Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051I23.5 | 
| Conread position: | 1-145 | 
| Cow position: | chr3:49542211-49542067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-161 | 
| Cow position: | chr3:40826387-40826550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 21, 80 | 
| Conread position: | 1-168 | 
| Cow position: | chr3:35619547-35619716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 1-168 | 
| Cow position: | chr3:80930264-80930095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 144, 0 | 
| Conread position: | 1-171 | 
| Cow position: | chr3:2707879-2707707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-175 | 
| Cow position: | chr3:23204684-23204509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-175 | 
| Cow position: | chr3:36875071-36874895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-175 | 
| Cow position: | chr3:38095889-38096065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 29, 34 | 
| Conread position: | 1-175 | 
| Cow position: | chr3:45977492-45977668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 1-175 | 
| Cow position: | chr3:57481747-57481571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-175 | 
| Cow position: | chr3:69930844-69930668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-176 | 
| Cow position: | chr3:52689746-52689919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 1-178 | 
| Cow position: | chr3:58207863-58207684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 1-180 | 
| Cow position: | chr3:2790741-2790922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 1-180 | 
| Cow position: | chr3:27245700-27245520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:597105-597279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 71, 28 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:6864650-6864830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:7476930-7476748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 142, 135 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:10243651-10243831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:11384307-11384488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 53, 83 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:15656320-15656139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:19215906-19216088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:19753737-19753563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:21179269-21179087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:23287345-23287165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 82, 73 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:24443105-24442931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 142, 70 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:31396364-31396545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 142, 81 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:31423137-31422955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:33125265-33125083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:37893821-37894003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 142, 135 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:39856453-39856635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:40337155-40336974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 142, 14 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:47986429-47986611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 142, 135 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:48603241-48603424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 69, 79 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:49134547-49134365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:54654186-54654003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 14, 83 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:63218931-63219106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 114, 14 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:63239040-63238858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:66623202-66623384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 140, 135 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:72633063-72633245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:73451324-73451142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:74060460-74060641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 140, 54 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:75038852-75038670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:78024440-78024264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 74, 44 | 
| Conread position: | 1-181 | 
| Cow position: | chr3:81101068-81101250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 1-182 | 
| Cow position: | chr3:5951626-5951443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 80, 66 | 
| Conread position: | 1-182 | 
| Cow position: | chr3:83700330-83700147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 1-185 | 
| Cow position: | chr3:63732992-63732809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 140, 16 | 
| Conread position: | 1-188 | 
| Cow position: | chr3:24530692-24530880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 140, 58 | 
| Conread position: | 1-189 | 
| Cow position: | chr3:18353381-18353191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 45, 39 | 
| Conread position: | 1-190 | 
| Cow position: | chr3:12254035-12254225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 142, 33 | 
| Conread position: | 1-190 | 
| Cow position: | chr3:35508841-35509033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 79, 74 | 
| Conread position: | 1-190 | 
| Cow position: | chr3:40344224-40344414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 71, 87 | 
| Conread position: | 1-190 | 
| Cow position: | chr3:58953146-58953337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 67, 77 | 
| Conread position: | 1-190 | 
| Cow position: | chr3:74850157-74849966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 140, 0 | 
| Conread position: | 1-190 | 
| Cow position: | chr3:77447979-77448166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 145, 42 | 
| Conread position: | 1-191 | 
| Cow position: | chr3:46136084-46135892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 71, 82 | 
| Conread position: | 2-134 | 
| Cow position: | chr3:41207606-41207474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 2-137 | 
| Cow position: | chr3:77272805-77272670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 2-163 | 
| Cow position: | chr3:24638402-24638566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 69, 51 | 
| Conread position: | 2-164 | 
| Cow position: | chr3:53047801-53047638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 141, 66 | 
| Conread position: | 2-165 | 
| Cow position: | chr3:45947825-45947660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-174 | 
| Cow position: | chr3:32620050-32619877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 141, 53 | 
| Conread position: | 2-174 | 
| Cow position: | chr3:45237499-45237323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 99, 136 | 
| Conread position: | 2-175 | 
| Cow position: | chr3:38496786-38496962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 96, 135 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:1033853-1034029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:2866664-2866488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:6713998-6714174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:14863875-14864051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 68, 78 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:16293918-16293742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:19941882-19942059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 98, 135 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:39327539-39327714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 141, 132 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:42508218-42508042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:48845997-48846172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 141, 106 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:66888205-66888029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-176 | 
| Cow position: | chr3:76000965-76000794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 141, 23 | 
| Conread position: | 2-177 | 
| Cow position: | chr3:25056680-25056861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 2-179 | 
| Cow position: | chr3:60178109-60177929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 142, 92 | 
| Conread position: | 2-180 | 
| Cow position: | chr3:23497767-23497587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 2-180 | 
| Cow position: | chr3:46224885-46225065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 141, 132 | 
| Conread position: | 2-180 | 
| Cow position: | chr3:53880276-53880096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-180 | 
| Cow position: | chr3:66968888-66968708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-180 | 
| Cow position: | chr3:70914273-70914092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:302222-302403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 73, 81 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:823100-822918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 24, 135 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:2074774-2074954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 141, 37 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:2508337-2508156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 26, 163 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:2572518-2572699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:2834548-2834367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:5474530-5474711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:6838020-6838201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:7155816-7155635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:12667695-12667875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 133, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:13115446-13115265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 141, 132 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:13723722-13723540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 21, 135 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:14054264-14054445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 70, 78 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:15416457-15416638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:16225868-16226047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 141, 128 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:18759431-18759249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 141, 132 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:18862431-18862612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:19798161-19797980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:19881040-19881221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:20379726-20379545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:20475504-20475686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 43, 135 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:20795284-20795465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 139, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:21593275-21593456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:22338899-22339080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:24265193-24265370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 141, 74 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:26742882-26742701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:27783315-27783135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 135, 161 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:29574135-29573954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 73, 81 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:30351266-30351447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:31021673-31021854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 9, 14 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:31934347-31934167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 133, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:33326373-33326553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 139, 106 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:34557379-34557198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 141, 132 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:35342641-35342822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:35918555-35918736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:36121166-36121347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 139, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:37021417-37021239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 28, 38 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:37972028-37972206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 141, 15 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:40048880-40049061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:40101860-40101680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 133, 92 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:40285325-40285144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:40520949-40520768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:41019323-41019142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:43084233-43084415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 141, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:45184992-45184813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 141, 88 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:45311783-45311964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 141, 117 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:45692047-45691870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 139, 122 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:47078623-47078441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 73, 135 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:48272770-48272953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:48527549-48527731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 52, 78 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:49611217-49611036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:49732804-49732624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 20, 14 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:49999127-49999308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:52150295-52150114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:53674230-53674049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:54569019-54569199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 70, 77 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:56148283-56148464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:56696839-56697020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 68, 78 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:57455949-57456130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 68, 78 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:57554768-57554946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 134, 65 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:58034646-58034465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 141, 132 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:63148648-63148470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:63736379-63736559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 79, 66 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:64653660-64653840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 141, 15 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:64875764-64875945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:65084925-65085106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:65473421-65473601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:68510345-68510164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:68696974-68696793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 141, 132 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:68870759-68870578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:68889581-68889400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:72175315-72175134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:73636872-73637052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 141, 109 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:78520038-78520219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 2-181 | 
| Cow position: | chr3:83767244-83767417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 2-190 | 
| Cow position: | chr3:944685-944872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 144, 66 | 
| Conread position: | 2-190 | 
| Cow position: | chr3:20602866-20602676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 142, 0 | 
| Conread position: | 2-190 | 
| Cow position: | chr3:29325133-29325322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 138, 0 | 
| Conread position: | 2-190 | 
| Cow position: | chr3:65582204-65582015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 2-190 | 
| Cow position: | chr3:82931615-82931804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 135, 63 | 
| Conread position: | 3-176 | 
| Cow position: | chr3:19883462-19883637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 140, 133 | 
| Conread position: | 3-176 | 
| Cow position: | chr3:50204557-50204734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 140, 133 | 
| Conread position: | 3-176 | 
| Cow position: | chr3:79668099-79668277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 3-177 | 
| Cow position: | chr3:46014688-46014514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 138, 118 | 
| Conread position: | 3-180 | 
| Cow position: | chr3:4039940-4039760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 72, 80 | 
| Conread position: | 3-181 | 
| Cow position: | chr3:2432661-2432481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 72, 80 | 
| Conread position: | 3-181 | 
| Cow position: | chr3:55374077-55374253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 142, 133 | 
| Conread position: | 3-181 | 
| Cow position: | chr3:72669570-72669388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 72, 80 | 
| Conread position: | 3-190 | 
| Cow position: | chr3:39555595-39555407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 138, 111 | 
| Conread position: | 3-190 | 
| Cow position: | chr3:56719334-56719145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 141, 0 | 
| Conread position: | 3-227 | 
| Cow position: | chr3:75165077-75164847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 69, 206 | 
| Conread position: | 4-159 | 
| Cow position: | chr3:24315966-24316123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-171 | 
| Cow position: | chr3:47272887-47272717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 4-176 | 
| Cow position: | chr3:2921250-2921424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-176 | 
| Cow position: | chr3:25689648-25689824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 50, 132 | 
| Conread position: | 4-176 | 
| Cow position: | chr3:32412493-32412319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-180 | 
| Cow position: | chr3:33692057-33691879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:4191944-4191765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:6528985-6529164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:11417539-11417718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:13035503-13035324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:13276289-13276110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:18814499-18814678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 68, 76 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:28435706-28435527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:30321250-30321428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 68, 76 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:32490720-32490541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:32768783-32768962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:33269224-33269403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 79, 64 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:37280388-37280567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:42846341-42846516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 68, 76 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:43190277-43190098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 68, 76 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:43525746-43525567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:49930828-49931007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:56485267-56485088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:58950454-58950633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 139, 125 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:64317732-64317921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:65988914-65989092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 68, 76 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:66736572-66736400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 26, 33 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:68273833-68274012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-181 | 
| Cow position: | chr3:76864424-76864603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 139, 132 | 
| Conread position: | 4-182 | 
| Cow position: | chr3:56645338-56645158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 5-157 | 
| Cow position: | chr3:80871923-80872080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 5-181 | 
| Cow position: | chr3:55245537-55245715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 138, 131 | 
| Conread position: | 8-187 | 
| Cow position: | chr3:49336194-49336373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 133, 86 | 
| Conread position: | 10-181 | 
| Cow position: | chr3:59602800-59602973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 62, 70 | 
| Conread position: | 14-176 | 
| Cow position: | chr3:34504120-34503956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 129, 122 | 
| Conread position: | 20-180 | 
| Cow position: | chr3:37658993-37659155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 123, 117 | 
| Conread position: | 20-181 | 
| Cow position: | chr3:31121128-31120965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 55, 63 | 
| Conread position: | 20-190 | 
| Cow position: | chr3:56124555-56124727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 95, 146 | 
| Conread position: | 20-192 | 
| Cow position: | chr3:19108569-19108740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 124, 58 | 
| Conread position: | 22-164 | 
| Cow position: | chr3:29801819-29801963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 22-181 | 
| Cow position: | chr3:45675767-45675606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 121, 114 | 
| Conread position: | 23-181 | 
| Cow position: | chr3:82363797-82363957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 25-175 | 
| Cow position: | chr3:49416834-49416681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 47, 55 | 
| Conread position: | 27-190 | 
| Cow position: | chr3:16114422-16114584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 114, 60 | 
| Conread position: | 49-190 | 
| Cow position: | chr3:67045210-67045069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 34, 21 | 
| Conread position: | 121-761 | 
| Cow position: | chr3:64317775-64318402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 51 | 
| Conread position: | 167-761 | 
| Cow position: | chr3:18759352-18758735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 32 | 
| Conread position: | 172-620 | 
| Cow position: | chr3:37451173-37451621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 51 | 
| Conread position: | 183-761 | 
| Cow position: | chr3:25689742-25690303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 47, 39 | 
| Conread position: | 187-761 | 
| Cow position: | chr3:15747471-15746926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 44, 10 | 
| Conread position: | 188-510 | 
| Cow position: | chr3:27783216-27782917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 36, 62 | 
| Conread position: | 188-622 | 
| Cow position: | chr3:18852048-18852473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 40, 70 | 
| Conread position: | 188-761 | 
| Cow position: | chr3:1483120-1483697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 9 | 
| Conread position: | 188-761 | 
| Cow position: | chr3:51490393-51490966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 9 | 
| Conread position: | 188-768 | 
| Cow position: | chr3:26722721-26722134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 9 | 
| Conread position: | 189-486 | 
| Cow position: | chr3:34464458-34464753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 27, 83 | 
| Conread position: | 189-499 | 
| Cow position: | chr3:45615427-45615730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 223, 47 | 
| Conread position: | 189-552 | 
| Cow position: | chr3:19795001-19794632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 41, 34 | 
| Conread position: | 189-558 | 
| Cow position: | chr3:54087275-54086915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 41, 34 | 
| Conread position: | 189-578 | 
| Cow position: | chr3:46224985-46225370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 43, 33 | 
| Conread position: | 189-592 | 
| Cow position: | chr3:63736479-63736888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 45, 75 | 
| Conread position: | 189-592 | 
| Cow position: | chr3:81101169-81101583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 34 | 
| Conread position: | 189-675 | 
| Cow position: | chr3:79595726-79596206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 20 | 
| Conread position: | 189-707 | 
| Cow position: | chr3:24638502-24639024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 34 | 
| Conread position: | 189-714 | 
| Cow position: | chr3:38254735-38255258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 148 | 
| Conread position: | 189-732 | 
| Cow position: | chr3:61677629-61678181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 17 | 
| Conread position: | 189-737 | 
| Cow position: | chr3:46135983-46135438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 190 | 
| Conread position: | 189-739 | 
| Cow position: | chr3:23217233-23216679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 34 | 
| Conread position: | 189-740 | 
| Cow position: | chr3:2707778-2707219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 34 | 
| Conread position: | 189-740 | 
| Cow position: | chr3:12749991-12750540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 32 | 
| Conread position: | 189-748 | 
| Cow position: | chr3:52689847-52690387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 263, 31 | 
| Conread position: | 189-760 | 
| Cow position: | chr3:13683613-13684195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 39, 17 | 
| Conread position: | 189-761 | 
| Cow position: | chr3:14452749-14453329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 41, 34 | 
| Conread position: | 189-761 | 
| Cow position: | chr3:16114496-16115074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 63 | 
| Conread position: | 189-761 | 
| Cow position: | chr3:18353280-18352686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 137 | 
| Conread position: | 189-761 | 
| Cow position: | chr3:24530792-24531348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 581 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 137 | 
| Conread position: | 189-761 | 
| Cow position: | chr3:49387743-49388329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 33 | 
| Conread position: | 189-761 | 
| Cow position: | chr3:53414110-53414682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 14 | 
| Conread position: | 189-761 | 
| Cow position: | chr3:54347314-54346734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 180 | 
| Conread position: | 189-761 | 
| Cow position: | chr3:67045157-67044591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 305, 147 | 
| Conread position: | 189-761 | 
| Cow position: | chr3:80930163-80929616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 138 | 
| Conread position: | 189-767 | 
| Cow position: | chr3:57531221-57531809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 604 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 46, 20 | 
| Conread position: | 189-768 | 
| Cow position: | chr3:14863975-14864564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 33 | 
| Conread position: | 189-768 | 
| Cow position: | chr3:23497667-23497066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 91 | 
| Conread position: | 189-768 | 
| Cow position: | chr3:42186560-42187154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 117 | 
| Conread position: | 189-768 | 
| Cow position: | chr3:52150195-52149599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 603 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 34 | 
| Conread position: | 190-428 | 
| Cow position: | chr3:10412338-10412578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 45, 111 | 
| Conread position: | 190-447 | 
| Cow position: | chr3:54291354-54291604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 41, 18 | 
| Conread position: | 190-479 | 
| Cow position: | chr3:74852845-74853128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 44, 18 | 
| Conread position: | 190-485 | 
| Cow position: | chr3:37486950-37486661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 190-499 | 
| Cow position: | chr3:26532912-26532603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 41, 57 | 
| Conread position: | 190-499 | 
| Cow position: | chr3:82363877-82364178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 34, 175 | 
| Conread position: | 190-500 | 
| Cow position: | chr3:27454841-27454533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-501 | 
| Cow position: | chr3:35508944-35509254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 141 | 
| Conread position: | 190-519 | 
| Cow position: | chr3:74850055-74849733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 174 | 
| Conread position: | 190-558 | 
| Cow position: | chr3:11384410-11384780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-559 | 
| Cow position: | chr3:61173586-61173962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 26, 79 | 
| Conread position: | 190-564 | 
| Cow position: | chr3:38496888-38497277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-565 | 
| Cow position: | chr3:12665229-12665615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-570 | 
| Cow position: | chr3:64427207-64426822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 38, 62 | 
| Conread position: | 190-575 | 
| Cow position: | chr3:42500162-42500549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-586 | 
| Cow position: | chr3:77726552-77726929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 221, 32 | 
| Conread position: | 190-589 | 
| Cow position: | chr3:19126366-19126781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 42, 34 | 
| Conread position: | 190-590 | 
| Cow position: | chr3:3653195-3652804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-590 | 
| Cow position: | chr3:40826490-40826899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-591 | 
| Cow position: | chr3:56102832-56103240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 178 | 
| Conread position: | 190-592 | 
| Cow position: | chr3:24573075-24572664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 34, 179 | 
| Conread position: | 190-592 | 
| Cow position: | chr3:29130187-29130594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 40, 16 | 
| Conread position: | 190-592 | 
| Cow position: | chr3:72669470-72669056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 33, 181 | 
| Conread position: | 190-593 | 
| Cow position: | chr3:20578743-20578329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 44, 90 | 
| Conread position: | 190-600 | 
| Cow position: | chr3:29801900-29802322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 38, 79 | 
| Conread position: | 190-600 | 
| Cow position: | chr3:35854490-35854058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 41, 150 | 
| Conread position: | 190-602 | 
| Cow position: | chr3:18886551-18886972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-603 | 
| Cow position: | chr3:46014588-46014174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 19 | 
| Conread position: | 190-603 | 
| Cow position: | chr3:68344235-68343840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 219, 33 | 
| Conread position: | 190-610 | 
| Cow position: | chr3:597201-597621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 42, 26 | 
| Conread position: | 190-612 | 
| Cow position: | chr3:49999228-49999660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 38, 82 | 
| Conread position: | 190-617 | 
| Cow position: | chr3:13723620-13723182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-619 | 
| Cow position: | chr3:42424402-42423971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-621 | 
| Cow position: | chr3:23012302-23012736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 160, 39 | 
| Conread position: | 190-626 | 
| Cow position: | chr3:822998-822551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-626 | 
| Cow position: | chr3:6864752-6865188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-626 | 
| Cow position: | chr3:36671528-36671079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 42, 32 | 
| Conread position: | 190-626 | 
| Cow position: | chr3:73416089-73416537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 180 | 
| Conread position: | 190-637 | 
| Cow position: | chr3:48095995-48095557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 85, 34 | 
| Conread position: | 190-638 | 
| Cow position: | chr3:22352709-22353163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 91 | 
| Conread position: | 190-638 | 
| Cow position: | chr3:70250301-70249860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 30, 66 | 
| Conread position: | 190-639 | 
| Cow position: | chr3:22045068-22044611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 49, 73 | 
| Conread position: | 190-640 | 
| Cow position: | chr3:67466765-67466320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 34, 12 | 
| Conread position: | 190-647 | 
| Cow position: | chr3:5951524-5951063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-647 | 
| Cow position: | chr3:69208141-69207674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 42, 35 | 
| Conread position: | 190-651 | 
| Cow position: | chr3:944784-945261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 23 | 
| Conread position: | 190-651 | 
| Cow position: | chr3:40337054-40336579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-656 | 
| Cow position: | chr3:6529084-6529564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-657 | 
| Cow position: | chr3:34015503-34015984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-671 | 
| Cow position: | chr3:54863530-54863036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-671 | 
| Cow position: | chr3:77448080-77448560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 30 | 
| Conread position: | 190-676 | 
| Cow position: | chr3:51068808-51068343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 45, 67 | 
| Conread position: | 190-677 | 
| Cow position: | chr3:50346915-50347388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 48, 33 | 
| Conread position: | 190-678 | 
| Cow position: | chr3:6688919-6689408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 42, 33 | 
| Conread position: | 190-678 | 
| Cow position: | chr3:64653760-64654260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-683 | 
| Cow position: | chr3:47986531-47987037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 33 | 
| Conread position: | 190-685 | 
| Cow position: | chr3:40101760-40101254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 91 | 
| Conread position: | 190-686 | 
| Cow position: | chr3:16716735-16716240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 30 | 
| Conread position: | 190-687 | 
| Cow position: | chr3:3845875-3845379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 115 | 
| Conread position: | 190-692 | 
| Cow position: | chr3:57977455-57976944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 216, 44 | 
| Conread position: | 190-706 | 
| Cow position: | chr3:55245635-55246165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 535 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-710 | 
| Cow position: | chr3:579266-579798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-711 | 
| Cow position: | chr3:26993218-26993748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 115 | 
| Conread position: | 190-711 | 
| Cow position: | chr3:39555495-39554977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 535 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 12 | 
| Conread position: | 190-714 | 
| Cow position: | chr3:45675686-45675148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-714 | 
| Cow position: | chr3:54788169-54788715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 196 | 
| Conread position: | 190-714 | 
| Cow position: | chr3:63688818-63688294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 77 | 
| Conread position: | 190-715 | 
| Cow position: | chr3:7438474-7437929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 40, 34 | 
| Conread position: | 190-729 | 
| Cow position: | chr3:66847301-66846766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 39 | 
| Conread position: | 190-731 | 
| Cow position: | chr3:12673283-12672752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 91 | 
| Conread position: | 190-738 | 
| Cow position: | chr3:6785409-6785967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-738 | 
| Cow position: | chr3:53047701-53047145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-738 | 
| Cow position: | chr3:60178009-60177462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 93 | 
| Conread position: | 190-739 | 
| Cow position: | chr3:3837501-3836953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-739 | 
| Cow position: | chr3:25056784-25057318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 83 | 
| Conread position: | 190-739 | 
| Cow position: | chr3:45977594-45978154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 569 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-739 | 
| Cow position: | chr3:46505860-46506426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-739 | 
| Cow position: | chr3:46752938-46753495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 569 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-739 | 
| Cow position: | chr3:63219028-63219579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 47 | 
| Conread position: | 190-739 | 
| Cow position: | chr3:64376619-64376065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 179 | 
| Conread position: | 190-740 | 
| Cow position: | chr3:5886978-5887532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 107 | 
| Conread position: | 190-740 | 
| Cow position: | chr3:27547357-27546780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 187 | 
| Conread position: | 190-740 | 
| Cow position: | chr3:32220815-32221364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 83 | 
| Conread position: | 190-740 | 
| Cow position: | chr3:33125163-33124603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-740 | 
| Cow position: | chr3:38095991-38096556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 33 | 
| Conread position: | 190-740 | 
| Cow position: | chr3:48603344-48603912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 33 | 
| Conread position: | 190-740 | 
| Cow position: | chr3:56645239-56644675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-740 | 
| Cow position: | chr3:65989013-65989562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 25 | 
| Conread position: | 190-740 | 
| Cow position: | chr3:76000869-76000308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-748 | 
| Cow position: | chr3:3885105-3884531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 19 | 
| Conread position: | 190-757 | 
| Cow position: | chr3:66968787-66968206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-758 | 
| Cow position: | chr3:45184893-45184328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-758 | 
| Cow position: | chr3:56148384-56148962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:10243751-10244334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:13276190-13275603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:21179167-21178582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:23204582-23203998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 89 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:23287243-23286677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:24443011-24442432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:31423035-31422451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:57481645-57481083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:59602893-59603475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 118 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:59864574-59865154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:66829847-66829276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:70914171-70913587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 120 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:72633165-72633746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:75038750-75038167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-759 | 
| Cow position: | chr3:78024344-78023773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-760 | 
| Cow position: | chr3:43671516-43670952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 111 | 
| Conread position: | 190-760 | 
| Cow position: | chr3:62793984-62793413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 85 | 
| Conread position: | 190-760 | 
| Cow position: | chr3:84198874-84199445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 580 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 147 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:322768-322182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 32 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:2834447-2833862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:2904351-2903788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 51 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:6896918-6897503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 91 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:13886217-13886793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 19 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:14212482-14213067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:15570528-15571112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 34 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:15656218-15655643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 81 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:15663352-15662790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 581 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 137 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:17056973-17056398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 16 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:19718175-19717595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 91 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:20795385-20795969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 173 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:21593376-21593958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:28435607-28435031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:30938588-30939173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 111 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:31021774-31022349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 142 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:31383877-31383308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 40, 144 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:31418628-31419203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 108 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:31748772-31749342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 82 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:31934246-31933669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 107 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:34557278-34556713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:37972126-37972703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:38251936-38252489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 581 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:39214464-39215052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 176 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:40344326-40344900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 106 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:40520848-40520263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:41654635-41655200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 580 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 70, 58 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:42508117-42507537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:42602748-42603330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 82 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:47078521-47077936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:49296841-49297412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 32 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:50111933-50111380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 59 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:52257423-52256843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 111 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:52726176-52725597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 216, 34 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:55374177-55374741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 35 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:56297476-56298061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:56696940-56697514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:64024940-64024365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:64171338-64171904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 143 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:65085026-65085610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:72175214-72174622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:75997797-75997220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 33 | 
| Conread position: | 190-761 | 
| Cow position: | chr3:83767345-83767921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 33 | 
| Conread position: | 190-762 | 
| Cow position: | chr3:13248928-13248343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-762 | 
| Cow position: | chr3:49907941-49907357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-762 | 
| Cow position: | chr3:79979093-79978518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 82 | 
| Conread position: | 190-766 | 
| Cow position: | chr3:3300734-3301306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:302323-302907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:2074874-2075466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:2572619-2573213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:2866563-2865969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:5474631-5475225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:6442160-6442752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:6838121-6838718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 603 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 116 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:7155715-7155121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 179 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:7246012-7245423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:11417638-11418232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:13035404-13034810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:14438892-14438303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:14466770-14466186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:14680179-14680767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:15416558-15417152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:16225969-16226560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 30 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:18814598-18815179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:18862532-18863123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:19753635-19753050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 218, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:19881141-19881735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:19883562-19884139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:20379625-20379034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:20475606-20476184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:24265290-24265883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:26742781-26742191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 179 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:29311242-29311831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:30351367-30351969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 609 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 127 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:30615845-30615256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 66 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:34504031-34503453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:35109318-35109912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:35612246-35612828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:35885029-35884436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 604 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 82 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:36121267-36121860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 82 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:36862008-36861421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:37627983-37628568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 91 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:37893923-37894519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 603 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:40048981-40049571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:41019222-41018625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:43084334-43084903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 83 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:43525647-43525054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:44926905-44927499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 603 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:48215389-48214816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 66 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:48272873-48273470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 106 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:49463463-49462885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 32 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:49564108-49564702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:49605350-49604761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 173 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:49611116-49610530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:53880175-53879580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:56485168-56484569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 604 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:58950553-58951143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:60185079-60184485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:65473522-65474113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:66888104-66887507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 604 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:68696873-68696289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:68717618-68717026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:68870658-68870069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:68889480-68888887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:69930742-69930151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 104 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:74060561-74061153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 179 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:75772043-75771449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:76864523-76865117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:78520139-78520731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 33 | 
| Conread position: | 190-768 | 
| Cow position: | chr3:79668202-79668796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 179 | 
| Conread position: | 191-642 | 
| Cow position: | chr3:12676549-12676081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 32 | 
| Conread position: | 191-651 | 
| Cow position: | chr3:3552415-3552878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 78 | 
| Conread position: | 191-739 | 
| Cow position: | chr3:24275662-24276207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 179 | 
| Conread position: | 191-740 | 
| Cow position: | chr3:36874968-36874406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 178 | 
| Conread position: | 191-761 | 
| Cow position: | chr3:19108652-19109237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 22 | 
| Conread position: | 191-761 | 
| Cow position: | chr3:19941985-19942559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 32 | 
| Conread position: | 191-761 | 
| Cow position: | chr3:24351787-24352354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 15 | 
| Conread position: | 191-768 | 
| Cow position: | chr3:36416832-36417425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 32 | 
| Conread position: | 192-753 | 
| Cow position: | chr3:51539410-51539983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 8 | 
| Conread position: | 192-761 | 
| Cow position: | chr3:22272588-22272016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 72 | 
| Conread position: | 194-761 | 
| Cow position: | chr3:48362033-48362596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 107 | 
| Conread position: | 196-464 | 
| Cow position: | chr3:79316349-79316617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 196-499 | 
| Cow position: | chr3:8605807-8605511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 32, 59 | 
| Conread position: | 196-514 | 
| Cow position: | chr3:56719228-56718909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 126 | 
| Conread position: | 196-531 | 
| Cow position: | chr3:80872030-80872375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 84 | 
| Conread position: | 196-554 | 
| Cow position: | chr3:39327646-39328005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 34, 26 | 
| Conread position: | 196-589 | 
| Cow position: | chr3:43418754-43419144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 26, 34 | 
| Conread position: | 196-590 | 
| Cow position: | chr3:7856522-7856924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 93, 70 | 
| Conread position: | 196-596 | 
| Cow position: | chr3:57742611-57743018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 28, 121 | 
| Conread position: | 196-599 | 
| Cow position: | chr3:12254142-12254550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 28 | 
| Conread position: | 196-599 | 
| Cow position: | chr3:76709273-76709687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 43, 176 | 
| Conread position: | 196-600 | 
| Cow position: | chr3:33326479-33326895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 172 | 
| Conread position: | 196-613 | 
| Cow position: | chr3:57968243-57968661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 59, 82 | 
| Conread position: | 196-619 | 
| Cow position: | chr3:58129188-58129620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 174 | 
| Conread position: | 196-619 | 
| Cow position: | chr3:72603313-72603745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 173, 40 | 
| Conread position: | 196-621 | 
| Cow position: | chr3:31810400-31810830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 120, 10 | 
| Conread position: | 196-682 | 
| Cow position: | chr3:24262736-24262246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 507 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 81 | 
| Conread position: | 196-704 | 
| Cow position: | chr3:56153397-56153903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 143, 33 | 
| Conread position: | 196-711 | 
| Cow position: | chr3:22512410-22512925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 33, 82 | 
| Conread position: | 196-738 | 
| Cow position: | chr3:50461422-50461957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 27 | 
| Conread position: | 196-739 | 
| Cow position: | chr3:49416749-49416197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 27 | 
| Conread position: | 196-740 | 
| Cow position: | chr3:24586138-24585572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 89 | 
| Conread position: | 196-740 | 
| Cow position: | chr3:50921137-50921682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 27 | 
| Conread position: | 196-748 | 
| Cow position: | chr3:21026310-21025763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 569 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 36, 28 | 
| Conread position: | 196-759 | 
| Cow position: | chr3:30321355-30321915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 573 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 27 | 
| Conread position: | 196-759 | 
| Cow position: | chr3:42846444-42847018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 27 | 
| Conread position: | 196-759 | 
| Cow position: | chr3:73451216-73450638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 27 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:2852139-2851561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 85 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:13311908-13311322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 27 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:14284833-14285405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 63 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:27091087-27090529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 27 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:27866754-27867331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 105 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:34087100-34086554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 38, 76 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:43190172-43189590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 27 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:45691940-45691382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 16 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:46682931-46683510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 27 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:49336293-49336863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 143 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:56160717-56160150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 26 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:59332679-59333235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 26 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:72863948-72863373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 34, 61 | 
| Conread position: | 196-761 | 
| Cow position: | chr3:76187637-76188199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 27 | 
| Conread position: | 196-762 | 
| Cow position: | chr3:3031337-3031909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 41 | 
| Conread position: | 196-762 | 
| Cow position: | chr3:37983268-37982688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 105 | 
| Conread position: | 196-763 | 
| Cow position: | chr3:65582097-65581531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 173 | 
| Conread position: | 196-764 | 
| Cow position: | chr3:56101362-56101920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 20 | 
| Conread position: | 196-766 | 
| Cow position: | chr3:76932798-76932223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 13 | 
| Conread position: | 196-768 | 
| Cow position: | chr3:2117544-2118138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 27 | 
| Conread position: | 196-768 | 
| Cow position: | chr3:35043257-35043845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 26 | 
| Conread position: | 196-768 | 
| Cow position: | chr3:38869665-38870251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 76 | 
| Conread position: | 196-768 | 
| Cow position: | chr3:63202340-63202908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 26 | 
| Conread position: | 196-768 | 
| Cow position: | chr3:82931721-82932307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 125 | 
| Conread position: | 197-670 | 
| Cow position: | chr3:4690906-4691394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 35, 28 | 
| Conread position: | 197-681 | 
| Cow position: | chr3:16657768-16657276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 27, 12 | 
| Conread position: | 197-740 | 
| Cow position: | chr3:12667803-12668348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 80 | 
| Conread position: | 197-759 | 
| Cow position: | chr3:47272781-47272204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 27 | 
| Conread position: | 197-768 | 
| Cow position: | chr3:11509751-11509184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 581 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 27 | 
| Conread position: | 198-511 | 
| Cow position: | chr3:33318232-33318535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 30, 52 | 
| Conread position: | 198-626 | 
| Cow position: | chr3:58207753-58207321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 36, 79 | 
| Conread position: | 198-739 | 
| Cow position: | chr3:70520187-70519650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 58 | 
| Conread position: | 198-761 | 
| Cow position: | chr3:22867868-22867301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 171 | 
| Conread position: | 198-761 | 
| Cow position: | chr3:35918664-35919236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 25 | 
| Conread position: | 198-761 | 
| Cow position: | chr3:37015336-37015894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 61 | 
| Conread position: | 198-761 | 
| Cow position: | chr3:55461557-55460993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 118 | 
| Conread position: | 199-746 | 
| Cow position: | chr3:11278515-11279064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 57 | 
| Conread position: | 199-761 | 
| Cow position: | chr3:43662352-43662909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 140 | 
| Conread position: | 200-617 | 
| Cow position: | chr3:77225835-77226246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 162 | 
| Conread position: | 200-738 | 
| Cow position: | chr3:26566876-26567428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 102 | 
| Conread position: | 200-761 | 
| Cow position: | chr3:38862831-38863352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 22 | 
| Conread position: | 200-768 | 
| Cow position: | chr3:21779676-21779092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 23 | 
| Conread position: | 201-585 | 
| Cow position: | chr3:64683907-64683515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 78, 35 | 
| Conread position: | 202-499 | 
| Cow position: | chr3:8391469-8391758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 32, 113 | 
| Conread position: | 202-551 | 
| Cow position: | chr3:64282213-64281861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 22, 13 | 
| Conread position: | 202-626 | 
| Cow position: | chr3:57593999-57594437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 27, 36 | 
| Conread position: | 202-762 | 
| Cow position: | chr3:55190748-55190199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 26, 54 | 
| Conread position: | 202-768 | 
| Cow position: | chr3:26919826-26920413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 96 | 
| Conread position: | 203-586 | 
| Cow position: | chr3:20999964-20999573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 208, 28 | 
| Conread position: | 204-759 | 
| Cow position: | chr3:22724664-22724111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 6 | 
| Conread position: | 205-761 | 
| Cow position: | chr3:83289847-83289273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 581 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 157 | 
| Conread position: | 205-767 | 
| Cow position: | chr3:77453567-77454122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 580 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 20, 53 | 
| Conread position: | 206-650 | 
| Cow position: | chr3:65960996-65961446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 22, 115 | 
| Conread position: | 207-739 | 
| Cow position: | chr3:72376350-72376885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 21, 98 | 
| Conread position: | 208-740 | 
| Cow position: | chr3:14279793-14280331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 76 | 
| Conread position: | 208-761 | 
| Cow position: | chr3:23010463-23011028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 15 | 
| Conread position: | 209-651 | 
| Cow position: | chr3:29392009-29391566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 11, 26 | 
| Conread position: | 209-761 | 
| Cow position: | chr3:47696925-47697487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 210-670 | 
| Cow position: | chr3:26660848-26660386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 13 | 
| Conread position: | 210-768 | 
| Cow position: | chr3:41207454-41206880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 580 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 13 | 
| Conread position: | 212-761 | 
| Cow position: | chr3:5420932-5420367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 574 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 14 | 
| Conread position: | 215-710 | 
| Cow position: | chr3:40686634-40687137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 135 | 
| Conread position: | 221-723 | 
| Cow position: | chr3:78625407-78625901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 223-748 | 
| Cow position: | chr3:51235366-51234841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 48 | 
| Conread position: | 225-626 | 
| Cow position: | chr3:14724248-14724644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 46, 69 | 
| Conread position: | 227-465 | 
| Cow position: | chr3:66650979-66650739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 102, 29 | 
| Conread position: | 227-768 | 
| Cow position: | chr3:7677624-7678179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 26 | 
| Conread position: | 229-728 | 
| Cow position: | chr3:57590480-57590968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 266, 37 | 
| Conread position: | 229-761 | 
| Cow position: | chr3:33469525-33468989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 34 | 
| Conread position: | 230-760 | 
| Cow position: | chr3:56099876-56099336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 36 | 
| Conread position: | 231-582 | 
| Cow position: | chr3:15988074-15988431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 181, 136 | 
| Conread position: | 231-659 | 
| Cow position: | chr3:33254724-33254289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 16 | 
| Conread position: | 231-667 | 
| Cow position: | chr3:69271736-69272184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 39 | 
| Conread position: | 231-678 | 
| Cow position: | chr3:35056116-35056558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 177, 39 | 
| Conread position: | 231-681 | 
| Cow position: | chr3:4017641-4018108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 178, 35 | 
| Conread position: | 231-714 | 
| Cow position: | chr3:44536853-44536351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 73 | 
| Conread position: | 231-740 | 
| Cow position: | chr3:226751-226237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 47 | 
| Conread position: | 231-749 | 
| Cow position: | chr3:66977804-66978329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 23 | 
| Conread position: | 231-758 | 
| Cow position: | chr3:37599871-37600405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 45 | 
| Conread position: | 231-761 | 
| Cow position: | chr3:22235364-22234815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 16 | 
| Conread position: | 231-761 | 
| Cow position: | chr3:34393152-34392608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 136 | 
| Conread position: | 231-761 | 
| Cow position: | chr3:64678569-64679075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 43, 37 | 
| Conread position: | 231-768 | 
| Cow position: | chr3:4030878-4031433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 61 | 
| Conread position: | 231-768 | 
| Cow position: | chr3:64655345-64655890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 73 | 
| Conread position: | 232-607 | 
| Cow position: | chr3:17460360-17460736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 179, 31 | 
| Conread position: | 233-730 | 
| Cow position: | chr3:36170801-36170317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 27 | 
| Conread position: | 233-761 | 
| Cow position: | chr3:13352994-13352447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 7, 40 | 
| Conread position: | 233-761 | 
| Cow position: | chr3:51597062-51597588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 112 | 
| Conread position: | 236-761 | 
| Cow position: | chr3:58766283-58766805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 63 | 
| Conread position: | 237-678 | 
| Cow position: | chr3:25753395-25753856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 62 | 
| Conread position: | 238-511 | 
| Cow position: | chr3:55454921-55454648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 38, 32 | 
| Conread position: | 238-761 | 
| Cow position: | chr3:55129494-55130025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 88 | 
| Conread position: | 239-709 | 
| Cow position: | chr3:45863784-45863315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 259, 114 | 
| Conread position: | 240-671 | 
| Cow position: | chr3:51314221-51314656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 116 | 
| Conread position: | 240-761 | 
| Cow position: | chr3:47209949-47209416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 20 | 
| Conread position: | 241-761 | 
| Cow position: | chr3:18575470-18574945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 51 | 
| Conread position: | 241-768 | 
| Cow position: | chr3:24455385-24454868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 34 | 
| Conread position: | 245-761 | 
| Cow position: | chr3:18557200-18557698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 34, 67 | 
| Conread position: | 246-768 | 
| Cow position: | chr3:14634081-14633563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 163, 60 | 
| Conread position: | 250-509 | 
| Cow position: | chr3:32840293-32840030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 59, 45 | 
| Conread position: | 252-591 | 
| Cow position: | chr3:6828348-6828685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 151, 72 | 
| Conread position: | 263-600 | 
| Cow position: | chr3:35030611-35030263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 148, 100 | 
| Conread position: | 274-766 | 
| Cow position: | chr3:8451738-8451260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 15, 105 | 
| Conread position: | 277-768 | 
| Cow position: | chr3:74391723-74391223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 15 | 
| Conread position: | 279-646 | 
| Cow position: | chr3:62156781-62157158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 118, 82 | 
| Conread position: | 279-680 | 
| Cow position: | chr3:59607475-59607878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 88 | 
| Conread position: | 279-758 | 
| Cow position: | chr3:17059279-17058817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 46, 23 | 
| Conread position: | 283-636 | 
| Cow position: | chr3:22948604-22948250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 113, 41 | 
| Conread position: | 284-714 | 
| Cow position: | chr3:20781260-20780831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 15 | 
| Conread position: | 285-637 | 
| Cow position: | chr3:67430700-67430342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 129, 12 | 
| Conread position: | 285-641 | 
| Cow position: | chr3:10371564-10371918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 189, 13 | 
| Conread position: | 285-745 | 
| Cow position: | chr3:521765-522233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 63 | 
| Conread position: | 285-746 | 
| Cow position: | chr3:77550147-77550618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 50 | 
| Conread position: | 286-583 | 
| Cow position: | chr3:40615964-40615667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 117, 28 | 
| Conread position: | 286-594 | 
| Cow position: | chr3:58064957-58064646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 123, 75 | 
| Conread position: | 286-598 | 
| Cow position: | chr3:38003416-38003734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 38, 96 | 
| Conread position: | 286-612 | 
| Cow position: | chr3:64277935-64278261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 209, 55 | 
| Conread position: | 286-626 | 
| Cow position: | chr3:16869217-16868868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 82 | 
| Conread position: | 286-714 | 
| Cow position: | chr3:51254593-51255028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 59 | 
| Conread position: | 286-739 | 
| Cow position: | chr3:24908977-24909447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 126, 81 | 
| Conread position: | 286-739 | 
| Cow position: | chr3:43317059-43316607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 31, 26 | 
| Conread position: | 286-756 | 
| Cow position: | chr3:45880932-45881404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 51 | 
| Conread position: | 286-761 | 
| Cow position: | chr3:22084101-22083620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 128, 81 | 
| Conread position: | 286-761 | 
| Cow position: | chr3:60932456-60932940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 68 | 
| Conread position: | 286-765 | 
| Cow position: | chr3:27223227-27223705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 26, 46 | 
| Conread position: | 287-500 | 
| Cow position: | chr3:29582300-29582512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 44, 11 | 
| Conread position: | 287-631 | 
| Cow position: | chr3:62896925-62896591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 122, 80 | 
| Conread position: | 287-740 | 
| Cow position: | chr3:72390109-72390574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 29 | 
| Conread position: | 287-750 | 
| Cow position: | chr3:61538796-61539265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 58 | 
| Conread position: | 287-760 | 
| Cow position: | chr3:22220331-22220811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 28 | 
| Conread position: | 287-761 | 
| Cow position: | chr3:76136509-76137002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 29 | 
| Conread position: | 287-762 | 
| Cow position: | chr3:51337469-51336975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 129, 53 | 
| Conread position: | 287-768 | 
| Cow position: | chr3:47691167-47691645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 93 | 
| Conread position: | 292-768 | 
| Cow position: | chr3:21082068-21082544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 53 | 
| Conread position: | 293-753 | 
| Cow position: | chr3:67745584-67745110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 43, 20 | 
| Conread position: | 299-761 | 
| Cow position: | chr3:59118576-59118102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 69 | 
| Conread position: | 299-768 | 
| Cow position: | chr3:2507438-2506962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 68 | 
| Conread position: | 300-607 | 
| Cow position: | chr3:68043301-68042987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 108, 62 | 
| Conread position: | 300-740 | 
| Cow position: | chr3:17864632-17865084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 251 | 
| Conread position: | 300-759 | 
| Cow position: | chr3:11784567-11785025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 67 | 
| Conread position: | 300-759 | 
| Cow position: | chr3:24432585-24433051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 67 | 
| Conread position: | 300-759 | 
| Cow position: | chr3:49542004-49541534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 67 | 
| Conread position: | 300-759 | 
| Cow position: | chr3:77472785-77472326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 67 | 
| Conread position: | 300-768 | 
| Cow position: | chr3:16156727-16157202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 16 | 
| Conread position: | 300-768 | 
| Cow position: | chr3:54876867-54877326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 67 | 
| Conread position: | 300-768 | 
| Cow position: | chr3:64293729-64294195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 108, 66 | 
| Conread position: | 304-761 | 
| Cow position: | chr3:66028597-66029058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 32, 59 | 
| Conread position: | 304-768 | 
| Cow position: | chr3:21100013-21100488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 31 | 
| Conread position: | 306-761 | 
| Cow position: | chr3:23170014-23169562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 7 | 
| Conread position: | 308-651 | 
| Cow position: | chr3:73811286-73811650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 99, 55 | 
| Conread position: | 308-761 | 
| Cow position: | chr3:57900143-57900614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 101, 60 | 
| Conread position: | 308-761 | 
| Cow position: | chr3:78547047-78546592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 59 | 
| Conread position: | 309-739 | 
| Cow position: | chr3:83911779-83912203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 100, 59 | 
| Conread position: | 309-761 | 
| Cow position: | chr3:17937805-17937341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 58 | 
| Conread position: | 309-761 | 
| Cow position: | chr3:73293221-73293690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 51, 10 | 
| Conread position: | 309-767 | 
| Cow position: | chr3:52513675-52514133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 100, 30 | 
| Conread position: | 310-566 | 
| Cow position: | chr3:18252761-18253021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 98, 57 | 
| Conread position: | 310-592 | 
| Cow position: | chr3:73305391-73305678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 43, 25 | 
| Conread position: | 310-704 | 
| Cow position: | chr3:9289820-9290222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 46, 66 | 
| Conread position: | 310-713 | 
| Cow position: | chr3:51477906-51478327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 40, 245 | 
| Conread position: | 313-630 | 
| Cow position: | chr3:19824850-19824527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 175, 54 | 
| Conread position: | 313-715 | 
| Cow position: | chr3:56684955-56685368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 51 | 
| Conread position: | 313-744 | 
| Cow position: | chr3:39921729-39921288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 54 | 
| Conread position: | 313-761 | 
| Cow position: | chr3:33633818-33633368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 36 | 
| Conread position: | 313-761 | 
| Cow position: | chr3:76609995-76610435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 98, 25 | 
| Conread position: | 313-768 | 
| Cow position: | chr3:6170688-6171157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 54 | 
| Conread position: | 313-768 | 
| Cow position: | chr3:51256153-51256624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 55 | 
| Conread position: | 314-590 | 
| Cow position: | chr3:20074305-20074590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-667 | 
| Cow position: | chr3:6024641-6024276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-692 | 
| Cow position: | chr3:48528244-48528632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 87, 16 | 
| Conread position: | 314-714 | 
| Cow position: | chr3:40205621-40206032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-738 | 
| Cow position: | chr3:16620538-16620100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 34 | 
| Conread position: | 314-738 | 
| Cow position: | chr3:18460478-18460035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 11, 48 | 
| Conread position: | 314-739 | 
| Cow position: | chr3:14613250-14613672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 53 | 
| Conread position: | 314-740 | 
| Cow position: | chr3:5445608-5445172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 48 | 
| Conread position: | 314-740 | 
| Cow position: | chr3:22918740-22919175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 47 | 
| Conread position: | 314-740 | 
| Cow position: | chr3:39878961-39878528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 34 | 
| Conread position: | 314-740 | 
| Cow position: | chr3:68500677-68501113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 55 | 
| Conread position: | 314-744 | 
| Cow position: | chr3:13360665-13361106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-761 | 
| Cow position: | chr3:4135764-4135303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 47 | 
| Conread position: | 314-761 | 
| Cow position: | chr3:18184132-18184583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 47 | 
| Conread position: | 314-761 | 
| Cow position: | chr3:30752801-30753259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-761 | 
| Cow position: | chr3:39231929-39232388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:12797844-12797376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:12931984-12932452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:14922870-14923335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 47 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:19958812-19959280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:26891708-26892176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:28765194-28764737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 31, 47 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:29281977-29282439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 99, 53 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:30329451-30328984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 47 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:41057180-41057645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 32 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:49976309-49975844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 53 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:58336524-58336992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 314-768 | 
| Cow position: | chr3:65536332-65536800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 47 | 
| Conread position: | 315-626 | 
| Cow position: | chr3:578138-578465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 27, 54 | 
| Conread position: | 315-666 | 
| Cow position: | chr3:173721-174079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 54 | 
| Conread position: | 315-689 | 
| Cow position: | chr3:76156790-76157171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 52, 45 | 
| Conread position: | 315-761 | 
| Cow position: | chr3:83699686-83699231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 52 | 
| Conread position: | 316-649 | 
| Cow position: | chr3:54569230-54569554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 96, 51 | 
| Conread position: | 316-654 | 
| Cow position: | chr3:32772280-32772600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 179, 47 | 
| Conread position: | 316-737 | 
| Cow position: | chr3:26974419-26973983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 45 | 
| Conread position: | 316-740 | 
| Cow position: | chr3:77466930-77467351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 51 | 
| Conread position: | 316-768 | 
| Cow position: | chr3:65178591-65179059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 51 | 
| Conread position: | 318-761 | 
| Cow position: | chr3:2627386-2627824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 49 | 
| Conread position: | 318-761 | 
| Cow position: | chr3:11737172-11736711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 103, 23 | 
| Conread position: | 318-761 | 
| Cow position: | chr3:52651733-52651279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 50 | 
| Conread position: | 319-635 | 
| Cow position: | chr3:16897277-16896963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 92, 55 | 
| Conread position: | 319-675 | 
| Cow position: | chr3:63198538-63198896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 163, 49 | 
| Conread position: | 319-687 | 
| Cow position: | chr3:77697246-77696880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 88, 26 | 
| Conread position: | 319-710 | 
| Cow position: | chr3:80564018-80564424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 16 | 
| Conread position: | 320-619 | 
| Cow position: | chr3:37040512-37040806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 24, 49 | 
| Conread position: | 320-758 | 
| Cow position: | chr3:73763408-73762963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 28 | 
| Conread position: | 320-759 | 
| Cow position: | chr3:19216123-19216572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 47 | 
| Conread position: | 320-760 | 
| Cow position: | chr3:80261620-80261182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 11, 78 | 
| Conread position: | 320-761 | 
| Cow position: | chr3:49911563-49911991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 16, 57 | 
| Conread position: | 320-768 | 
| Cow position: | chr3:19797879-19797418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 21 | 
| Conread position: | 321-625 | 
| Cow position: | chr3:74083382-74083687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 61, 46 | 
| Conread position: | 321-755 | 
| Cow position: | chr3:31321549-31321991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 7, 56 | 
| Conread position: | 321-761 | 
| Cow position: | chr3:14647611-14648056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 49 | 
| Conread position: | 321-761 | 
| Cow position: | chr3:42983032-42982586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 13, 50 | 
| Conread position: | 321-768 | 
| Cow position: | chr3:23944191-23944641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 18 | 
| Conread position: | 322-620 | 
| Cow position: | chr3:80277674-80277368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 46 | 
| Conread position: | 322-622 | 
| Cow position: | chr3:40004272-40003975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 22, 26 | 
| Conread position: | 322-628 | 
| Cow position: | chr3:26899611-26899920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 31, 52 | 
| Conread position: | 322-738 | 
| Cow position: | chr3:11944291-11944721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 8, 47 | 
| Conread position: | 323-586 | 
| Cow position: | chr3:10855096-10854835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 44, 53 | 
| Conread position: | 323-768 | 
| Cow position: | chr3:18996444-18996901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 39 | 
| Conread position: | 324-593 | 
| Cow position: | chr3:14922283-14922553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 11, 53 | 
| Conread position: | 324-714 | 
| Cow position: | chr3:58953364-58953759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 45 | 
| Conread position: | 324-768 | 
| Cow position: | chr3:50217219-50217674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 43 | 
| Conread position: | 325-635 | 
| Cow position: | chr3:25997871-25997557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 57, 42 | 
| Conread position: | 325-678 | 
| Cow position: | chr3:58025804-58025448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 8, 25 | 
| Conread position: | 325-681 | 
| Cow position: | chr3:34039399-34039038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 173, 37 | 
| Conread position: | 325-767 | 
| Cow position: | chr3:8002836-8002390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 25, 53 | 
| Conread position: | 326-589 | 
| Cow position: | chr3:1831627-1831372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 83, 41 | 
| Conread position: | 326-603 | 
| Cow position: | chr3:60891491-60891778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 61, 12 | 
| Conread position: | 327-631 | 
| Cow position: | chr3:70336459-70336155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 41, 158 | 
| Conread position: | 327-761 | 
| Cow position: | chr3:52045789-52045343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 40 | 
| Conread position: | 327-761 | 
| Cow position: | chr3:54766202-54766630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 33 | 
| Conread position: | 327-761 | 
| Cow position: | chr3:63176579-63177016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 33 | 
| Conread position: | 327-768 | 
| Cow position: | chr3:16332653-16333103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 84, 20 | 
| Conread position: | 328-745 | 
| Cow position: | chr3:57456176-57456609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 16, 20 | 
| Conread position: | 328-767 | 
| Cow position: | chr3:16884086-16883658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 83, 39 | 
| Conread position: | 329-649 | 
| Cow position: | chr3:20141158-20141480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 67, 32 | 
| Conread position: | 331-759 | 
| Cow position: | chr3:81375017-81374577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 331-761 | 
| Cow position: | chr3:9639778-9639353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 83, 29 | 
| Conread position: | 331-762 | 
| Cow position: | chr3:1299313-1299765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 36 | 
| Conread position: | 331-768 | 
| Cow position: | chr3:68402219-68401757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 75, 44 | 
| Conread position: | 332-740 | 
| Cow position: | chr3:11018688-11019101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 35 | 
| Conread position: | 334-745 | 
| Cow position: | chr3:39970829-39970407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 13 | 
| Conread position: | 334-761 | 
| Cow position: | chr3:73936955-73936525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 33 | 
| Conread position: | 334-768 | 
| Cow position: | chr3:6884382-6884831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 33 | 
| Conread position: | 335-761 | 
| Cow position: | chr3:38747619-38748057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 26 | 
| Conread position: | 335-761 | 
| Cow position: | chr3:77366467-77366037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 74, 12 | 
| Conread position: | 335-768 | 
| Cow position: | chr3:45947286-45946840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 32 | 
| Conread position: | 336-675 | 
| Cow position: | chr3:63276282-63275939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 160, 24 | 
| Conread position: | 336-739 | 
| Cow position: | chr3:66623425-66623840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 26 | 
| Conread position: | 337-768 | 
| Cow position: | chr3:37020975-37020538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 30 | 
| Conread position: | 338-692 | 
| Cow position: | chr3:42050829-42050473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 71, 6 | 
| Conread position: | 338-761 | 
| Cow position: | chr3:2294966-2295392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 75, 37 | 
| Conread position: | 339-582 | 
| Cow position: | chr3:14053546-14053293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 68, 8 | 
| Conread position: | 339-740 | 
| Cow position: | chr3:12872363-12872760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 168, 8 | 
| Conread position: | 341-651 | 
| Cow position: | chr3:49121304-49120985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 14, 47 | 
| Conread position: | 347-760 | 
| Cow position: | chr3:49133149-49132747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 201, 20 | 
| Conread position: | 348-768 | 
| Cow position: | chr3:24886837-24887268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 60, 197 | 
| Conread position: | 349-768 | 
| Cow position: | chr3:70074851-70074420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 18 | 
| Conread position: | 350-747 | 
| Cow position: | chr3:61278004-61278409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 148, 17 | 
| Conread position: | 350-760 | 
| Cow position: | chr3:13494838-13495252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 26, 17 | 
| Conread position: | 350-768 | 
| Cow position: | chr3:9665699-9665269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 18 | 
| Conread position: | 350-768 | 
| Cow position: | chr3:54608754-54608327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 59, 17 | 
| Conread position: | 350-768 | 
| Cow position: | chr3:73956093-73956512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 10 | 
| Conread position: | 351-768 | 
| Cow position: | chr3:48599793-48600221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 57, 16 | 
| Conread position: | 353-590 | 
| Cow position: | chr3:11334605-11334361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 87, 14 | 
| Conread position: | 353-768 | 
| Cow position: | chr3:3372927-3372501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 7 | 
| Conread position: | 354-768 | 
| Cow position: | chr3:12982630-12982202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 142, 196 | 
| Conread position: | 356-735 | 
| Cow position: | chr3:44255339-44254950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 12 | 
| Conread position: | 357-601 | 
| Cow position: | chr3:73765389-73765135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 59, 197 | 
| Conread position: | 359-593 | 
| Cow position: | chr3:12785302-12785058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 48, 44 | 
| Conread position: | 363-761 | 
| Cow position: | chr3:19028184-19027782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 51, 27 | 
| Conread position: | 363-761 | 
| Cow position: | chr3:75479127-75479528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 148, 299 | 
| Conread position: | 364-644 | 
| Cow position: | chr3:12334474-12334190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 47, 114 | 
| Conread position: | 364-714 | 
| Cow position: | chr3:36571168-36570803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 43, 62 | 
| Conread position: | 366-714 | 
| Cow position: | chr3:58027431-58027058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 41, 37 | 
| Conread position: | 366-768 | 
| Cow position: | chr3:80741139-80741556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 37 | 
| Conread position: | 368-768 | 
| Cow position: | chr3:45699936-45700352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 40, 170 | 
| Conread position: | 374-552 | 
| Cow position: | chr3:523487-523669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 35, 6 | 
| Conread position: | 375-601 | 
| Cow position: | chr3:64690664-64690430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 36, 5 | 
| Conread position: | 375-728 | 
| Cow position: | chr3:72776377-72776728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 34, 5 | 
| Conread position: | 375-729 | 
| Cow position: | chr3:6714353-6714719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 32, 5 | 
| Conread position: | 375-739 | 
| Cow position: | chr3:18246304-18245929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 33, 5 | 
| Conread position: | 375-753 | 
| Cow position: | chr3:76901390-76901755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 37, 9 | 
| Conread position: | 375-761 | 
| Cow position: | chr3:15379930-15379535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 36, 5 | 
| Conread position: | 375-761 | 
| Cow position: | chr3:75158070-75157683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 5 | 
| Conread position: | 375-768 | 
| Cow position: | chr3:1622379-1622786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 5 | 
| Conread position: | 375-768 | 
| Cow position: | chr3:5989285-5988877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 5 | 
| Conread position: | 375-768 | 
| Cow position: | chr3:28922274-28922681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 32, 5 | 
| Conread position: | 375-768 | 
| Cow position: | chr3:34037247-34037654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 5 | 
| Conread position: | 376-593 | 
| Cow position: | chr3:26787290-26787505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 101, 8 | 
| Conread position: | 376-768 | 
| Cow position: | chr3:28675094-28675506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 32, 20 | 
| Conread position: | 377-670 | 
| Cow position: | chr3:33692698-33692985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 37, 119 | 
| Conread position: | 380-710 | 
| Cow position: | chr3:70890727-70891068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 27, 155 | 
| Conread position: | 380-761 | 
| Cow position: | chr3:36238200-36238591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 32, 7 | 
| Conread position: | 381-667 | 
| Cow position: | chr3:4080727-4080430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 25, 9 | 
| Conread position: | 381-761 | 
| Cow position: | chr3:66047762-66047386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 27, 143 | 
| Conread position: | 381-761 | 
| Cow position: | chr3:69345701-69345317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 22 | 
| Conread position: | 381-766 | 
| Cow position: | chr3:27212957-27213348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 29, 49 | 
| Conread position: | 384-740 | 
| Cow position: | chr3:13518028-13517668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 20, 28 | 
| Conread position: | 384-745 | 
| Cow position: | chr3:43658603-43658226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 9, 61 | 
| Conread position: | 384-760 | 
| Cow position: | chr3:40231043-40231436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 174 | 
| Conread position: | 384-761 | 
| Cow position: | chr3:43529115-43528729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 25, 48 | 
| Conread position: | 386-761 | 
| Cow position: | chr3:45608132-45608523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 17 | 
| Conread position: | 387-644 | 
| Cow position: | chr3:19962291-19962567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 9, 157 | 
| Conread position: | 387-762 | 
| Cow position: | chr3:48268988-48269369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 79, 14 | 
| Conread position: | 387-768 | 
| Cow position: | chr3:21303295-21302914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 151 | 
| Conread position: | 390-761 | 
| Cow position: | chr3:61955392-61955777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 13 | 
| Conread position: | 391-670 | 
| Cow position: | chr3:16786867-16786590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 18, 66 | 
| Conread position: | 393-761 | 
| Cow position: | chr3:6962280-6962648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 115, 67 | 
| Conread position: | 395-767 | 
| Cow position: | chr3:69299352-69299729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 19, 156 | 
| Conread position: | 397-740 | 
| Cow position: | chr3:30567412-30567771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 155 | 
| Conread position: | 398-651 | 
| Cow position: | chr3:37949503-37949251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 12, 84 | 
| Conread position: | 400-761 | 
| Cow position: | chr3:77187587-77187958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 54 | 
| Conread position: | 405-761 | 
| Cow position: | chr3:8922915-8923269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 31 | 
| Conread position: | 406-768 | 
| Cow position: | chr3:2921940-2922316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 139 | 
| Conread position: | 406-768 | 
| Cow position: | chr3:37151097-37150721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 144 | 
| Conread position: | 406-768 | 
| Cow position: | chr3:45748564-45748940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 139 | 
| Conread position: | 406-768 | 
| Cow position: | chr3:81058217-81057841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 144 | 
| Conread position: | 407-651 | 
| Cow position: | chr3:67021691-67021445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 89, 139 | 
| Conread position: | 407-739 | 
| Cow position: | chr3:20519381-20519722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 63, 138 | 
| Conread position: | 407-739 | 
| Cow position: | chr3:45215478-45215148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 46, 132 | 
| Conread position: | 407-740 | 
| Cow position: | chr3:4991593-4991260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 89, 72 | 
| Conread position: | 407-759 | 
| Cow position: | chr3:64215881-64216246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 143 | 
| Conread position: | 407-768 | 
| Cow position: | chr3:1034399-1034773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 129 | 
| Conread position: | 408-768 | 
| Cow position: | chr3:74700507-74700133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 145 | 
| Conread position: | 410-626 | 
| Cow position: | chr3:54959046-54959271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 88, 135 | 
| Conread position: | 410-628 | 
| Cow position: | chr3:71949414-71949639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 39, 46 | 
| Conread position: | 410-645 | 
| Cow position: | chr3:70200091-70200318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 74, 34 | 
| Conread position: | 410-688 | 
| Cow position: | chr3:62611074-62611358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 81, 144 | 
| Conread position: | 410-739 | 
| Cow position: | chr3:75839541-75839215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 15, 47 | 
| Conread position: | 410-759 | 
| Cow position: | chr3:39857012-39857356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 218, 92 | 
| Conread position: | 410-760 | 
| Cow position: | chr3:58727013-58726673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 116, 67 | 
| Conread position: | 410-761 | 
| Cow position: | chr3:2024326-2024678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 21 | 
| Conread position: | 410-761 | 
| Cow position: | chr3:6854289-6853949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 85, 51 | 
| Conread position: | 410-761 | 
| Cow position: | chr3:13085227-13084865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 91, 136 | 
| Conread position: | 410-768 | 
| Cow position: | chr3:38346351-38346722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 75, 121 | 
| Conread position: | 411-759 | 
| Cow position: | chr3:37009428-37009071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 136 | 
| Conread position: | 411-759 | 
| Cow position: | chr3:62911546-62911198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 99, 71 | 
| Conread position: | 411-761 | 
| Cow position: | chr3:47469077-47468723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 50, 136 | 
| Conread position: | 411-761 | 
| Cow position: | chr3:58034351-58033992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 80, 11 | 
| Conread position: | 413-722 | 
| Cow position: | chr3:48963180-48963499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 75, 23 | 
| Conread position: | 413-739 | 
| Cow position: | chr3:76926729-76927060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 129 | 
| Conread position: | 413-767 | 
| Cow position: | chr3:66134511-66134151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 14, 24 | 
| Conread position: | 413-768 | 
| Cow position: | chr3:56302489-56302123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 73, 136 | 
| Conread position: | 414-666 | 
| Cow position: | chr3:80582174-80582430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 84, 127 | 
| Conread position: | 416-761 | 
| Cow position: | chr3:43045221-43045570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 34, 39 | 
| Conread position: | 417-767 | 
| Cow position: | chr3:35077509-35077145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 299 | 
| Conread position: | 419-761 | 
| Cow position: | chr3:30929845-30930185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 18, 10 | 
| Conread position: | 419-761 | 
| Cow position: | chr3:77295783-77296120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 27, 39 | 
| Conread position: | 422-626 | 
| Cow position: | chr3:53924342-53924137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 21, 51 | 
| Conread position: | 423-768 | 
| Cow position: | chr3:18875353-18874998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 68, 23 | 
| Conread position: | 428-761 | 
| Cow position: | chr3:80759548-80759885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 28, 69 | 
| Conread position: | 431-622 | 
| Cow position: | chr3:78895577-78895394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 90, 60 | 
| Conread position: | 431-682 | 
| Cow position: | chr3:60254138-60254395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 66, 20 | 
| Conread position: | 431-715 | 
| Cow position: | chr3:66272344-66272632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 73, 114 | 
| Conread position: | 434-761 | 
| Cow position: | chr3:84315614-84315945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 92, 68 | 
| Conread position: | 436-651 | 
| Cow position: | chr3:51439544-51439316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 436-761 | 
| Cow position: | chr3:31288202-31287894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 60, 97 | 
| Conread position: | 437-739 | 
| Cow position: | chr3:57835284-57834992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 82, 37 | 
| Conread position: | 437-739 | 
| Cow position: | chr3:66043234-66042923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 56, 30 | 
| Conread position: | 439-761 | 
| Cow position: | chr3:65877360-65877699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 59, 110 | 
| Conread position: | 440-754 | 
| Cow position: | chr3:55108056-55107734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 58, 84 | 
| Conread position: | 444-711 | 
| Cow position: | chr3:74233424-74233695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 53, 91 | 
| Conread position: | 444-740 | 
| Cow position: | chr3:2431673-2431376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 67, 58 | 
| Conread position: | 444-758 | 
| Cow position: | chr3:24871957-24872274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 71, 38 | 
| Conread position: | 445-767 | 
| Cow position: | chr3:66610640-66610324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 68, 33 | 
| Conread position: | 446-626 | 
| Cow position: | chr3:1073938-1074118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 61, 95 | 
| Conread position: | 446-677 | 
| Cow position: | chr3:7563235-7563001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 49, 23 | 
| Conread position: | 446-740 | 
| Cow position: | chr3:49649568-49649869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 45, 6 | 
| Conread position: | 446-760 | 
| Cow position: | chr3:65276781-65276484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 78, 31 | 
| Conread position: | 449-564 | 
| Cow position: | chr3:66650541-66650426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 76, 92 | 
| Conread position: | 449-760 | 
| Cow position: | chr3:72132094-72131794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 55, 69 | 
| Conread position: | 451-715 | 
| Cow position: | chr3:82702815-82703089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 43, 113 | 
| Conread position: | 452-711 | 
| Cow position: | chr3:75176198-75175944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 72, 50 | 
| Conread position: | 452-739 | 
| Cow position: | chr3:74132414-74132125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 49, 22 | 
| Conread position: | 454-767 | 
| Cow position: | chr3:50344983-50344668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 39, 74 | 
| Conread position: | 456-710 | 
| Cow position: | chr3:37909790-37909532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 36, 89 | 
| Conread position: | 456-739 | 
| Cow position: | chr3:3608913-3608637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 43, 11 | 
| Conread position: | 456-761 | 
| Cow position: | chr3:51945909-51945605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 51, 89 | 
| Conread position: | 457-740 | 
| Cow position: | chr3:71230051-71229763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 36, 218 | 
| Conread position: | 459-650 | 
| Cow position: | chr3:5972215-5972022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 39, 86 | 
| Conread position: | 459-658 | 
| Cow position: | chr3:35298967-35298761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 19, 68 | 
| Conread position: | 460-762 | 
| Cow position: | chr3:2537467-2537766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 52, 33 | 
| Conread position: | 461-732 | 
| Cow position: | chr3:16172197-16171919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 38, 85 | 
| Conread position: | 461-761 | 
| Cow position: | chr3:16753000-16752711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 40, 15 | 
| Conread position: | 461-761 | 
| Cow position: | chr3:30908748-30908444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 52, 69 | 
| Conread position: | 461-761 | 
| Cow position: | chr3:56124940-56125240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 33, 20 | 
| Conread position: | 462-768 | 
| Cow position: | chr3:41569585-41569274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 158, 0 | 
| Conread position: | 463-621 | 
| Cow position: | chr3:63238713-63238562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 35, 68 | 
| Conread position: | 470-704 | 
| Cow position: | chr3:22946675-22946434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 19, 70 | 
| Conread position: | 470-735 | 
| Cow position: | chr3:37486645-37486367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 470-761 | 
| Cow position: | chr3:21654174-21654470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 242 | 
| Conread position: | 470-767 | 
| Cow position: | chr3:60868190-60868491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 18, 76 | 
| Conread position: | 470-768 | 
| Cow position: | chr3:23598652-23598353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 25 | 
| Conread position: | 472-761 | 
| Cow position: | chr3:26833392-26833107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 53, 25 | 
| Conread position: | 473-768 | 
| Cow position: | chr3:6383892-6384187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 45, 18 | 
| Conread position: | 473-768 | 
| Cow position: | chr3:35342486-35342181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 18, 73 | 
| Conread position: | 479-651 | 
| Cow position: | chr3:40109056-40108885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 149, 41 | 
| Conread position: | 482-668 | 
| Cow position: | chr3:58958890-58959082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 26, 70 | 
| Conread position: | 482-683 | 
| Cow position: | chr3:57626037-57625838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 26, 61 | 
| Conread position: | 482-737 | 
| Cow position: | chr3:74425389-74425132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 31, 9 | 
| Conread position: | 487-650 | 
| Cow position: | chr3:12755155-12755317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 21, 43 | 
| Conread position: | 488-738 | 
| Cow position: | chr3:53510105-53510373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 20, 68 | 
| Conread position: | 488-761 | 
| Cow position: | chr3:59667987-59668272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 140, 41 | 
| Conread position: | 489-667 | 
| Cow position: | chr3:84152563-84152743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 31, 11 | 
| Conread position: | 489-675 | 
| Cow position: | chr3:7787903-7787708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 19, 124 | 
| Conread position: | 489-761 | 
| Cow position: | chr3:62515520-62515791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 19, 53 | 
| Conread position: | 491-691 | 
| Cow position: | chr3:58255703-58255903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 20, 49 | 
| Conread position: | 491-714 | 
| Cow position: | chr3:10038826-10039046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 17, 47 | 
| Conread position: | 491-761 | 
| Cow position: | chr3:31224692-31224963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 136, 31 | 
| Conread position: | 491-761 | 
| Cow position: | chr3:58078210-58077942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 28, 50 | 
| Conread position: | 493-618 | 
| Cow position: | chr3:21005262-21005388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 20, 44 | 
| Conread position: | 493-653 | 
| Cow position: | chr3:63273554-63273716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 31, 43 | 
| Conread position: | 493-667 | 
| Cow position: | chr3:82275263-82275087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 31, 47 | 
| Conread position: | 493-738 | 
| Cow position: | chr3:56336276-56336027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 20, 49 | 
| Conread position: | 493-739 | 
| Cow position: | chr3:31120421-31120173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 22, 8 | 
| Conread position: | 493-739 | 
| Cow position: | chr3:46062741-46062986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 20, 49 | 
| Conread position: | 493-740 | 
| Cow position: | chr3:40284944-40284693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 49 | 
| Conread position: | 493-748 | 
| Cow position: | chr3:77004733-77004985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 135, 23 | 
| Conread position: | 493-749 | 
| Cow position: | chr3:78200872-78200611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 22, 49 | 
| Conread position: | 493-757 | 
| Cow position: | chr3:76154972-76155238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 20, 100 | 
| Conread position: | 493-757 | 
| Cow position: | chr3:83761934-83761665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 20, 49 | 
| Conread position: | 493-758 | 
| Cow position: | chr3:18761874-18762141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 26, 49 | 
| Conread position: | 493-759 | 
| Cow position: | chr3:73211235-73211503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 47 | 
| Conread position: | 493-761 | 
| Cow position: | chr3:34874466-34874202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 15, 32 | 
| Conread position: | 493-761 | 
| Cow position: | chr3:34952874-34953141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 16, 49 | 
| Conread position: | 493-761 | 
| Cow position: | chr3:68662983-68663246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 19, 29 | 
| Conread position: | 493-761 | 
| Cow position: | chr3:76835734-76835991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 33, 48 | 
| Conread position: | 493-767 | 
| Cow position: | chr3:14717051-14717324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 29 | 
| Conread position: | 493-767 | 
| Cow position: | chr3:15305947-15306220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 124, 13 | 
| Conread position: | 493-768 | 
| Cow position: | chr3:24641577-24641849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 20, 31 | 
| Conread position: | 494-616 | 
| Cow position: | chr3:28634407-28634284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-644 | 
| Cow position: | chr3:72006659-72006504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 35, 85 | 
| Conread position: | 494-651 | 
| Cow position: | chr3:75754920-75754764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 15, 54 | 
| Conread position: | 494-654 | 
| Cow position: | chr3:45576016-45575853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-682 | 
| Cow position: | chr3:62624345-62624156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 19, 29 | 
| Conread position: | 494-714 | 
| Cow position: | chr3:61611277-61611055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 32, 47 | 
| Conread position: | 494-722 | 
| Cow position: | chr3:21111842-21112073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 14, 112 | 
| Conread position: | 494-737 | 
| Cow position: | chr3:35509603-35509851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 16, 48 | 
| Conread position: | 494-739 | 
| Cow position: | chr3:15052688-15052441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-739 | 
| Cow position: | chr3:30003722-30003961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 14, 42 | 
| Conread position: | 494-740 | 
| Cow position: | chr3:6264747-6264993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 18, 48 | 
| Conread position: | 494-740 | 
| Cow position: | chr3:56205944-56206196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 19, 44 | 
| Conread position: | 494-744 | 
| Cow position: | chr3:22490028-22490282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 43 | 
| Conread position: | 494-748 | 
| Cow position: | chr3:49238856-49238616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 30, 47 | 
| Conread position: | 494-761 | 
| Cow position: | chr3:24308388-24308655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 30, 42 | 
| Conread position: | 494-761 | 
| Cow position: | chr3:32412161-32411890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-761 | 
| Cow position: | chr3:51032582-51032853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 19, 50 | 
| Conread position: | 494-761 | 
| Cow position: | chr3:52150707-52150436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-761 | 
| Cow position: | chr3:52652943-52652670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 494-761 | 
| Cow position: | chr3:70730705-70730976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 43 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:1437970-1438248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:1516255-1515978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:8330681-8330961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 19, 42 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:10449064-10448784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:13513477-13513217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 266, 46 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:18052516-18052236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:18111737-18111458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 134, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:19692089-19691809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:19978194-19977914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:26801490-26801770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 19, 43 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:27687957-27687677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:29461779-29461499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:32356156-32356436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 43 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:32769216-32769496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 19, 43 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:45097645-45097925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:49389693-49389413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:51603043-51603323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 19, 48 | 
| Conread position: | 494-768 | 
| Cow position: | chr3:70893980-70894260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 19, 43 | 
| Conread position: | 495-740 | 
| Cow position: | chr3:33269081-33268839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 18, 47 | 
| Conread position: | 495-747 | 
| Cow position: | chr3:36403529-36403784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 18, 42 | 
| Conread position: | 495-761 | 
| Cow position: | chr3:15557189-15557461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 6, 42 | 
| Conread position: | 495-761 | 
| Cow position: | chr3:20342434-20342702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 8, 47 | 
| Conread position: | 495-761 | 
| Cow position: | chr3:45342184-45342449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 132, 29 | 
| Conread position: | 495-768 | 
| Cow position: | chr3:60388893-60389167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 23, 9 | 
| Conread position: | 496-621 | 
| Cow position: | chr3:82937834-82937958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 29, 17 | 
| Conread position: | 496-692 | 
| Cow position: | chr3:61262082-61262281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 11, 45 | 
| Conread position: | 496-759 | 
| Cow position: | chr3:54653752-54653485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 46 | 
| Conread position: | 496-761 | 
| Cow position: | chr3:27545087-27544832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 12, 48 | 
| Conread position: | 496-766 | 
| Cow position: | chr3:53568204-53568475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 14, 46 | 
| Conread position: | 497-768 | 
| Cow position: | chr3:471193-470926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 130, 31 | 
| Conread position: | 498-760 | 
| Cow position: | chr3:11789374-11789638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 15, 39 | 
| Conread position: | 498-761 | 
| Cow position: | chr3:14451689-14451422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 15, 46 | 
| Conread position: | 498-768 | 
| Cow position: | chr3:38769324-38769062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 27, 43 | 
| Conread position: | 499-761 | 
| Cow position: | chr3:79094810-79094557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 9, 43 | 
| Conread position: | 499-768 | 
| Cow position: | chr3:30609702-30609977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 14, 38 | 
| Conread position: | 499-768 | 
| Cow position: | chr3:32619601-32619327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 14, 43 | 
| Conread position: | 499-768 | 
| Cow position: | chr3:67625036-67624762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 37 | 
| Conread position: | 500-738 | 
| Cow position: | chr3:73513291-73513050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 26, 92 | 
| Conread position: | 500-759 | 
| Cow position: | chr3:72105045-72104783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 25, 41 | 
| Conread position: | 500-761 | 
| Cow position: | chr3:41315531-41315788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 122, 27 | 
| Conread position: | 501-740 | 
| Cow position: | chr3:17709584-17709826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 501-761 | 
| Cow position: | chr3:12978877-12979138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 11, 41 | 
| Conread position: | 502-621 | 
| Cow position: | chr3:51857292-51857412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 11, 40 | 
| Conread position: | 502-761 | 
| Cow position: | chr3:26750685-26750423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 40 | 
| Conread position: | 503-684 | 
| Cow position: | chr3:27673626-27673444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 19, 29 | 
| Conread position: | 503-735 | 
| Cow position: | chr3:3269249-3269478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 6, 39 | 
| Conread position: | 503-761 | 
| Cow position: | chr3:49429237-49428976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 12, 39 | 
| Conread position: | 503-768 | 
| Cow position: | chr3:56524693-56524425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 26, 38 | 
| Conread position: | 504-704 | 
| Cow position: | chr3:19792715-19792517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 20, 39 | 
| Conread position: | 504-761 | 
| Cow position: | chr3:32879191-32878936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 38, 17 | 
| Conread position: | 504-761 | 
| Cow position: | chr3:81697121-81697362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 6, 32 | 
| Conread position: | 505-715 | 
| Cow position: | chr3:22908604-22908396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 505-751 | 
| Cow position: | chr3:297921-297676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 21, 36 | 
| Conread position: | 506-680 | 
| Cow position: | chr3:49286434-49286609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 12, 35 | 
| Conread position: | 507-621 | 
| Cow position: | chr3:29460851-29460736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 11, 34 | 
| Conread position: | 507-687 | 
| Cow position: | chr3:68584157-68583976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 121, 17 | 
| Conread position: | 507-740 | 
| Cow position: | chr3:23735852-23735615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 507-744 | 
| Cow position: | chr3:71225865-71225624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 19, 34 | 
| Conread position: | 507-758 | 
| Cow position: | chr3:62882934-62883187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 9, 40 | 
| Conread position: | 507-761 | 
| Cow position: | chr3:6799749-6799503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 17, 33 | 
| Conread position: | 507-761 | 
| Cow position: | chr3:14748331-14748075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 29, 22 | 
| Conread position: | 507-761 | 
| Cow position: | chr3:25690991-25691239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 121, 21 | 
| Conread position: | 507-761 | 
| Cow position: | chr3:49732364-49732102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 12, 34 | 
| Conread position: | 507-761 | 
| Cow position: | chr3:50204995-50205249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 12, 34 | 
| Conread position: | 507-761 | 
| Cow position: | chr3:68617047-68617305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 75, 33 | 
| Conread position: | 507-761 | 
| Cow position: | chr3:74847499-74847250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 507-768 | 
| Cow position: | chr3:26532553-26532301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 19, 34 | 
| Conread position: | 507-768 | 
| Cow position: | chr3:29573662-29573396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 11, 34 | 
| Conread position: | 507-768 | 
| Cow position: | chr3:34015990-34016256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 507-768 | 
| Cow position: | chr3:42976895-42976629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 11, 34 | 
| Conread position: | 507-768 | 
| Cow position: | chr3:46260788-46261053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 10, 29 | 
| Conread position: | 507-768 | 
| Cow position: | chr3:47630304-47630052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 508-677 | 
| Cow position: | chr3:70322119-70321947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 16, 33 | 
| Conread position: | 509-686 | 
| Cow position: | chr3:16886960-16886780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 15, 32 | 
| Conread position: | 509-761 | 
| Cow position: | chr3:16739094-16739340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 17, 32 | 
| Conread position: | 509-761 | 
| Cow position: | chr3:43008176-43007921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 63 | 
| Conread position: | 509-761 | 
| Cow position: | chr3:74140469-74140201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 17, 32 | 
| Conread position: | 510-740 | 
| Cow position: | chr3:70469808-70469582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 20, 31 | 
| Conread position: | 510-760 | 
| Cow position: | chr3:19469945-19470192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 510-761 | 
| Cow position: | chr3:3984547-3984801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 14, 31 | 
| Conread position: | 513-649 | 
| Cow position: | chr3:25076228-25076367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 13, 28 | 
| Conread position: | 513-762 | 
| Cow position: | chr3:80857942-80858187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 108, 29 | 
| Conread position: | 514-739 | 
| Cow position: | chr3:11410848-11410620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 11, 27 | 
| Conread position: | 516-739 | 
| Cow position: | chr3:3953757-3953981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 112, 24 | 
| Conread position: | 516-768 | 
| Cow position: | chr3:28669263-28669003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 105, 24 | 
| Conread position: | 518-738 | 
| Cow position: | chr3:73459487-73459709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 108, 22 | 
| Conread position: | 518-761 | 
| Cow position: | chr3:80054271-80054030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 110, 21 | 
| Conread position: | 518-768 | 
| Cow position: | chr3:28871741-28871487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 104, 22 | 
| Conread position: | 518-768 | 
| Cow position: | chr3:56718692-56718451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 109, 21 | 
| Conread position: | 519-739 | 
| Cow position: | chr3:1498140-1498363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 5, 42 | 
| Conread position: | 522-760 | 
| Cow position: | chr3:1349343-1349586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 19, 57 | 
| Conread position: | 522-761 | 
| Cow position: | chr3:29328498-29328257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 106, 18 | 
| Conread position: | 523-761 | 
| Cow position: | chr3:11819227-11819466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 98, 17 | 
| Conread position: | 523-761 | 
| Cow position: | chr3:75164606-75164377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 99, 17 | 
| Conread position: | 523-766 | 
| Cow position: | chr3:43102939-43103180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 523-768 | 
| Cow position: | chr3:24558139-24557890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 105, 17 | 
| Conread position: | 524-727 | 
| Cow position: | chr3:78204388-78204596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 25, 177 | 
| Conread position: | 524-761 | 
| Cow position: | chr3:59691181-59691420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 104, 21 | 
| Conread position: | 525-722 | 
| Cow position: | chr3:25653955-25653760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 100, 149 | 
| Conread position: | 525-761 | 
| Cow position: | chr3:1750045-1749807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 102, 15 | 
| Conread position: | 526-650 | 
| Cow position: | chr3:60620540-60620417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 526-761 | 
| Cow position: | chr3:601161-601391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 96, 155 | 
| Conread position: | 526-761 | 
| Cow position: | chr3:49253256-49253022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 101, 15 | 
| Conread position: | 528-761 | 
| Cow position: | chr3:65216725-65216959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 98, 12 | 
| Conread position: | 529-681 | 
| Cow position: | chr3:39945513-39945359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 98, 132 | 
| Conread position: | 530-740 | 
| Cow position: | chr3:6079058-6078848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 50, 12 | 
| Conread position: | 533-761 | 
| Cow position: | chr3:27454115-27453887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 534-761 | 
| Cow position: | chr3:7467529-7467293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 34, 205 | 
| Conread position: | 534-761 | 
| Cow position: | chr3:22739471-22739239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 60, 174 | 
| Conread position: | 535-738 | 
| Cow position: | chr3:47737618-47737421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 535-761 | 
| Cow position: | chr3:18448534-18448763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 535-762 | 
| Cow position: | chr3:77623643-77623872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 91, 67 | 
| Conread position: | 535-768 | 
| Cow position: | chr3:11122724-11122962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 536-739 | 
| Cow position: | chr3:62827325-62827123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 144, 0 | 
| Conread position: | 536-744 | 
| Cow position: | chr3:49286610-49286821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 536-761 | 
| Cow position: | chr3:25802622-25802845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 91, 126 | 
| Conread position: | 536-761 | 
| Cow position: | chr3:27580321-27580103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 536-768 | 
| Cow position: | chr3:53787946-53787710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 538-714 | 
| Cow position: | chr3:63147889-63147711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 84, 159 | 
| Conread position: | 539-761 | 
| Cow position: | chr3:73687122-73686899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 88, 79 | 
| Conread position: | 539-768 | 
| Cow position: | chr3:63000001-62999766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 540-739 | 
| Cow position: | chr3:27531358-27531160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 83, 114 | 
| Conread position: | 540-761 | 
| Cow position: | chr3:2273413-2273637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 121, 70 | 
| Conread position: | 540-768 | 
| Cow position: | chr3:64281649-64281430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 220, 83 | 
| Conread position: | 541-759 | 
| Cow position: | chr3:56705300-56705079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 541-768 | 
| Cow position: | chr3:14145127-14144895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 541-768 | 
| Cow position: | chr3:18907315-18907546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 87, 18 | 
| Conread position: | 541-768 | 
| Cow position: | chr3:28471828-28472060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 541-768 | 
| Cow position: | chr3:78921314-78921545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 542-740 | 
| Cow position: | chr3:48240899-48241099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 85, 27 | 
| Conread position: | 542-745 | 
| Cow position: | chr3:36128519-36128724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 85, 168 | 
| Conread position: | 542-761 | 
| Cow position: | chr3:30463952-30463738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 542-761 | 
| Cow position: | chr3:69419631-69419409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 21, 7 | 
| Conread position: | 543-761 | 
| Cow position: | chr3:8053483-8053279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 68, 20 | 
| Conread position: | 543-761 | 
| Cow position: | chr3:54506066-54506290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 543-768 | 
| Cow position: | chr3:51338721-51338491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 544-740 | 
| Cow position: | chr3:59648549-59648746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 83, 21 | 
| Conread position: | 544-761 | 
| Cow position: | chr3:26474441-26474660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 83, 25 | 
| Conread position: | 544-761 | 
| Cow position: | chr3:83443357-83443134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 544-768 | 
| Cow position: | chr3:19137033-19136804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 545-740 | 
| Cow position: | chr3:42451589-42451781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 83, 23 | 
| Conread position: | 546-761 | 
| Cow position: | chr3:6068064-6068282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 547-740 | 
| Cow position: | chr3:11384966-11385162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 547-761 | 
| Cow position: | chr3:8605114-8604901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 81, 136 | 
| Conread position: | 547-761 | 
| Cow position: | chr3:55110542-55110335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 140, 94 | 
| Conread position: | 548-710 | 
| Cow position: | chr3:46856925-46856759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 548-768 | 
| Cow position: | chr3:40194336-40194556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 212, 74 | 
| Conread position: | 549-758 | 
| Cow position: | chr3:18670481-18670694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 549-759 | 
| Cow position: | chr3:27784421-27784634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 549-761 | 
| Cow position: | chr3:53223363-53223148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 549-768 | 
| Cow position: | chr3:12076411-12076191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 211, 170 | 
| Conread position: | 549-768 | 
| Cow position: | chr3:49930784-49930560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 550-739 | 
| Cow position: | chr3:41076751-41076939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 78, 65 | 
| Conread position: | 551-761 | 
| Cow position: | chr3:67165224-67165440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 552-768 | 
| Cow position: | chr3:17696738-17696516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 552-768 | 
| Cow position: | chr3:52011234-52011455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 553-768 | 
| Cow position: | chr3:39949615-39949407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 69, 33 | 
| Conread position: | 554-761 | 
| Cow position: | chr3:7567115-7566906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 73, 113 | 
| Conread position: | 554-766 | 
| Cow position: | chr3:46333189-46332975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 74, 7 | 
| Conread position: | 554-768 | 
| Cow position: | chr3:68302605-68302827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 556-768 | 
| Cow position: | chr3:12712914-12712697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 558-744 | 
| Cow position: | chr3:66632058-66631869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 558-768 | 
| Cow position: | chr3:15233692-15233477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 558-768 | 
| Cow position: | chr3:24344393-24344178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 559-761 | 
| Cow position: | chr3:74849738-74849536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 69, 122 | 
| Conread position: | 560-761 | 
| Cow position: | chr3:69895764-69895559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 561-740 | 
| Cow position: | chr3:42595477-42595312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 561-747 | 
| Cow position: | chr3:34996434-34996252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 61, 106 | 
| Conread position: | 561-747 | 
| Cow position: | chr3:35009610-35009797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 61, 97 | 
| Conread position: | 561-761 | 
| Cow position: | chr3:14258610-14258409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 68, 179 | 
| Conread position: | 562-740 | 
| Cow position: | chr3:69962407-69962226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 562-761 | 
| Cow position: | chr3:15153126-15153327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 66, 43 | 
| Conread position: | 562-761 | 
| Cow position: | chr3:19827985-19827785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 66, 165 | 
| Conread position: | 563-768 | 
| Cow position: | chr3:7386228-7386018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 564-761 | 
| Cow position: | chr3:2674345-2674545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 25, 8 | 
| Conread position: | 567-752 | 
| Cow position: | chr3:66650146-66649956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 61, 44 | 
| Conread position: | 567-757 | 
| Cow position: | chr3:58541228-58541035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 569-762 | 
| Cow position: | chr3:82397939-82398135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 569-768 | 
| Cow position: | chr3:43825361-43825157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 569-768 | 
| Cow position: | chr3:61173997-61174201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 569-768 | 
| Cow position: | chr3:64877368-64877162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 571-761 | 
| Cow position: | chr3:74853187-74853374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 88, 116 | 
| Conread position: | 572-761 | 
| Cow position: | chr3:43424620-43424806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 12, 57 | 
| Conread position: | 577-768 | 
| Cow position: | chr3:3596421-3596225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 579-768 | 
| Cow position: | chr3:28933395-28933589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 580-761 | 
| Cow position: | chr3:53407928-53407743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 588-768 | 
| Cow position: | chr3:53384950-53384766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 40, 79 | 
| Conread position: | 596-768 | 
| Cow position: | chr3:78472482-78472305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 599-759 | 
| Cow position: | chr3:40568681-40568518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 599-759 | 
| Cow position: | chr3:78261202-78261039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 599-768 | 
| Cow position: | chr3:6754197-6754370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 29, 134 | 
| Conread position: | 600-768 | 
| Cow position: | chr3:56976642-56976469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 609-745 | 
| Cow position: | chr3:15685547-15685407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
Show alignments to all cow chromosomes.
