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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8051I23.5
        

               
Conread position:
               
1-159
               

               
Cow position:
               
chr9:11850900-11850744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr9:24918325-24918161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr9:61198393-61198228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr9:18539626-18539792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
142, 67
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr9:10325908-10326076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr9:10939687-10939856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr9:13848579-13848408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr9:6252531-6252703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr9:6764809-6764634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
142, 129
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr9:47005705-47005880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr9:7005704-7005880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr9:21412275-21412449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr9:22655775-22655950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr9:37158647-37158471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr9:28658086-28657908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:3545790-3545972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:3756868-3756685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:5517149-5517328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:5627782-5627964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:7059087-7058905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:8098117-8098295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
88, 122
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:10856983-10857165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:11504943-11505125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
140, 174
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:12260401-12260220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:12285744-12285563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:17303010-17302833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:19156330-19156147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:22319453-22319270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:30675038-30675220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:31810540-31810722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 133
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:32972330-32972512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:34059670-34059488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:38633743-38633927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:40143381-40143206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:59479885-59479703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr9:27781949-27781766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:1640218-1640409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:19078833-19079019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:34761716-34761907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:62131001-62131191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr9:44518707-44518514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 78
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr9:27486948-27486746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 179
               

               
Conread position:
               
1-761
               

               
Cow position:
               
chr9:1516244-1517032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
810
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 365
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr9:7844822-7844657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr9:13472597-13472425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr9:64049239-64049411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr9:1099558-1099733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr9:28785308-28785484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr9:38679082-38679258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr9:56176734-56176910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr9:2864597-2864424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr9:2495777-2495599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr9:30401247-30401425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 92
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr9:2856808-2856988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr9:27897970-27898150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 33
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr9:28681164-28681344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr9:47044911-47045091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:174809-174628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:1071320-1071139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:1998331-1998155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
141, 84
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:2484653-2484472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:2873438-2873619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:3806561-3806739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:4940535-4940354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:6365341-6365522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
68, 78
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:6707954-6707773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:7104267-7104086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:9021641-9021460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:9958222-9958039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:13312529-13312708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:14003001-14003182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:17007995-17007814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:17017718-17017899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:18109665-18109847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:26055010-26055191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:30139644-30139466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:31417551-31417371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 37
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:33843288-33843468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
141, 37
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:34238795-34238614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:37174441-37174260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:43225737-43225556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:44168553-44168734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:46627275-46627456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:47171016-47171198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
114, 135
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:50840397-50840577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 57
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:54413644-54413464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 80
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:54459538-54459357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
73, 77
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:62444011-62443832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
139, 114
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr9:64012265-64012084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr9:6979166-6979356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr9:7458761-7458570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr9:26280804-26280996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr9:34946050-34945860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr9:59431465-59431655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr9:23297942-23297753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr9:9491976-9491801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:2548730-2548550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
140, 133
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:31124041-31124221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:44203115-44202935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
140, 133
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:45876483-45876663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
140, 133
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:59196822-59197001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
140, 95
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr9:28702415-28702636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
134, 118
               

               
Conread position:
               
4-168
               

               
Cow position:
               
chr9:9016040-9016206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr9:5006939-5007111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr9:19303091-19302917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr9:41313075-41312901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr9:46667832-46667658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:1249031-1248852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:1837921-1838100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:5328385-5328211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 94
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:5430433-5430611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:5452674-5452495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:6550143-6550322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:9210109-9210288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:9871905-9872084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:13187170-13187349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:18830706-18830883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:26325712-26325891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:27038074-27038252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
137, 75
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:28024785-28024964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:37181828-37182007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:37253370-37253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:43496100-43496279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:45791814-45791993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:48795326-48795147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:51178702-51178524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
139, 74
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:52401925-52402104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr9:52526117-52526296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr9:12250956-12251131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr9:29787711-29787523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
4-768
               

               
Cow position:
               
chr9:43493910-43494707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 236
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr9:1519559-1519737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr9:2208701-2208524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr9:16178554-16178732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr9:18506857-18506679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr9:42570181-42570359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
12-170
               

               
Cow position:
               
chr9:17301153-17300993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
14-181
               

               
Cow position:
               
chr9:59496207-59496038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 122
               

               
Conread position:
               
17-176
               

               
Cow position:
               
chr9:50326676-50326836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 119
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chr9:19545490-19545656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
126, 119
               

               
Conread position:
               
22-181
               

               
Cow position:
               
chr9:22570089-22570250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 114
               

               
Conread position:
               
22-186
               

               
Cow position:
               
chr9:56561735-56561901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 144
               

               
Conread position:
               
35-181
               

               
Cow position:
               
chr9:3960185-3960038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
35-181
               

               
Cow position:
               
chr9:8952036-8951888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
108, 99
               

               
Conread position:
               
35-181
               

               
Cow position:
               
chr9:62818224-62818076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 101
               

               
Conread position:
               
35-190
               

               
Cow position:
               
chr9:46162690-46162531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
41-176
               

               
Cow position:
               
chr9:51010564-51010701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 95
               

               
Conread position:
               
188-729
               

               
Cow position:
               
chr9:56862102-56861563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
188-759
               

               
Cow position:
               
chr9:2284746-2285298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
189-340
               

               
Cow position:
               
chr9:12251041-12251196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
189-496
               

               
Cow position:
               
chr9:29787613-29787306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
45, 174
               

               
Conread position:
               
189-563
               

               
Cow position:
               
chr9:1850579-1850211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
189-596
               

               
Cow position:
               
chr9:57677822-57678237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
189-620
               

               
Cow position:
               
chr9:46667734-46667292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
189-640
               

               
Cow position:
               
chr9:13117515-13117075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
189-642
               

               
Cow position:
               
chr9:9491878-9491421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
189-651
               

               
Cow position:
               
chr9:49981568-49982037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
189-655
               

               
Cow position:
               
chr9:865872-865396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
77, 105
               

               
Conread position:
               
189-675
               

               
Cow position:
               
chr9:28702514-28703012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
189-740
               

               
Cow position:
               
chr9:3806660-3807221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
189-740
               

               
Cow position:
               
chr9:20941536-20942106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
189-753
               

               
Cow position:
               
chr9:30439462-30440027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
189-759
               

               
Cow position:
               
chr9:19156228-19155637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
189-759
               

               
Cow position:
               
chr9:21412376-21412949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
189-768
               

               
Cow position:
               
chr9:3061651-3062246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
189-768
               

               
Cow position:
               
chr9:9327012-9326442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
189-768
               

               
Cow position:
               
chr9:19078929-19079511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
189-768
               

               
Cow position:
               
chr9:51010625-51011166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
190-333
               

               
Cow position:
               
chr9:10760010-10760156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr9:47110327-47110528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
190-444
               

               
Cow position:
               
chr9:39728545-39728288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 177
               

               
Conread position:
               
190-496
               

               
Cow position:
               
chr9:52408265-52407951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-504
               

               
Cow position:
               
chr9:2214204-2214520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 160
               

               
Conread position:
               
190-508
               

               
Cow position:
               
chr9:31411664-31411352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
221, 44
               

               
Conread position:
               
190-510
               

               
Cow position:
               
chr9:46525141-46524833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
190-511
               

               
Cow position:
               
chr9:33056848-33057170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr9:11744622-11744250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 160
               

               
Conread position:
               
190-564
               

               
Cow position:
               
chr9:13187269-13187654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-574
               

               
Cow position:
               
chr9:2873539-2873935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 175
               

               
Conread position:
               
190-590
               

               
Cow position:
               
chr9:17302908-17302504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
190-592
               

               
Cow position:
               
chr9:28657987-28657579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
190-593
               

               
Cow position:
               
chr9:32985449-32985848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
190-593
               

               
Cow position:
               
chr9:54459437-54459023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-600
               

               
Cow position:
               
chr9:4127877-4127483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
190-600
               

               
Cow position:
               
chr9:5517248-5517661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
190-609
               

               
Cow position:
               
chr9:8282203-8281779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-618
               

               
Cow position:
               
chr9:35486-35068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
190-621
               

               
Cow position:
               
chr9:5608700-5608275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
190-621
               

               
Cow position:
               
chr9:18830803-18831239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-626
               

               
Cow position:
               
chr9:63563479-63563931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-628
               

               
Cow position:
               
chr9:49683869-49683427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
190-651
               

               
Cow position:
               
chr9:2527352-2527816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-666
               

               
Cow position:
               
chr9:13312628-13313113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-672
               

               
Cow position:
               
chr9:47005807-47006294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-677
               

               
Cow position:
               
chr9:1938968-1938478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-677
               

               
Cow position:
               
chr9:43643574-43643080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
190-681
               

               
Cow position:
               
chr9:9649256-9649742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
190-684
               

               
Cow position:
               
chr9:54413544-54413046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-687
               

               
Cow position:
               
chr9:4284288-4284795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 137
               

               
Conread position:
               
190-687
               

               
Cow position:
               
chr9:20684119-20684621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
190-695
               

               
Cow position:
               
chr9:43496199-43496718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-714
               

               
Cow position:
               
chr9:35624379-35624917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-714
               

               
Cow position:
               
chr9:58747753-58747220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
190-728
               

               
Cow position:
               
chr9:3411829-3411283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
190-732
               

               
Cow position:
               
chr9:64012164-64011609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-736
               

               
Cow position:
               
chr9:7458660-7458100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
190-738
               

               
Cow position:
               
chr9:5007038-5007592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr9:2834935-2834374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr9:5059017-5058474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr9:5887326-5886771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 117
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr9:6365442-6366000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr9:10111060-10111587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr9:18710558-18711120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr9:22442556-22443095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr9:30281951-30281394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-739
               

               
Cow position:
               
chr9:54995705-54996251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:791247-790692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:3756766-3756219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:16178652-16179213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:17633552-17634117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:27486846-27486294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:37158545-37157983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:38633845-38634407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:40143286-40142731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:42570279-42570844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 180
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:42868808-42868243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
190-740
               

               
Cow position:
               
chr9:64562276-64562815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-744
               

               
Cow position:
               
chr9:5430531-5431099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-748
               

               
Cow position:
               
chr9:3960118-3959565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
190-756
               

               
Cow position:
               
chr9:13848477-13847904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 180
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:2864500-2863929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:6252633-6253212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:7058985-7058407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:9016139-9016719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:12285642-12285059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:18109767-18110349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:18506759-18506181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:22655876-22656446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:27781847-27781264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:28024884-28025468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:31810642-31811225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:32972432-32973013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:34059568-34058986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:51178604-51178005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-759
               

               
Cow position:
               
chr9:55031570-55032150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:1062630-1062046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:1099659-1100234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:1404875-1405441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:2208604-2208023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:2222734-2223291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:2548630-2548046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:3217269-3216689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:9958119-9957542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:11286826-11286251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:11850800-11850217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 154
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:13180985-13181559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:23297842-23297278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:29193503-29192924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:29337970-29338538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:34567713-34568287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:36829987-36829402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:42902370-42901799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:45876583-45877168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:46627376-46627960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:47263102-47263683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:48375072-48374514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:56561816-56562395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:59479783-59479208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:62131103-62131678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 174
               

               
Conread position:
               
190-761
               

               
Cow position:
               
chr9:62734097-62733549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
190-762
               

               
Cow position:
               
chr9:2856909-2857494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-762
               

               
Cow position:
               
chr9:30675140-30675720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
190-763
               

               
Cow position:
               
chr9:3933047-3932461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
190-767
               

               
Cow position:
               
chr9:16259500-16260077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:174708-174116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:772181-771590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:1071219-1070625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:1640320-1640923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 175
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:1838020-1838610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:1983440-1984017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:3052330-3052923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:3997695-3997114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:4940434-4939835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:5328287-5327709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:5452575-5451981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:5627884-5628477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:6707853-6707252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:7005806-7006398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:7104166-7103572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:9559057-9558468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:10857085-10857689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:14045738-14046321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:15052824-15052240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:17017819-17018413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:17061292-17060699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:19545576-19546177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:22570170-22570762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:22803587-22803003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:24918223-24917630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:27038172-27038772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 185
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:28681265-28681859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:28785409-28786000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:34238694-34238096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:35565474-35564880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:37174340-37173746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:37253469-37254063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:39303488-39302894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:44203015-44202421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:47045012-47045606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:47171117-47171712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:48795227-48794637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:50326762-50327360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:50840497-50841105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:52002046-52001447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:59496118-59495525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:59540514-59541084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 35
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:60409467-60410061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
190-768
               

               
Cow position:
               
chr9:62818156-62817562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
191-687
               

               
Cow position:
               
chr9:48797096-48796597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 173
               

               
Conread position:
               
191-739
               

               
Cow position:
               
chr9:873722-874281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
191-756
               

               
Cow position:
               
chr9:40531-39955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 180
               

               
Conread position:
               
191-768
               

               
Cow position:
               
chr9:13472497-13471933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
192-589
               

               
Cow position:
               
chr9:26123781-26124193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
196-399
               

               
Cow position:
               
chr9:42216426-42216627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
196-486
               

               
Cow position:
               
chr9:27450781-27450493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
213, 118
               

               
Conread position:
               
196-629
               

               
Cow position:
               
chr9:36088605-36089033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
196-650
               

               
Cow position:
               
chr9:2618726-2618246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-651
               

               
Cow position:
               
chr9:13492827-13493269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
196-681
               

               
Cow position:
               
chr9:51692549-51692058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
196-685
               

               
Cow position:
               
chr9:33068422-33067920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 27
               

               
Conread position:
               
196-706
               

               
Cow position:
               
chr9:30401353-30401865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-709
               

               
Cow position:
               
chr9:4552879-4553392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
196-714
               

               
Cow position:
               
chr9:43538561-43538048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 29
               

               
Conread position:
               
196-715
               

               
Cow position:
               
chr9:39032439-39032980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
196-731
               

               
Cow position:
               
chr9:23421657-23422215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
196-739
               

               
Cow position:
               
chr9:10567294-10566736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-740
               

               
Cow position:
               
chr9:2495670-2495113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
196-740
               

               
Cow position:
               
chr9:4647570-4647033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
196-740
               

               
Cow position:
               
chr9:6764701-6764142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-740
               

               
Cow position:
               
chr9:6979273-6979832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
196-740
               

               
Cow position:
               
chr9:56166352-56165802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
196-748
               

               
Cow position:
               
chr9:34900538-34901110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
196-748
               

               
Cow position:
               
chr9:36844858-36844309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-757
               

               
Cow position:
               
chr9:44580152-44579580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 179
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:4673127-4673705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:12161666-12162249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:13971302-13971823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:20988370-20988944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:23859626-23859053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:26325817-26326395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:29765364-29765923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:31092854-31092302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:33845089-33845650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 168
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:34690459-34689884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:34917690-34918255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:34945943-34945376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:37168543-37169110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 26
               

               
Conread position:
               
196-761
               

               
Cow position:
               
chr9:59431573-59432151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
196-766
               

               
Cow position:
               
chr9:31417445-31416861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-768
               

               
Cow position:
               
chr9:1307281-1306691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-768
               

               
Cow position:
               
chr9:58615624-58615036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
197-761
               

               
Cow position:
               
chr9:18071555-18072130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
198-594
               

               
Cow position:
               
chr9:50062864-50062459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
198-758
               

               
Cow position:
               
chr9:33843396-33843970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
198-759
               

               
Cow position:
               
chr9:1991479-1990906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
198-768
               

               
Cow position:
               
chr9:777740-777152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
198-768
               

               
Cow position:
               
chr9:6886668-6887237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
199-626
               

               
Cow position:
               
chr9:50728143-50727725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
200-564
               

               
Cow position:
               
chr9:29300934-29300581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
145, 52
               

               
Conread position:
               
200-761
               

               
Cow position:
               
chr9:26087927-26087361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
200-761
               

               
Cow position:
               
chr9:28774192-28773616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
201-762
               

               
Cow position:
               
chr9:50688969-50689544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 174
               

               
Conread position:
               
201-768
               

               
Cow position:
               
chr9:62669474-62668893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
202-523
               

               
Cow position:
               
chr9:54996950-54997270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
202-586
               

               
Cow position:
               
chr9:8601812-8601436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 161
               

               
Conread position:
               
202-621
               

               
Cow position:
               
chr9:21461543-21461961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
202-739
               

               
Cow position:
               
chr9:1519668-1520209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
204-761
               

               
Cow position:
               
chr9:31061770-31062327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
205-760
               

               
Cow position:
               
chr9:372150-371585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
171, 66
               

               
Conread position:
               
209-768
               

               
Cow position:
               
chr9:7830819-7830236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
210-646
               

               
Cow position:
               
chr9:40130986-40131435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
213-768
               

               
Cow position:
               
chr9:12848214-12847655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
214-715
               

               
Cow position:
               
chr9:5533840-5533331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
215-702
               

               
Cow position:
               
chr9:24423614-24424113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 146
               

               
Conread position:
               
215-738
               

               
Cow position:
               
chr9:26100381-26099866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
216-621
               

               
Cow position:
               
chr9:6329316-6328907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
221-768
               

               
Cow position:
               
chr9:61739951-61739396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
223-484
               

               
Cow position:
               
chr9:33477990-33478252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
225-761
               

               
Cow position:
               
chr9:38547442-38546903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
226-574
               

               
Cow position:
               
chr9:24978581-24978232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
227-349
               

               
Cow position:
               
chr9:52723554-52723676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
117, 52
               

               
Conread position:
               
227-591
               

               
Cow position:
               
chr9:15981807-15982178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
182, 126
               

               
Conread position:
               
229-768
               

               
Cow position:
               
chr9:22755819-22755280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
231-681
               

               
Cow position:
               
chr9:26576809-26577260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
183, 48
               

               
Conread position:
               
231-702
               

               
Cow position:
               
chr9:9515779-9516250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
231-739
               

               
Cow position:
               
chr9:5840040-5839515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
231-740
               

               
Cow position:
               
chr9:40316244-40316751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
111, 116
               

               
Conread position:
               
231-761
               

               
Cow position:
               
chr9:3075250-3075786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
231-761
               

               
Cow position:
               
chr9:46670039-46670568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 117
               

               
Conread position:
               
237-559
               

               
Cow position:
               
chr9:38691504-38691809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
238-739
               

               
Cow position:
               
chr9:43302486-43301979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 129
               

               
Conread position:
               
244-759
               

               
Cow position:
               
chr9:53530822-53531340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
245-761
               

               
Cow position:
               
chr9:19279345-19278812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
250-740
               

               
Cow position:
               
chr9:33669737-33669244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
377, 452
               

               
Conread position:
               
261-686
               

               
Cow position:
               
chr9:60460380-60459941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
265-761
               

               
Cow position:
               
chr9:16981927-16981422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 102
               

               
Conread position:
               
278-738
               

               
Cow position:
               
chr9:20900131-20900594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
278-758
               

               
Cow position:
               
chr9:30476822-30477287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
224, 16
               

               
Conread position:
               
279-768
               

               
Cow position:
               
chr9:18205231-18205718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 51
               

               
Conread position:
               
281-740
               

               
Cow position:
               
chr9:5575505-5575976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 95
               

               
Conread position:
               
281-761
               

               
Cow position:
               
chr9:33659458-33658979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 32
               

               
Conread position:
               
284-536
               

               
Cow position:
               
chr9:2596480-2596739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
284-710
               

               
Cow position:
               
chr9:3388662-3388229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
285-583
               

               
Cow position:
               
chr9:18007759-18008068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
285-768
               

               
Cow position:
               
chr9:23028868-23028383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
286-651
               

               
Cow position:
               
chr9:53603542-53603167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
286-704
               

               
Cow position:
               
chr9:32738493-32738922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
286-751
               

               
Cow position:
               
chr9:9247068-9247524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 90
               

               
Conread position:
               
286-768
               

               
Cow position:
               
chr9:21742309-21741816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
287-614
               

               
Cow position:
               
chr9:27690309-27689990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
287-655
               

               
Cow position:
               
chr9:29372805-29373168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
289-621
               

               
Cow position:
               
chr9:41918728-41918396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
289-650
               

               
Cow position:
               
chr9:33999403-33999771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
290-503
               

               
Cow position:
               
chr9:9368008-9368215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
116, 73
               

               
Conread position:
               
293-761
               

               
Cow position:
               
chr9:32293392-32293835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
295-761
               

               
Cow position:
               
chr9:27050316-27050795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
297-761
               

               
Cow position:
               
chr9:8163477-8163018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
297-761
               

               
Cow position:
               
chr9:52293651-52294129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
298-760
               

               
Cow position:
               
chr9:28822271-28821802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
298-768
               

               
Cow position:
               
chr9:62401146-62400655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
111, 49
               

               
Conread position:
               
299-740
               

               
Cow position:
               
chr9:5030754-5030306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
299-768
               

               
Cow position:
               
chr9:42696147-42696627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
300-590
               

               
Cow position:
               
chr9:5414875-5414578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
300-666
               

               
Cow position:
               
chr9:6304612-6304991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
300-667
               

               
Cow position:
               
chr9:29106052-29106431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 67
               

               
Conread position:
               
300-768
               

               
Cow position:
               
chr9:47883106-47882627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
301-592
               

               
Cow position:
               
chr9:8386998-8387298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
301-761
               

               
Cow position:
               
chr9:44518519-44518059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
303-599
               

               
Cow position:
               
chr9:49151443-49151145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
303-768
               

               
Cow position:
               
chr9:12378627-12379104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 65
               

               
Conread position:
               
306-761
               

               
Cow position:
               
chr9:10760350-10760795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
306-763
               

               
Cow position:
               
chr9:4862398-4861926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
306-766
               

               
Cow position:
               
chr9:59736805-59737260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
308-547
               

               
Cow position:
               
chr9:35746705-35746475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
309-761
               

               
Cow position:
               
chr9:23836589-23837049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
310-620
               

               
Cow position:
               
chr9:1030535-1030226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
310-651
               

               
Cow position:
               
chr9:17306995-17307347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
178, 57
               

               
Conread position:
               
310-740
               

               
Cow position:
               
chr9:2200778-2201218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
311-592
               

               
Cow position:
               
chr9:26055218-26055508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
311-592
               

               
Cow position:
               
chr9:62074919-62075200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
311-761
               

               
Cow position:
               
chr9:8727533-8727987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
313-651
               

               
Cow position:
               
chr9:32141417-32141756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
313-753
               

               
Cow position:
               
chr9:21228412-21228856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
313-753
               

               
Cow position:
               
chr9:37194234-37193792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
313-761
               

               
Cow position:
               
chr9:11156486-11156027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
313-761
               

               
Cow position:
               
chr9:23540501-23540946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
313-761
               

               
Cow position:
               
chr9:51556157-51556619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 35
               

               
Conread position:
               
314-582
               

               
Cow position:
               
chr9:1740368-1740092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
314-591
               

               
Cow position:
               
chr9:59539100-59539378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
314-667
               

               
Cow position:
               
chr9:199631-199271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
314-713
               

               
Cow position:
               
chr9:11478067-11477658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
314-759
               

               
Cow position:
               
chr9:10326424-10326881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
314-761
               

               
Cow position:
               
chr9:20317618-20318088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
314-761
               

               
Cow position:
               
chr9:42053339-42052886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-761
               

               
Cow position:
               
chr9:42475892-42475437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:216820-216352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:2681679-2682147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:9611696-9611228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:10802864-10803331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:13620806-13620338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:16639465-16639932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:18243792-18243324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:30186897-30187364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:37908038-37908507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:45383417-45383882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:49259316-49258850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:50900445-50899991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:56177065-56177533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
314-768
               

               
Cow position:
               
chr9:58674717-58674244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
315-588
               

               
Cow position:
               
chr9:53056304-53056021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
315-651
               

               
Cow position:
               
chr9:20577956-20578299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
315-651
               

               
Cow position:
               
chr9:20749396-20749051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
315-658
               

               
Cow position:
               
chr9:34676219-34675861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
315-757
               

               
Cow position:
               
chr9:43670046-43670485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
315-761
               

               
Cow position:
               
chr9:27898220-27898676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
316-760
               

               
Cow position:
               
chr9:62630218-62630659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
316-762
               

               
Cow position:
               
chr9:52037544-52038001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
318-746
               

               
Cow position:
               
chr9:16207499-16207937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
318-759
               

               
Cow position:
               
chr9:34554044-34553607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
318-768
               

               
Cow position:
               
chr9:825708-825246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
318-768
               

               
Cow position:
               
chr9:26555281-26555711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
319-740
               

               
Cow position:
               
chr9:22361955-22361532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
319-761
               

               
Cow position:
               
chr9:10665099-10665537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
320-659
               

               
Cow position:
               
chr9:49073866-49073519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
320-749
               

               
Cow position:
               
chr9:9633855-9634295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
320-768
               

               
Cow position:
               
chr9:64054643-64055092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 28
               

               
Conread position:
               
321-759
               

               
Cow position:
               
chr9:61519550-61519988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
322-760
               

               
Cow position:
               
chr9:52724262-52724702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
322-761
               

               
Cow position:
               
chr9:24996560-24997001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
322-768
               

               
Cow position:
               
chr9:23005385-23004938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
322-768
               

               
Cow position:
               
chr9:34688670-34689100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
323-625
               

               
Cow position:
               
chr9:39697243-39696932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
323-768
               

               
Cow position:
               
chr9:59454697-59454240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
324-768
               

               
Cow position:
               
chr9:25701988-25701534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
326-599
               

               
Cow position:
               
chr9:23044077-23043795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
326-759
               

               
Cow position:
               
chr9:9986722-9986294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
326-761
               

               
Cow position:
               
chr9:8951847-8951406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
326-768
               

               
Cow position:
               
chr9:3058415-3057969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
332-761
               

               
Cow position:
               
chr9:9442659-9443100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
332-761
               

               
Cow position:
               
chr9:42957288-42956850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
338-740
               

               
Cow position:
               
chr9:12195240-12194829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
341-607
               

               
Cow position:
               
chr9:11410421-11410691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
347-714
               

               
Cow position:
               
chr9:30020926-30021299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
347-768
               

               
Cow position:
               
chr9:3717587-3718022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
347-768
               

               
Cow position:
               
chr9:9094090-9093655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
348-761
               

               
Cow position:
               
chr9:35592915-35592488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
348-761
               

               
Cow position:
               
chr9:49512590-49512178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
349-768
               

               
Cow position:
               
chr9:2394401-2393966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
350-761
               

               
Cow position:
               
chr9:31078139-31078566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
351-748
               

               
Cow position:
               
chr9:60590018-60590419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
352-603
               

               
Cow position:
               
chr9:10634143-10634404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
363-590
               

               
Cow position:
               
chr9:38346914-38346682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
363-739
               

               
Cow position:
               
chr9:45975097-45974711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
363-761
               

               
Cow position:
               
chr9:28725838-28726232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
46, 188
               

               
Conread position:
               
364-653
               

               
Cow position:
               
chr9:44107312-44107600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
366-748
               

               
Cow position:
               
chr9:31342315-31341917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
366-761
               

               
Cow position:
               
chr9:35225781-35225376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
367-744
               

               
Cow position:
               
chr9:56528460-56528848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
368-768
               

               
Cow position:
               
chr9:13185840-13186238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
375-621
               

               
Cow position:
               
chr9:27107327-27107073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
375-739
               

               
Cow position:
               
chr9:126252-125890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
375-739
               

               
Cow position:
               
chr9:17296847-17296478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
122, 5
               

               
Conread position:
               
375-739
               

               
Cow position:
               
chr9:27313997-27314366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 5
               

               
Conread position:
               
377-651
               

               
Cow position:
               
chr9:25959421-25959136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
380-677
               

               
Cow position:
               
chr9:9752005-9752304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
380-739
               

               
Cow position:
               
chr9:2191954-2192329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
380-759
               

               
Cow position:
               
chr9:52753965-52753573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 171
               

               
Conread position:
               
380-761
               

               
Cow position:
               
chr9:10004624-10004234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 172
               

               
Conread position:
               
380-761
               

               
Cow position:
               
chr9:30891119-30891508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
381-761
               

               
Cow position:
               
chr9:31361916-31361523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
384-758
               

               
Cow position:
               
chr9:37068118-37068500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
23, 160
               

               
Conread position:
               
384-761
               

               
Cow position:
               
chr9:60607883-60608257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
384-768
               

               
Cow position:
               
chr9:29184251-29184649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
386-666
               

               
Cow position:
               
chr9:33124216-33123926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
386-715
               

               
Cow position:
               
chr9:14052516-14052852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
386-761
               

               
Cow position:
               
chr9:14343807-14343426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 168
               

               
Conread position:
               
386-761
               

               
Cow position:
               
chr9:58191637-58192012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
387-761
               

               
Cow position:
               
chr9:3721986-3722375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 168
               

               
Conread position:
               
391-740
               

               
Cow position:
               
chr9:47545919-47546272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
391-760
               

               
Cow position:
               
chr9:48011650-48012020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
391-761
               

               
Cow position:
               
chr9:19380498-19380117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 160
               

               
Conread position:
               
391-761
               

               
Cow position:
               
chr9:44920529-44920915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
391-761
               

               
Cow position:
               
chr9:61130159-61130524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
18, 160
               

               
Conread position:
               
392-710
               

               
Cow position:
               
chr9:9985497-9985154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
392-761
               

               
Cow position:
               
chr9:30803665-30804039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
395-626
               

               
Cow position:
               
chr9:2287926-2287687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
396-761
               

               
Cow position:
               
chr9:23527005-23527377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
404-687
               

               
Cow position:
               
chr9:16206272-16206561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
406-667
               

               
Cow position:
               
chr9:15842416-15842680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 124
               

               
Conread position:
               
406-687
               

               
Cow position:
               
chr9:22583142-22583431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
406-768
               

               
Cow position:
               
chr9:3311571-3311945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 140
               

               
Conread position:
               
406-768
               

               
Cow position:
               
chr9:9260992-9260616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 144
               

               
Conread position:
               
406-768
               

               
Cow position:
               
chr9:29083283-29082908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
407-768
               

               
Cow position:
               
chr9:18381725-18381346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 148
               

               
Conread position:
               
408-680
               

               
Cow position:
               
chr9:7844404-7844120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
87, 142
               

               
Conread position:
               
408-719
               

               
Cow position:
               
chr9:213687-214011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
410-625
               

               
Cow position:
               
chr9:13141732-13141527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
410-736
               

               
Cow position:
               
chr9:9415488-9415822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
71, 131
               

               
Conread position:
               
410-761
               

               
Cow position:
               
chr9:15214798-15215163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
410-761
               

               
Cow position:
               
chr9:23437980-23438334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 140
               

               
Conread position:
               
410-761
               

               
Cow position:
               
chr9:26478415-26478054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
410-767
               

               
Cow position:
               
chr9:34726235-34726603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
70, 142
               

               
Conread position:
               
411-760
               

               
Cow position:
               
chr9:47110527-47110878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
411-761
               

               
Cow position:
               
chr9:59507929-59507569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
413-626
               

               
Cow position:
               
chr9:24725857-24726076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
26, 134
               

               
Conread position:
               
413-652
               

               
Cow position:
               
chr9:6395225-6395475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
414-736
               

               
Cow position:
               
chr9:63966990-63966656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 137
               

               
Conread position:
               
414-740
               

               
Cow position:
               
chr9:25213833-25214160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 139
               

               
Conread position:
               
416-713
               

               
Cow position:
               
chr9:20791904-20791592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
82, 176
               

               
Conread position:
               
417-645
               

               
Cow position:
               
chr9:19592656-19592896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
417-651
               

               
Cow position:
               
chr9:17580417-17580171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 135
               

               
Conread position:
               
417-761
               

               
Cow position:
               
chr9:42172019-42172367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
421-767
               

               
Cow position:
               
chr9:18718386-18718037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
428-645
               

               
Cow position:
               
chr9:59411297-59411520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
431-740
               

               
Cow position:
               
chr9:4676484-4676804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
437-739
               

               
Cow position:
               
chr9:26281380-26281687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
437-761
               

               
Cow position:
               
chr9:52632682-52633017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 111
               

               
Conread position:
               
439-714
               

               
Cow position:
               
chr9:46162331-46162052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
439-761
               

               
Cow position:
               
chr9:44409133-44408801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 111
               

               
Conread position:
               
441-714
               

               
Cow position:
               
chr9:41316998-41317279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 108
               

               
Conread position:
               
441-727
               

               
Cow position:
               
chr9:4631509-4631225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
444-768
               

               
Cow position:
               
chr9:9780615-9780290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
445-761
               

               
Cow position:
               
chr9:20320956-20321281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
446-761
               

               
Cow position:
               
chr9:8234947-8234632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
446-768
               

               
Cow position:
               
chr9:20393304-20393641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 6
               

               
Conread position:
               
446-768
               

               
Cow position:
               
chr9:34524030-34523711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
448-625
               

               
Cow position:
               
chr9:5708056-5707869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
451-692
               

               
Cow position:
               
chr9:1570454-1570206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
452-692
               

               
Cow position:
               
chr9:51314897-51314650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
455-714
               

               
Cow position:
               
chr9:52003228-52003489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
455-761
               

               
Cow position:
               
chr9:29008989-29008682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
459-653
               

               
Cow position:
               
chr9:12461515-12461716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
460-626
               

               
Cow position:
               
chr9:61023610-61023443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
460-759
               

               
Cow position:
               
chr9:8235585-8235893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
461-745
               

               
Cow position:
               
chr9:857722-858014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
462-761
               

               
Cow position:
               
chr9:26992378-26992683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
465-676
               

               
Cow position:
               
chr9:55322495-55322284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
468-768
               

               
Cow position:
               
chr9:1997926-1997620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
470-768
               

               
Cow position:
               
chr9:37017675-37017373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
474-651
               

               
Cow position:
               
chr9:16159861-16160040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
475-651
               

               
Cow position:
               
chr9:19743739-19743555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
482-622
               

               
Cow position:
               
chr9:39971791-39971649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
482-714
               

               
Cow position:
               
chr9:648556-648320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
488-740
               

               
Cow position:
               
chr9:26978234-26978489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
488-759
               

               
Cow position:
               
chr9:52666634-52666906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
489-650
               

               
Cow position:
               
chr9:61644010-61644170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
489-681
               

               
Cow position:
               
chr9:25000002-25000193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
489-684
               

               
Cow position:
               
chr9:36585544-36585748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 37
               

               
Conread position:
               
489-704
               

               
Cow position:
               
chr9:39596537-39596328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
489-740
               

               
Cow position:
               
chr9:37100609-37100856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
489-762
               

               
Cow position:
               
chr9:9822501-9822761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
489-768
               

               
Cow position:
               
chr9:34741856-34742137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
490-761
               

               
Cow position:
               
chr9:5269324-5269055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
491-681
               

               
Cow position:
               
chr9:61845892-61846086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
491-686
               

               
Cow position:
               
chr9:18092910-18093103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
491-740
               

               
Cow position:
               
chr9:635432-635177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
491-740
               

               
Cow position:
               
chr9:63556139-63555883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
491-767
               

               
Cow position:
               
chr9:51592191-51592474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
136, 33
               

               
Conread position:
               
493-620
               

               
Cow position:
               
chr9:61224712-61224584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
493-653
               

               
Cow position:
               
chr9:3597764-3597602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
493-681
               

               
Cow position:
               
chr9:9578262-9578454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 50
               

               
Conread position:
               
493-703
               

               
Cow position:
               
chr9:16181919-16182133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
493-713
               

               
Cow position:
               
chr9:26064503-26064725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
493-714
               

               
Cow position:
               
chr9:41858401-41858176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
493-726
               

               
Cow position:
               
chr9:56746246-56746477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
493-739
               

               
Cow position:
               
chr9:11751065-11750816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
493-739
               

               
Cow position:
               
chr9:22439744-22439994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
493-739
               

               
Cow position:
               
chr9:34015790-34016035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
177, 24
               

               
Conread position:
               
493-744
               

               
Cow position:
               
chr9:35748071-35747816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
493-749
               

               
Cow position:
               
chr9:55341528-55341788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
493-759
               

               
Cow position:
               
chr9:12259872-12259611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:11312745-11313017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:17568909-17568640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:21459392-21459664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:31539501-31539769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:39728262-39727994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:41054216-41054493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:45757127-45756860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:47836158-47836424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:48850873-48850613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr9:63654329-63654609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
493-762
               

               
Cow position:
               
chr9:10354788-10355059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
493-766
               

               
Cow position:
               
chr9:61198162-61197885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
493-768
               

               
Cow position:
               
chr9:5346028-5345752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
493-768
               

               
Cow position:
               
chr9:29835140-29834859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
493-768
               

               
Cow position:
               
chr9:36483657-36483369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
493-768
               

               
Cow position:
               
chr9:64049787-64050072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
494-626
               

               
Cow position:
               
chr9:45472498-45472365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
494-707
               

               
Cow position:
               
chr9:61696946-61696732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
494-712
               

               
Cow position:
               
chr9:2859297-2859077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
494-714
               

               
Cow position:
               
chr9:61237365-61237140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
494-728
               

               
Cow position:
               
chr9:2632847-2633083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
494-732
               

               
Cow position:
               
chr9:64014486-64014245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
494-740
               

               
Cow position:
               
chr9:2676676-2676421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
494-740
               

               
Cow position:
               
chr9:15805158-15805406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
494-740
               

               
Cow position:
               
chr9:36622591-36622839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
494-744
               

               
Cow position:
               
chr9:29329894-29330141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
494-758
               

               
Cow position:
               
chr9:8533526-8533798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:4191696-4191967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:5070362-5070633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 208
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:8738087-8737816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:9120272-9120001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:13158340-13158074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:22732905-22732627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:30649028-30648760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:31587228-31587493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
147, 19
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:48774096-48773828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:50988179-50988447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
494-761
               

               
Cow position:
               
chr9:52407925-52407660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
494-762
               

               
Cow position:
               
chr9:13794399-13794129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
494-766
               

               
Cow position:
               
chr9:29023164-29023438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:1296538-1296258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:3744192-3744473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:10643559-10643279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:15670230-15670510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:19222273-19222553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:22243293-22243013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:29534198-29534478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:54997268-54997554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:56301206-56300936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
494-768
               

               
Cow position:
               
chr9:56531033-56530753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
495-738
               

               
Cow position:
               
chr9:44821546-44821784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
495-761
               

               
Cow position:
               
chr9:29826074-29825807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
495-768
               

               
Cow position:
               
chr9:9311685-9311415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
496-738
               

               
Cow position:
               
chr9:18420139-18419899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
496-739
               

               
Cow position:
               
chr9:58545144-58545380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
496-768
               

               
Cow position:
               
chr9:14003357-14003635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
496-768
               

               
Cow position:
               
chr9:29516507-29516229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
497-761
               

               
Cow position:
               
chr9:49964666-49964397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
497-761
               

               
Cow position:
               
chr9:56898837-56898573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
498-761
               

               
Cow position:
               
chr9:34802360-34802627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
498-768
               

               
Cow position:
               
chr9:44169414-44169690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
499-739
               

               
Cow position:
               
chr9:46682777-46683021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
499-768
               

               
Cow position:
               
chr9:50002690-50002415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
501-760
               

               
Cow position:
               
chr9:19509239-19508980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
502-613
               

               
Cow position:
               
chr9:38679963-38680075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
503-709
               

               
Cow position:
               
chr9:1280331-1280535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
503-709
               

               
Cow position:
               
chr9:3575832-3575623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
504-761
               

               
Cow position:
               
chr9:61762532-61762792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
505-740
               

               
Cow position:
               
chr9:1856032-1855794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
505-741
               

               
Cow position:
               
chr9:34696538-34696778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
506-651
               

               
Cow position:
               
chr9:7389259-7389406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
506-761
               

               
Cow position:
               
chr9:3053482-3053740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
507-687
               

               
Cow position:
               
chr9:6683990-6684174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
507-731
               

               
Cow position:
               
chr9:61297222-61296995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
507-740
               

               
Cow position:
               
chr9:9405272-9405509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
507-740
               

               
Cow position:
               
chr9:22754594-22754370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
507-753
               

               
Cow position:
               
chr9:20901383-20901630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
507-761
               

               
Cow position:
               
chr9:25239021-25238766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
507-767
               

               
Cow position:
               
chr9:22378434-22378179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr9:2715689-2715427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr9:26431777-26431511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr9:34957089-34957355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr9:36025712-36025446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr9:37251405-37251671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr9:44218232-44218499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr9:56564922-56565188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
507-768
               

               
Cow position:
               
chr9:64017824-64017559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
508-761
               

               
Cow position:
               
chr9:9199971-9200225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
508-768
               

               
Cow position:
               
chr9:20320095-20320365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
509-706
               

               
Cow position:
               
chr9:61667357-61667549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
509-737
               

               
Cow position:
               
chr9:41456374-41456605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
509-740
               

               
Cow position:
               
chr9:30162935-30162715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
510-739
               

               
Cow position:
               
chr9:33387325-33387556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
511-739
               

               
Cow position:
               
chr9:27249098-27248868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
512-760
               

               
Cow position:
               
chr9:25617669-25617420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
513-714
               

               
Cow position:
               
chr9:64344069-64344271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
513-761
               

               
Cow position:
               
chr9:19904194-19903944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
513-768
               

               
Cow position:
               
chr9:12717992-12718251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
514-739
               

               
Cow position:
               
chr9:21888936-21888710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
516-760
               

               
Cow position:
               
chr9:27450272-27450035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
516-761
               

               
Cow position:
               
chr9:14798041-14798298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
516-768
               

               
Cow position:
               
chr9:11057524-11057269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
516-768
               

               
Cow position:
               
chr9:53564679-53564935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
517-748
               

               
Cow position:
               
chr9:4213642-4213870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
517-761
               

               
Cow position:
               
chr9:27076517-27076759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
518-739
               

               
Cow position:
               
chr9:52723933-52723702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
518-768
               

               
Cow position:
               
chr9:17871064-17871315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
518-768
               

               
Cow position:
               
chr9:34307985-34307731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
519-761
               

               
Cow position:
               
chr9:2119301-2119536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
522-761
               

               
Cow position:
               
chr9:50520025-50519784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
522-761
               

               
Cow position:
               
chr9:54438571-54438339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
522-768
               

               
Cow position:
               
chr9:38960690-38960947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
523-671
               

               
Cow position:
               
chr9:10148992-10149142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
523-744
               

               
Cow position:
               
chr9:41958379-41958166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
523-748
               

               
Cow position:
               
chr9:2482558-2482332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
523-761
               

               
Cow position:
               
chr9:22319111-22318870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
526-768
               

               
Cow position:
               
chr9:16217914-16218159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
527-768
               

               
Cow position:
               
chr9:58252293-58252048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
529-758
               

               
Cow position:
               
chr9:2708065-2707834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
529-761
               

               
Cow position:
               
chr9:23000421-23000655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
529-761
               

               
Cow position:
               
chr9:64105725-64105490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
534-739
               

               
Cow position:
               
chr9:32688043-32688245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 99
               

               
Conread position:
               
535-761
               

               
Cow position:
               
chr9:2978237-2978009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
535-768
               

               
Cow position:
               
chr9:17879352-17879590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
536-761
               

               
Cow position:
               
chr9:25764852-25764625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
536-767
               

               
Cow position:
               
chr9:9459091-9458854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 213
               

               
Conread position:
               
537-768
               

               
Cow position:
               
chr9:30118763-30118527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
538-768
               

               
Cow position:
               
chr9:46875391-46875156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
540-761
               

               
Cow position:
               
chr9:53607673-53607896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
541-758
               

               
Cow position:
               
chr9:11973082-11973302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
541-768
               

               
Cow position:
               
chr9:2596962-2597190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
541-768
               

               
Cow position:
               
chr9:26380479-26380247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
542-761
               

               
Cow position:
               
chr9:5500399-5500181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 119
               

               
Conread position:
               
542-761
               

               
Cow position:
               
chr9:11523719-11523936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
542-761
               

               
Cow position:
               
chr9:38728812-38728590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
542-765
               

               
Cow position:
               
chr9:48068652-48068878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 103
               

               
Conread position:
               
543-740
               

               
Cow position:
               
chr9:11744242-11744043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 129
               

               
Conread position:
               
543-762
               

               
Cow position:
               
chr9:16252324-16252544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 6
               

               
Conread position:
               
544-714
               

               
Cow position:
               
chr9:16812916-16812740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
544-740
               

               
Cow position:
               
chr9:62906775-62906973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
544-761
               

               
Cow position:
               
chr9:12336684-12336468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 13
               

               
Conread position:
               
545-761
               

               
Cow position:
               
chr9:10284341-10284122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
546-761
               

               
Cow position:
               
chr9:35746068-35745855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 5
               

               
Conread position:
               
546-768
               

               
Cow position:
               
chr9:19539814-19539584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
547-714
               

               
Cow position:
               
chr9:13221193-13221361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
547-739
               

               
Cow position:
               
chr9:29361725-29361919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
547-760
               

               
Cow position:
               
chr9:50206850-50206627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 175
               

               
Conread position:
               
549-768
               

               
Cow position:
               
chr9:26518121-26518345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
550-681
               

               
Cow position:
               
chr9:3222095-3221961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
550-768
               

               
Cow position:
               
chr9:26115141-26115363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 157
               

               
Conread position:
               
550-768
               

               
Cow position:
               
chr9:44914398-44914625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
551-761
               

               
Cow position:
               
chr9:18343685-18343472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
551-768
               

               
Cow position:
               
chr9:21279936-21279718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
552-760
               

               
Cow position:
               
chr9:5161363-5161570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 170
               

               
Conread position:
               
553-738
               

               
Cow position:
               
chr9:41999552-41999739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 106
               

               
Conread position:
               
553-767
               

               
Cow position:
               
chr9:48755426-48755643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
553-768
               

               
Cow position:
               
chr9:29625084-29625304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
553-768
               

               
Cow position:
               
chr9:50694648-50694868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
554-713
               

               
Cow position:
               
chr9:64453409-64453573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
554-715
               

               
Cow position:
               
chr9:34092688-34092851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
555-740
               

               
Cow position:
               
chr9:1950620-1950432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
555-768
               

               
Cow position:
               
chr9:11841717-11841501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
73, 108
               

               
Conread position:
               
556-768
               

               
Cow position:
               
chr9:49220789-49220572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
557-761
               

               
Cow position:
               
chr9:20848672-20848465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
558-761
               

               
Cow position:
               
chr9:26171407-26171613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
562-768
               

               
Cow position:
               
chr9:241152-240941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
563-768
               

               
Cow position:
               
chr9:32229244-32229034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
566-761
               

               
Cow position:
               
chr9:4859243-4859048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
569-740
               

               
Cow position:
               
chr9:40326857-40327031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
569-745
               

               
Cow position:
               
chr9:56253623-56253443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
569-762
               

               
Cow position:
               
chr9:15241289-15241485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
569-768
               

               
Cow position:
               
chr9:35129517-35129313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
570-768
               

               
Cow position:
               
chr9:47087903-47088106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
571-768
               

               
Cow position:
               
chr9:10918859-10919061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
571-768
               

               
Cow position:
               
chr9:12545552-12545754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
574-761
               

               
Cow position:
               
chr9:8601052-8600862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
576-710
               

               
Cow position:
               
chr9:10319162-10319301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
577-713
               

               
Cow position:
               
chr9:36088957-36089096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
577-761
               

               
Cow position:
               
chr9:32813017-32812832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
577-761
               

               
Cow position:
               
chr9:34310726-34310540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
577-761
               

               
Cow position:
               
chr9:47448304-47448120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
577-768
               

               
Cow position:
               
chr9:49872986-49872790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 153
               

               
Conread position:
               
577-768
               

               
Cow position:
               
chr9:56530091-56529895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
577-768
               

               
Cow position:
               
chr9:56531540-56531344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
578-744
               

               
Cow position:
               
chr9:33942186-33942017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
581-761
               

               
Cow position:
               
chr9:18215171-18215353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
585-761
               

               
Cow position:
               
chr9:8741369-8741197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
586-761
               

               
Cow position:
               
chr9:8612975-8612804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
591-740
               

               
Cow position:
               
chr9:49301847-49301697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
594-759
               

               
Cow position:
               
chr9:33026053-33026217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
596-737
               

               
Cow position:
               
chr9:8405769-8405913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
599-759
               

               
Cow position:
               
chr9:28657296-28657133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               
Show alignments to all cow chromosomes.