr24:18234425-18234621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
583-748
               

               
Cow position:
               
chr24:5141281-5141447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
598-761
               

               
Cow position:
               
chr24:19679213-19679379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
633-761
               

               
Cow position:
               
chr24:39608424-39608296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.