Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051N03.3 |
| Conread position: | 57-284 |
| Cow position: | chr3:68887378-68887603 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 57-285 |
| Cow position: | chr3:68657970-68658198 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-285 |
| Cow position: | chr3:68687632-68687860 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-285 |
| Cow position: | chr3:68726400-68726629 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 61, 44 |
| Conread position: | 62-285 |
| Cow position: | chr3:68645664-68645887 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-277 |
| Cow position: | chr3:68674008-68674164 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 133 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 274-426 |
| Cow position: | chr3:68688026-68688179 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 278-426 |
| Cow position: | chr3:68658345-68658493 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-426 |
| Cow position: | chr3:68646043-68646189 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 283-426 |
| Cow position: | chr3:68674336-68674479 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 525-726 |
| Cow position: | chr3:68658874-68659074 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 525-726 |
| Cow position: | chr3:68674857-68675058 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 525-726 |
| Cow position: | chr3:68689115-68689313 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 525-726 |
| Cow position: | chr3:68721227-68721428 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 525-726 |
| Cow position: | chr3:68727325-68727526 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 527-726 |
| Cow position: | chr3:68646582-68646781 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 727-895 |
| Cow position: | chr3:68675257-68675422 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 728-897 |
| Cow position: | chr3:68646973-68647142 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 728-897 |
| Cow position: | chr3:68659271-68659440 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 728-897 |
| Cow position: | chr3:68689516-68689685 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 728-897 |
| Cow position: | chr3:68721628-68721797 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 728-897 |
| Cow position: | chr3:68727657-68727828 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 146 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 95, 51 |
| Conread position: | 882-997 |
| Cow position: | chr3:68659700-68659813 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 882-997 |
| Cow position: | chr3:68722055-68722168 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 894-997 |
| Cow position: | chr3:68675693-68675796 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 69 |
| Conread position: | 1004-1157 |
| Cow position: | chr3:68728374-68728518 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1012-1157 |
| Cow position: | chr3:68722345-68722490 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.