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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8052C04.5.5
        

               
Conread position:
               
1066-1285
               

               
Cow position:
               
chr11:54316642-54316860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 176
               

               
Conread position:
               
1078-1305
               

               
Cow position:
               
chr11:1123239-1123007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
1079-1289
               

               
Cow position:
               
chr11:40492022-40492230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
1079-1290
               

               
Cow position:
               
chr11:15406830-15406607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
1079-1290
               

               
Cow position:
               
chr11:51422392-51422181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
1079-1290
               

               
Cow position:
               
chr11:72382422-72382210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
1081-1231
               

               
Cow position:
               
chr11:68276530-68276683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1081-1248
               

               
Cow position:
               
chr11:32797981-32797813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
1081-1257
               

               
Cow position:
               
chr11:68431829-68431658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
1081-1271
               

               
Cow position:
               
chr11:4051855-4051664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
1081-1273
               

               
Cow position:
               
chr11:19892091-19891890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
1081-1285
               

               
Cow position:
               
chr11:9969759-9969561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:18694472-18694683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:23054718-23054927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:24210942-24211159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:26051003-26050790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:45459795-45459582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:45839129-45838920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:54676778-54676988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:55316315-55316535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:56391812-56392022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:66558214-66558416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr11:81268752-81268544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 179
               

               
Conread position:
               
1081-1289
               

               
Cow position:
               
chr11:3777085-3777294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
1081-1289
               

               
Cow position:
               
chr11:54466852-54467053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
1081-1290
               

               
Cow position:
               
chr11:22998294-22998509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
1081-1293
               

               
Cow position:
               
chr11:81652625-81652408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
1081-1323
               

               
Cow position:
               
chr11:72720026-72720273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 193
               

               
Conread position:
               
1082-1257
               

               
Cow position:
               
chr11:1599836-1600009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 93
               

               
Conread position:
               
1082-1284
               

               
Cow position:
               
chr11:58913254-58913051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
1082-1285
               

               
Cow position:
               
chr11:9073346-9073554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
1082-1290
               

               
Cow position:
               
chr11:1503666-1503451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
1082-1304
               

               
Cow position:
               
chr11:52248428-52248654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 169
               

               
Conread position:
               
1082-1308
               

               
Cow position:
               
chr11:2346313-2346529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
1084-1288
               

               
Cow position:
               
chr11:15436874-15437075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
1084-1288
               

               
Cow position:
               
chr11:24202142-24202352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
1084-1290
               

               
Cow position:
               
chr11:3271974-3272179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
1085-1233
               

               
Cow position:
               
chr11:81454490-81454338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1085-1259
               

               
Cow position:
               
chr11:68414992-68414818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
1085-1268
               

               
Cow position:
               
chr11:51168599-51168411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 141
               

               
Conread position:
               
1085-1285
               

               
Cow position:
               
chr11:19536462-19536269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr11:10120536-10120327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr11:22882797-22883001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
166, 50
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr11:34609479-34609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr11:54092436-54092644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 193
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr11:61485246-61485038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr11:76665632-76665424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr11:84807453-84807251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr11:84953558-84953761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
1085-1519
               

               
Cow position:
               
chr11:22875717-22875269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
1087-1288
               

               
Cow position:
               
chr11:61458119-61457924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
1087-1518
               

               
Cow position:
               
chr11:17765158-17764722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 188
               

               
Conread position:
               
1089-1285
               

               
Cow position:
               
chr11:81606503-81606704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
1089-1288
               

               
Cow position:
               
chr11:50824116-50824319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
1089-1288
               

               
Cow position:
               
chr11:54595536-54595738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
170, 106
               

               
Conread position:
               
1089-1290
               

               
Cow position:
               
chr11:10758173-10757967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
1089-1297
               

               
Cow position:
               
chr11:15249155-15248942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
1090-1257
               

               
Cow position:
               
chr11:40506573-40506404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1090-1284
               

               
Cow position:
               
chr11:44879358-44879165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 13
               

               
Conread position:
               
1090-1285
               

               
Cow position:
               
chr11:11319027-11318835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
1090-1285
               

               
Cow position:
               
chr11:34644857-34645060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
1090-1285
               

               
Cow position:
               
chr11:35761219-35761024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr11:7489587-7489787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr11:15889168-15888972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr11:23230298-23230495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
165, 142
               

               
Conread position:
               
1090-1290
               

               
Cow position:
               
chr11:58840516-58840706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
1090-1293
               

               
Cow position:
               
chr11:72757514-72757724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1090-1301
               

               
Cow position:
               
chr11:54509380-54509592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
1091-1273
               

               
Cow position:
               
chr11:76003000-76002811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1091-1277
               

               
Cow position:
               
chr11:35413670-35413490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
158, 12
               

               
Conread position:
               
1091-1285
               

               
Cow position:
               
chr11:28022789-28022985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 143
               

               
Conread position:
               
1091-1288
               

               
Cow position:
               
chr11:50462227-50462431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 147
               

               
Conread position:
               
1091-1288
               

               
Cow position:
               
chr11:54126797-54126592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 107
               

               
Conread position:
               
1091-1291
               

               
Cow position:
               
chr11:53921912-53922114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
1091-1300
               

               
Cow position:
               
chr11:22547563-22547771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
1093-1285
               

               
Cow position:
               
chr11:24030361-24030554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
1093-1289
               

               
Cow position:
               
chr11:21938075-21937874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
1093-1519
               

               
Cow position:
               
chr11:41573278-41573714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
96, 133
               

               
Conread position:
               
1094-1291
               

               
Cow position:
               
chr11:41780818-41781018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
135, 88
               

               
Conread position:
               
1095-1269
               

               
Cow position:
               
chr11:39491082-39491266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1095-1288
               

               
Cow position:
               
chr11:36115217-36115024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 178
               

               
Conread position:
               
1095-1289
               

               
Cow position:
               
chr11:49486307-49486509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 180
               

               
Conread position:
               
1096-1253
               

               
Cow position:
               
chr11:51197033-51197189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1096-1271
               

               
Cow position:
               
chr11:77029790-77029967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
1096-1284
               

               
Cow position:
               
chr11:63144317-63144127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
155, 13
               

               
Conread position:
               
1096-1285
               

               
Cow position:
               
chr11:62202107-62201914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr11:12939639-12939832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr11:29328452-29328258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
157, 67
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr11:29655433-29655630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
95, 176
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr11:35258705-35258511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr11:36237855-36237660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 125
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr11:50700972-50701167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr11:54460733-54460919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr11:68594739-68594934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
141, 161
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr11:76497144-76496952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
1096-1292
               

               
Cow position:
               
chr11:24225635-24225443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
1096-1294
               

               
Cow position:
               
chr11:37663700-37663491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1096-1299
               

               
Cow position:
               
chr11:22957901-22958106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
1096-1301
               

               
Cow position:
               
chr11:22016963-22016750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
1096-1314
               

               
Cow position:
               
chr11:35895112-35894899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
1097-1239
               

               
Cow position:
               
chr11:18731635-18731777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
1097-1288
               

               
Cow position:
               
chr11:53203760-53203955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 133
               

               
Conread position:
               
1097-1288
               

               
Cow position:
               
chr11:61295187-61294999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
1097-1290
               

               
Cow position:
               
chr11:65484543-65484345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1098-1290
               

               
Cow position:
               
chr11:46929054-46929247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
1099-1285
               

               
Cow position:
               
chr11:61207244-61207061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
152, 50
               

               
Conread position:
               
1099-1288
               

               
Cow position:
               
chr11:17150997-17150804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
1099-1291
               

               
Cow position:
               
chr11:50267944-50268140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
1101-1288
               

               
Cow position:
               
chr11:54431472-54431658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
1102-1283
               

               
Cow position:
               
chr11:13433522-13433703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
150, 57
               

               
Conread position:
               
1102-1288
               

               
Cow position:
               
chr11:4760166-4760353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
1102-1288
               

               
Cow position:
               
chr11:48294036-48294224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1102-1288
               

               
Cow position:
               
chr11:49982749-49982938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
1102-1288
               

               
Cow position:
               
chr11:73839720-73839909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
149, 180
               

               
Conread position:
               
1102-1288
               

               
Cow position:
               
chr11:74118172-74117988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
1102-1290
               

               
Cow position:
               
chr11:60699456-60699645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
145, 134
               

               
Conread position:
               
1102-1298
               

               
Cow position:
               
chr11:46106405-46106597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
185, 130
               

               
Conread position:
               
1102-1298
               

               
Cow position:
               
chr11:46115491-46115299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
185, 130
               

               
Conread position:
               
1102-1301
               

               
Cow position:
               
chr11:39994494-39994293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
129, 179
               

               
Conread position:
               
1103-1226
               

               
Cow position:
               
chr11:47566327-47566203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
1103-1231
               

               
Cow position:
               
chr11:4628954-4629082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1103-1284
               

               
Cow position:
               
chr11:32866318-32866132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 178
               

               
Conread position:
               
1103-1285
               

               
Cow position:
               
chr11:66308031-66307845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1103-1286
               

               
Cow position:
               
chr11:63595748-63595568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
1103-1288
               

               
Cow position:
               
chr11:16816950-16817138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1103-1288
               

               
Cow position:
               
chr11:55487446-55487632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
149, 86
               

               
Conread position:
               
1103-1288
               

               
Cow position:
               
chr11:76675689-76675877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
1103-1291
               

               
Cow position:
               
chr11:33987877-33987686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
1103-1299
               

               
Cow position:
               
chr11:20427974-20428173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
1103-1300
               

               
Cow position:
               
chr11:76654321-76654523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
1103-1309
               

               
Cow position:
               
chr11:17113000-17112787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
119, 140
               

               
Conread position:
               
1103-1519
               

               
Cow position:
               
chr11:22922895-22922462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 239
               

               
Conread position:
               
1103-1548
               

               
Cow position:
               
chr11:43390760-43391199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 81
               

               
Conread position:
               
1104-1284
               

               
Cow position:
               
chr11:55081751-55081935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
1104-1285
               

               
Cow position:
               
chr11:62202187-62202368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
1104-1288
               

               
Cow position:
               
chr11:45564210-45564024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
8, 173
               

               
Conread position:
               
1104-1297
               

               
Cow position:
               
chr11:57149341-57149535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
137, 96
               

               
Conread position:
               
1109-1251
               

               
Cow position:
               
chr11:17157328-17157470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1109-1285
               

               
Cow position:
               
chr11:60400374-60400554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
1109-1288
               

               
Cow position:
               
chr11:50718442-50718625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1110-1288
               

               
Cow position:
               
chr11:13533565-13533382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 159
               

               
Conread position:
               
1111-1273
               

               
Cow position:
               
chr11:79532626-79532789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
1111-1288
               

               
Cow position:
               
chr11:26656188-26656366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
1111-1293
               

               
Cow position:
               
chr11:3367027-3366846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
140, 65
               

               
Conread position:
               
1116-1288
               

               
Cow position:
               
chr11:55650102-55649937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
1117-1296
               

               
Cow position:
               
chr11:61666495-61666676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
134, 59
               

               
Conread position:
               
1117-1304
               

               
Cow position:
               
chr11:34268646-34268838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
1118-1288
               

               
Cow position:
               
chr11:54327339-54327515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
1118-1292
               

               
Cow position:
               
chr11:8231274-8231451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
133, 83
               

               
Conread position:
               
1119-1288
               

               
Cow position:
               
chr11:34915418-34915590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
1119-1291
               

               
Cow position:
               
chr11:15470197-15470367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
135, 146
               

               
Conread position:
               
1123-1271
               

               
Cow position:
               
chr11:23909117-23909269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1125-1290
               

               
Cow position:
               
chr11:72982459-72982627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
1127-1287
               

               
Cow position:
               
chr11:15941757-15941594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
1127-1288
               

               
Cow position:
               
chr11:12518844-12518680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
1135-1288
               

               
Cow position:
               
chr11:24109626-24109783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
1136-1288
               

               
Cow position:
               
chr11:20482687-20482842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1138-1288
               

               
Cow position:
               
chr11:51131607-51131758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 138
               

               
Conread position:
               
1139-1288
               

               
Cow position:
               
chr11:19488454-19488300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
1141-1290
               

               
Cow position:
               
chr11:14720478-14720333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
1142-1290
               

               
Cow position:
               
chr11:15910120-15909964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1150-1288
               

               
Cow position:
               
chr11:11175273-11175415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
1156-1290
               

               
Cow position:
               
chr11:53585253-53585391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1180-1545
               

               
Cow position:
               
chr11:13453798-13453428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
1191-1544
               

               
Cow position:
               
chr11:15701677-15701310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
1211-1522
               

               
Cow position:
               
chr11:81652167-81651862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
1240-1523
               

               
Cow position:
               
chr11:75992465-75992193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
1242-1511
               

               
Cow position:
               
chr11:53922121-53922386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
1267-1520
               

               
Cow position:
               
chr11:19488285-19488016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
1271-1500
               

               
Cow position:
               
chr11:22593152-22592918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
1271-1508
               

               
Cow position:
               
chr11:1765009-1764774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
1271-1519
               

               
Cow position:
               
chr11:61200690-61200936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
1271-1519
               

               
Cow position:
               
chr11:79023408-79023653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
1271-1520
               

               
Cow position:
               
chr11:53203992-53204239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
1271-1522
               

               
Cow position:
               
chr11:2346535-2346801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 198
               

               
Conread position:
               
1271-1528
               

               
Cow position:
               
chr11:58794281-58794538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
1273-1540
               

               
Cow position:
               
chr11:42158660-42158396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
1279-1489
               

               
Cow position:
               
chr11:43291438-43291222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
1284-1528
               

               
Cow position:
               
chr11:10120276-10120036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
1287-1510
               

               
Cow position:
               
chr11:3609855-3610079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
1288-1528
               

               
Cow position:
               
chr11:83060815-83060568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
1288-1534
               

               
Cow position:
               
chr11:81857437-81857678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
1288-1535
               

               
Cow position:
               
chr11:56238830-56238581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
1288-1536
               

               
Cow position:
               
chr11:40612356-40612118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
1288-1541
               

               
Cow position:
               
chr11:19812350-19812098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
1288-1542
               

               
Cow position:
               
chr11:35760966-35760726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1291-1512
               

               
Cow position:
               
chr11:84212857-84212633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
1291-1540
               

               
Cow position:
               
chr11:9969501-9969249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
1291-1548
               

               
Cow position:
               
chr11:22556661-22556916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
1294-1546
               

               
Cow position:
               
chr11:47656357-47656619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1295-1512
               

               
Cow position:
               
chr11:76665369-76665158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
1295-1516
               

               
Cow position:
               
chr11:35959760-35959982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
1295-1519
               

               
Cow position:
               
chr11:54994779-54994564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
1295-1547
               

               
Cow position:
               
chr11:69613646-69613396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
1300-1519
               

               
Cow position:
               
chr11:15313678-15313463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
1301-1535
               

               
Cow position:
               
chr11:67289719-67289944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
1305-1512
               

               
Cow position:
               
chr11:29950023-29949813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
1312-1539
               

               
Cow position:
               
chr11:54327647-54327867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 57
               

               
Conread position:
               
1314-1541
               

               
Cow position:
               
chr11:40571200-40571421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
1324-1519
               

               
Cow position:
               
chr11:4194235-4194428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
1324-1544
               

               
Cow position:
               
chr11:80286538-80286325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1331-1548
               

               
Cow position:
               
chr11:55251030-55250813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
1337-1546
               

               
Cow position:
               
chr11:67393108-67392905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
1344-1533
               

               
Cow position:
               
chr11:74186529-74186717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
1345-1530
               

               
Cow position:
               
chr11:81390610-81390799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1346-1523
               

               
Cow position:
               
chr11:54677094-54677275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
1352-1537
               

               
Cow position:
               
chr11:46929416-46929601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 122
               

               
Conread position:
               
1356-1535
               

               
Cow position:
               
chr11:19796749-19796924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
1357-1528
               

               
Cow position:
               
chr11:34915854-34916028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
1358-1531
               

               
Cow position:
               
chr11:16650039-16649862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1358-1532
               

               
Cow position:
               
chr11:2322050-2321876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
1358-1534
               

               
Cow position:
               
chr11:68595060-68595232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 85
               

               
Conread position:
               
1358-1536
               

               
Cow position:
               
chr11:17199648-17199467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1358-1543
               

               
Cow position:
               
chr11:52310568-52310379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1359-1516
               

               
Cow position:
               
chr11:55316650-55316810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
1359-1518
               

               
Cow position:
               
chr11:13622127-13622288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
1359-1522
               

               
Cow position:
               
chr11:23151911-23151753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 40
               

               
Conread position:
               
1359-1528
               

               
Cow position:
               
chr11:65234651-65234473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
1359-1537
               

               
Cow position:
               
chr11:30318827-30319007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
1359-1540
               

               
Cow position:
               
chr11:41083223-41083038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
1360-1520
               

               
Cow position:
               
chr11:15909840-15909677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 92
               

               
Conread position:
               
1360-1528
               

               
Cow position:
               
chr11:64050538-64050370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
1360-1541
               

               
Cow position:
               
chr11:21619848-21619674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
1361-1519
               

               
Cow position:
               
chr11:9385251-9385094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 147
               

               
Conread position:
               
1361-1523
               

               
Cow position:
               
chr11:9560407-9560237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
1362-1534
               

               
Cow position:
               
chr11:2620709-2620879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
1362-1542
               

               
Cow position:
               
chr11:64883493-64883312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
1363-1536
               

               
Cow position:
               
chr11:40493480-40493655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
1371-1512
               

               
Cow position:
               
chr11:2867572-2867711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1371-1519
               

               
Cow position:
               
chr11:75976053-75975903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1371-1535
               

               
Cow position:
               
chr11:11253864-11253697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1371-1536
               

               
Cow position:
               
chr11:9898582-9898748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1371-1543
               

               
Cow position:
               
chr11:15888823-15888654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
1371-1544
               

               
Cow position:
               
chr11:54509707-54509876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
1376-1544
               

               
Cow position:
               
chr11:2840671-2840842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1382-1518
               

               
Cow position:
               
chr11:23272546-23272410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
1382-1536
               

               
Cow position:
               
chr11:32797468-32797315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
1382-1547
               

               
Cow position:
               
chr11:56069864-56069698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
1386-1528
               

               
Cow position:
               
chr11:77026420-77026279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
1388-1532
               

               
Cow position:
               
chr11:54146599-54146744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 123
               

               
Conread position:
               
1397-1537
               

               
Cow position:
               
chr11:54038881-54039022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1403-1519
               

               
Cow position:
               
chr11:56392182-56392298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1406-1511
               

               
Cow position:
               
chr11:33955008-33955115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               
Show alignments to all cow chromosomes.